data_VNW
# 
_chem_comp.id                                    VNW 
_chem_comp.name                                  "8-azanyl-4-methylselanyl-quinoline-2-carboxylic acid" 
_chem_comp.type                                  "peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C11 H10 N2 O2 Se" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        281.169 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VNW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QHM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VNW N   N1  N  0 1 N N N Y Y N 29.761 -13.269 7.617 3.299  -2.492 0.152  N   VNW 1  
VNW CA  C1  C  0 1 Y N N Y N N 25.648 -13.347 6.674 1.528  1.225  -0.028 CA  VNW 2  
VNW C   C2  C  0 1 N N N Y N Y 24.696 -14.423 6.949 2.404  2.419  0.009  C   VNW 3  
VNW O   O1  O  0 1 N N N Y N Y 23.583 -13.975 7.255 1.917  3.530  -0.038 O   VNW 4  
VNW NB  N2  N  0 1 Y N N Y N N 26.901 -13.335 6.997 2.072  0.024  0.029  NB  VNW 5  
VNW CG  C3  C  0 1 Y N N Y N N 27.663 -12.259 6.704 1.325  -1.076 -0.001 CG  VNW 6  
VNW CD  C4  C  0 1 Y N N Y N N 29.062 -12.199 6.999 1.916  -2.360 0.060  CD  VNW 7  
VNW C06 C5  C  0 1 Y N N N N N 27.089 -11.149 6.059 -0.087 -0.973 -0.096 C06 VNW 8  
VNW C07 C6  C  0 1 Y N N N N N 27.844 -10.022 5.712 -0.869 -2.137 -0.126 C07 VNW 9  
VNW C08 C7  C  0 1 Y N N N N N 29.202 -9.921  6.060 -0.271 -3.360 -0.066 C08 VNW 10 
VNW C09 C8  C  0 1 Y N N N N N 29.801 -11.031 6.655 1.112  -3.478 0.027  C09 VNW 11 
VNW C12 C9  C  0 1 Y N N N N N 25.736 -11.125 5.729 -0.679 0.304  -0.157 C12 VNW 12 
VNW C14 C10 C  0 1 N N N N N N 23.201 -9.842  4.562 -3.122 0.578  1.606  C14 VNW 13 
VNW C15 C11 C  0 1 Y N N N N N 24.954 -12.265 6.054 0.138  1.397  -0.116 C15 VNW 14 
VNW SE1 SE1 SE 0 0 N N N N N N 25.082 -9.470  4.883 -2.624 0.507  -0.289 SE1 VNW 15 
VNW H2  H1  H  0 1 N Y N Y Y N 29.126 -14.019 7.803 3.861  -1.702 0.175  H2  VNW 16 
VNW H   H2  H  0 1 N N N Y Y N 30.486 -13.589 7.008 3.700  -3.375 0.198  H   VNW 17 
VNW H07 H6  H  0 1 N N N N N N 27.375 -9.216  5.167 -1.944 -2.065 -0.198 H07 VNW 18 
VNW H08 H7  H  0 1 N N N N N N 29.762 -9.016  5.873 -0.881 -4.252 -0.090 H08 VNW 19 
VNW H09 H8  H  0 1 N N N N N N 30.861 -11.004 6.862 1.562  -4.460 0.073  H09 VNW 20 
VNW H14 H9  H  0 1 N N N N N N 22.731 -8.970  4.084 -2.627 1.426  2.079  H14 VNW 21 
VNW H15 H10 H  0 1 N N N N N N 23.108 -10.716 3.901 -4.202 0.693  1.693  H15 VNW 22 
VNW H16 H11 H  0 1 N N N N N N 22.700 -10.051 5.519 -2.812 -0.344 2.098  H16 VNW 23 
VNW H17 H12 H  0 1 N N N N N N 23.896 -12.311 5.844 -0.284 2.390  -0.157 H17 VNW 24 
VNW OXT OXT O  0 1 N Y N Y N Y 24.908 -15.712 6.824 3.740  2.272  0.093  OXT VNW 25 
VNW HXT HXT H  0 1 N Y N Y N Y 24.103 -16.184 7.001 4.270  3.080  0.114  HXT VNW 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VNW NB  CA  DOUB Y N 1  
VNW CG  NB  SING Y N 2  
VNW C06 CG  DOUB Y N 3  
VNW C08 C07 DOUB Y N 4  
VNW C09 C08 SING Y N 5  
VNW CD  C09 DOUB Y N 6  
VNW N   CD  SING N N 7  
VNW C07 C06 SING Y N 8  
VNW C12 C06 SING Y N 9  
VNW C14 SE1 SING N N 10 
VNW SE1 C12 SING N N 11 
VNW C15 C12 DOUB Y N 12 
VNW CA  C   SING N N 13 
VNW O   C   DOUB N N 14 
VNW CA  C15 SING Y N 15 
VNW CG  CD  SING Y N 16 
VNW N   H2  SING N N 17 
VNW N   H   SING N N 18 
VNW C07 H07 SING N N 19 
VNW C08 H08 SING N N 20 
VNW C09 H09 SING N N 21 
VNW C14 H14 SING N N 22 
VNW C14 H15 SING N N 23 
VNW C14 H16 SING N N 24 
VNW C15 H17 SING N N 25 
VNW C   OXT SING N N 26 
VNW OXT HXT SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VNW InChI            InChI                1.06  "InChI=1S/C11H10N2O2Se/c1-16-9-5-8(11(14)15)13-10-6(9)3-2-4-7(10)12/h2-5H,12H2,1H3,(H,14,15)" 
VNW InChIKey         InChI                1.06  XNDKSZNZLHRFIR-UHFFFAOYSA-N                                                                   
VNW SMILES_CANONICAL CACTVS               3.385 "C[Se]c1cc(nc2c(N)cccc12)C(O)=O"                                                              
VNW SMILES           CACTVS               3.385 "C[Se]c1cc(nc2c(N)cccc12)C(O)=O"                                                              
VNW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[Se]c1cc(nc2c1cccc2N)C(=O)O"                                                                
VNW SMILES           "OpenEye OEToolkits" 2.0.7 "C[Se]c1cc(nc2c1cccc2N)C(=O)O"                                                                
# 
_pdbx_chem_comp_identifier.comp_id           VNW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "8-azanyl-4-methylselanyl-quinoline-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VNW "Create component"         2023-09-14 PDBE 
VNW "Modify linking type"      2023-09-15 PDBE 
VNW "Modify leaving atom flag" 2023-09-18 PDBE 
VNW "Initial release"          2023-10-11 RCSB 
VNW "Modify backbone"          2023-11-03 PDBE 
VNW "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VNW 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
