data_Y7W
# 
_chem_comp.id                                    Y7W 
_chem_comp.name                                  pirtobrutinib 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H21 F4 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "5-amino-3-{4-[(5-fluoro-2-methoxybenzamido)methyl]phenyl}-1-[(2S)-1,1,1-trifluoropropan-2-yl]-1H-pyrazole-4-carboxamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-11 
_chem_comp.pdbx_modified_date                    2023-02-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        479.427 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y7W 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FLL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y7W N3  N1  N 0 1 N N N -21.311 1.705  1.087  -3.086 -3.269 2.252  N3  Y7W 1  
Y7W C4  C1  C 0 1 Y N N -22.945 3.479  1.193  -3.794 -1.524 0.705  C4  Y7W 2  
Y7W C5  C2  C 0 1 Y N N -23.945 3.056  0.270  -2.842 -0.557 0.144  C5  Y7W 3  
Y7W C6  C3  C 0 1 Y N N -24.187 1.739  -0.344 -1.427 -0.820 -0.211 C6  Y7W 4  
Y7W C7  C4  C 0 1 Y N N -24.288 0.588  0.433  -0.852 -0.187 -1.312 C7  Y7W 5  
Y7W C8  C5  C 0 1 Y N N -24.553 -0.641 -0.154 0.465  -0.435 -1.637 C8  Y7W 6  
Y7W C10 C6  C 0 1 N N N -25.023 -2.095 -2.147 2.655  -1.578 -1.235 C10 Y7W 7  
Y7W C13 C7  C 0 1 Y N N -23.874 -3.077 -5.618 5.723  0.300  -0.016 C13 Y7W 8  
Y7W C15 C8  C 0 1 Y N N -23.727 -3.902 -7.844 5.986  2.160  1.483  C15 Y7W 9  
Y7W C17 C9  C 0 1 Y N N -22.369 -3.816 -7.859 7.360  2.109  1.305  C17 Y7W 10 
Y7W C21 C10 C 0 1 N N N -20.500 -2.246 -4.476 9.087  -0.669 -1.139 C21 Y7W 11 
Y7W C24 C11 C 0 1 Y N N -24.325 1.621  -1.723 -0.664 -1.698 0.558  C24 Y7W 12 
Y7W C28 C12 C 0 1 N N N -25.398 6.830  -0.583 -5.333 2.645  1.349  C28 Y7W 13 
Y7W O1  O1  O 0 1 N N N -21.115 3.311  2.646  -3.723 -3.792 0.189  O1  Y7W 14 
Y7W C2  C13 C 0 1 N N N -21.751 2.800  1.713  -3.534 -2.930 1.027  C2  Y7W 15 
Y7W C9  C14 C 0 1 Y N N -24.712 -0.755 -1.523 1.216  -1.311 -0.874 C9  Y7W 16 
Y7W N11 N2  N 0 1 N N N -24.238 -2.343 -3.349 3.518  -0.618 -0.541 N11 Y7W 17 
Y7W C12 C15 C 0 1 N N N -24.800 -2.767 -4.485 4.854  -0.667 -0.714 C12 Y7W 18 
Y7W C14 C16 C 0 1 Y N N -24.505 -3.559 -6.769 5.166  1.262  0.829  C14 Y7W 19 
Y7W F16 F1  F 0 1 N N N -24.352 -4.374 -8.949 5.447  3.091  2.301  F16 Y7W 20 
Y7W C18 C17 C 0 1 Y N N -21.733 -3.343 -6.726 7.921  1.166  0.467  C18 Y7W 21 
Y7W C19 C18 C 0 1 Y N N -22.478 -2.976 -5.616 7.113  0.253  -0.193 C19 Y7W 22 
Y7W O20 O2  O 0 1 N N N -21.909 -2.475 -4.477 7.665  -0.682 -1.007 O20 Y7W 23 
Y7W O22 O3  O 0 1 N N N -26.026 -2.917 -4.609 5.342  -1.506 -1.445 O22 Y7W 24 
Y7W C23 C19 C 0 1 Y N N -24.582 0.390  -2.301 0.653  -1.939 0.223  C23 Y7W 25 
Y7W N25 N3  N 0 1 Y N N -24.836 4.021  0.066  -3.479 0.583  0.016  N25 Y7W 26 
Y7W N26 N4  N 0 1 Y N N -24.437 5.071  0.854  -4.796 0.432  0.458  N26 Y7W 27 
Y7W C27 C20 C 0 1 N N S -25.177 6.296  0.825  -5.809 1.489  0.467  C27 Y7W 28 
Y7W C29 C21 C 0 1 N N N -26.481 6.145  1.574  -6.031 1.995  -0.960 C29 Y7W 29 
Y7W F30 F2  F 0 1 N N N -26.276 5.594  2.774  -6.999 3.005  -0.951 F30 Y7W 30 
Y7W F31 F3  F 0 1 N N N -27.069 7.324  1.784  -4.831 2.504  -1.467 F31 Y7W 31 
Y7W F32 F4  F 0 1 N N N -27.360 5.367  0.926  -6.467 0.938  -1.766 F32 Y7W 32 
Y7W C33 C22 C 0 1 Y N N -23.321 4.783  1.553  -4.992 -0.835 0.874  C33 Y7W 33 
Y7W N34 N5  N 0 1 N N N -22.667 5.673  2.363  -6.166 -1.354 1.381  N34 Y7W 34 
Y7W H1  H1  H 0 1 N N N -20.451 1.280  1.369  -2.935 -2.582 2.920  H1  Y7W 35 
Y7W H2  H2  H 0 1 N N N -21.842 1.311  0.337  -2.917 -4.200 2.467  H2  Y7W 36 
Y7W H3  H3  H 0 1 N N N -24.159 0.652  1.503  -1.438 0.497  -1.908 H3  Y7W 37 
Y7W H4  H4  H 0 1 N N N -24.636 -1.521 0.467  0.911  0.055  -2.490 H4  Y7W 38 
Y7W H5  H5  H 0 1 N N N -26.091 -2.123 -2.410 2.923  -2.591 -0.934 H5  Y7W 39 
Y7W H6  H6  H 0 1 N N N -24.805 -2.885 -1.414 2.785  -1.472 -2.312 H6  Y7W 40 
Y7W H7  H7  H 0 1 N N N -21.804 -4.109 -8.731 7.995  2.815  1.820  H7  Y7W 41 
Y7W H8  H8  H 0 1 N N N -20.194 -1.846 -3.498 9.406  0.293  -1.539 H8  Y7W 42 
Y7W H9  H9  H 0 1 N N N -19.974 -3.194 -4.665 9.544  -0.825 -0.162 H9  Y7W 43 
Y7W H10 H10 H 0 1 N N N -20.246 -1.522 -5.264 9.397  -1.465 -1.816 H10 Y7W 44 
Y7W H11 H11 H 0 1 N N N -24.231 2.497  -2.348 -1.102 -2.188 1.415  H11 Y7W 45 
Y7W H12 H12 H 0 1 N N N -25.970 7.768  -0.534 -4.397 3.042  0.954  H12 Y7W 46 
Y7W H13 H13 H 0 1 N N N -24.425 7.018  -1.061 -6.087 3.432  1.356  H13 Y7W 47 
Y7W H14 H14 H 0 1 N N N -25.958 6.089  -1.172 -5.174 2.285  2.366  H14 Y7W 48 
Y7W H15 H15 H 0 1 N N N -23.250 -2.192 -3.323 3.128  0.052  0.042  H15 Y7W 49 
Y7W H16 H16 H 0 1 N N N -25.580 -3.659 -6.810 4.096  1.305  0.970  H16 Y7W 50 
Y7W H17 H17 H 0 1 N N N -20.656 -3.260 -6.706 8.992  1.132  0.333  H17 Y7W 51 
Y7W H18 H18 H 0 1 N N N -24.683 0.318  -3.374 1.245  -2.618 0.818  H18 Y7W 52 
Y7W H19 H19 H 0 1 N N N -24.589 7.055  1.361  -6.745 1.093  0.862  H19 Y7W 53 
Y7W H20 H20 H 0 1 N N N -21.870 5.229  2.772  -6.206 -2.282 1.658  H20 Y7W 54 
Y7W H21 H21 H 0 1 N N N -22.369 6.459  1.822  -6.952 -0.790 1.459  H21 Y7W 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y7W F16 C15 SING N N 1  
Y7W C17 C15 DOUB Y N 2  
Y7W C17 C18 SING Y N 3  
Y7W C15 C14 SING Y N 4  
Y7W C14 C13 DOUB Y N 5  
Y7W C18 C19 DOUB Y N 6  
Y7W C13 C19 SING Y N 7  
Y7W C13 C12 SING N N 8  
Y7W C19 O20 SING N N 9  
Y7W O22 C12 DOUB N N 10 
Y7W C12 N11 SING N N 11 
Y7W O20 C21 SING N N 12 
Y7W N11 C10 SING N N 13 
Y7W C23 C24 DOUB Y N 14 
Y7W C23 C9  SING Y N 15 
Y7W C10 C9  SING N N 16 
Y7W C24 C6  SING Y N 17 
Y7W C9  C8  DOUB Y N 18 
Y7W C28 C27 SING N N 19 
Y7W C6  C5  SING N N 20 
Y7W C6  C7  DOUB Y N 21 
Y7W C8  C7  SING Y N 22 
Y7W N25 C5  DOUB Y N 23 
Y7W N25 N26 SING Y N 24 
Y7W C5  C4  SING Y N 25 
Y7W C27 N26 SING N N 26 
Y7W C27 C29 SING N N 27 
Y7W N26 C33 SING Y N 28 
Y7W F32 C29 SING N N 29 
Y7W N3  C2  SING N N 30 
Y7W C4  C33 DOUB Y N 31 
Y7W C4  C2  SING N N 32 
Y7W C33 N34 SING N N 33 
Y7W C29 F31 SING N N 34 
Y7W C29 F30 SING N N 35 
Y7W C2  O1  DOUB N N 36 
Y7W N3  H1  SING N N 37 
Y7W N3  H2  SING N N 38 
Y7W C7  H3  SING N N 39 
Y7W C8  H4  SING N N 40 
Y7W C10 H5  SING N N 41 
Y7W C10 H6  SING N N 42 
Y7W C17 H7  SING N N 43 
Y7W C21 H8  SING N N 44 
Y7W C21 H9  SING N N 45 
Y7W C21 H10 SING N N 46 
Y7W C24 H11 SING N N 47 
Y7W C28 H12 SING N N 48 
Y7W C28 H13 SING N N 49 
Y7W C28 H14 SING N N 50 
Y7W N11 H15 SING N N 51 
Y7W C14 H16 SING N N 52 
Y7W C18 H17 SING N N 53 
Y7W C23 H18 SING N N 54 
Y7W C27 H19 SING N N 55 
Y7W N34 H20 SING N N 56 
Y7W N34 H21 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y7W SMILES           ACDLabs              12.01 "FC(F)(F)C(C)n1nc(c2ccc(CNC(=O)c3cc(F)ccc3OC)cc2)c(c1N)C(N)=O"                                                                                                                       
Y7W InChI            InChI                1.06  "InChI=1S/C22H21F4N5O3/c1-11(22(24,25)26)31-19(27)17(20(28)32)18(30-31)13-5-3-12(4-6-13)10-29-21(33)15-9-14(23)7-8-16(15)34-2/h3-9,11H,10,27H2,1-2H3,(H2,28,32)(H,29,33)/t11-/m0/s1" 
Y7W InChIKey         InChI                1.06  FWZAWAUZXYCBKZ-NSHDSACASA-N                                                                                                                                                          
Y7W SMILES_CANONICAL CACTVS               3.385 "COc1ccc(F)cc1C(=O)NCc2ccc(cc2)c3nn([C@@H](C)C(F)(F)F)c(N)c3C(N)=O"                                                                                                                  
Y7W SMILES           CACTVS               3.385 "COc1ccc(F)cc1C(=O)NCc2ccc(cc2)c3nn([CH](C)C(F)(F)F)c(N)c3C(N)=O"                                                                                                                    
Y7W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(F)(F)F)n1c(c(c(n1)c2ccc(cc2)CNC(=O)c3cc(ccc3OC)F)C(=O)N)N"                                                                                                                
Y7W SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C(F)(F)F)n1c(c(c(n1)c2ccc(cc2)CNC(=O)c3cc(ccc3OC)F)C(=O)N)N"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y7W "SYSTEMATIC NAME" ACDLabs              12.01 "5-amino-3-{4-[(5-fluoro-2-methoxybenzamido)methyl]phenyl}-1-[(2S)-1,1,1-trifluoropropan-2-yl]-1H-pyrazole-4-carboxamide"                       
Y7W "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-azanyl-3-[4-[[(5-fluoranyl-2-methoxy-phenyl)carbonylamino]methyl]phenyl]-1-[(2~{S})-1,1,1-tris(fluoranyl)propan-2-yl]pyrazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y7W "Create component" 2023-01-11 RCSB 
Y7W "Initial release"  2023-03-01 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      Y7W 
_pdbx_chem_comp_synonyms.name         "5-amino-3-{4-[(5-fluoro-2-methoxybenzamido)methyl]phenyl}-1-[(2S)-1,1,1-trifluoropropan-2-yl]-1H-pyrazole-4-carboxamide" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         IUPAC 
# 
