data_RVW
# 
_chem_comp.id                                    RVW 
_chem_comp.name                                  "(2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-sulfanyl-oxane-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H12 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         thioglucose 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-10-25 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        196.221 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RVW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ARF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RVW C4  C1  C 0 1 N N S N N N 18.566 -16.170 -3.887 -1.518 0.030  0.790  C4  RVW 1  
RVW C5  C2  C 0 1 N N S N N N 17.795 -14.956 -4.369 -0.613 1.258  0.666  C5  RVW 2  
RVW C6  C3  C 0 1 N N N N N N 16.741 -16.082 -7.743 2.710  -0.401 0.327  C6  RVW 3  
RVW C1  C4  C 0 1 N N R N N N 17.670 -17.474 -5.862 0.420  -1.374 0.085  C1  RVW 4  
RVW C2  C5  C 0 1 N N R N N N 17.903 -17.468 -4.348 -1.049 -1.044 -0.197 C2  RVW 5  
RVW C3  C6  C 0 1 N N S N N N 16.932 -16.190 -6.236 1.251  -0.090 -0.012 C3  RVW 6  
RVW O1  O1  O 0 1 N N N N N N 17.672 -15.034 -5.792 0.742  0.875  0.910  O1  RVW 7  
RVW O2  O2  O 0 1 N N N N N N 16.923 -18.614 -6.229 0.889  -2.323 -0.875 O2  RVW 8  
RVW O3  O3  O 0 1 N N N N N N 18.682 -18.590 -3.951 -1.843 -2.221 -0.036 O3  RVW 9  
RVW O4  O4  O 0 1 N N N N N N 18.643 -16.170 -2.465 -2.866 0.398  0.490  O4  RVW 10 
RVW O5  O5  O 0 1 N N N N N N 16.031 -14.900 -8.103 3.506  0.769  0.124  O5  RVW 11 
RVW S1  S1  S 0 1 N N N N N N 16.173 -14.737 -3.592 -0.755 1.949  -1.005 S1  RVW 12 
RVW H9  H1  H 0 1 N N N N N N 19.579 -16.130 -4.313 -1.465 -0.361 1.806  H9  RVW 13 
RVW H10 H2  H 0 1 N N N N N N 18.367 -14.056 -4.101 -0.916 2.008  1.397  H10 RVW 14 
RVW H11 H3  H 0 1 N N N N N N 16.176 -16.958 -8.094 2.783  -0.713 1.369  H11 RVW 15 
RVW H12 H4  H 0 1 N N N N N N 17.729 -16.065 -8.227 3.071  -1.202 -0.318 H12 RVW 16 
RVW H6  H5  H 0 1 N N N N N N 18.647 -17.479 -6.368 0.513  -1.793 1.087  H6  RVW 17 
RVW H7  H6  H 0 1 N N N N N N 16.918 -17.528 -3.862 -1.150 -0.671 -1.216 H7  RVW 18 
RVW H8  H7  H 0 1 N N N N N N 15.942 -16.203 -5.757 1.190  0.306  -1.026 H8  RVW 19 
RVW H2  H8  H 0 1 N N N N N N 17.401 -19.398 -5.987 0.403  -3.159 -0.871 H2  RVW 20 
RVW H3  H9  H 0 1 N N N N N N 18.815 -18.567 -3.011 -2.786 -2.085 -0.199 H3  RVW 21 
RVW H4  H10 H 0 1 N N N N N N 19.127 -16.934 -2.174 -3.228 1.077  1.076  H4  RVW 22 
RVW H5  H11 H 0 1 N N N N N N 15.930 -14.866 -9.047 4.444  0.646  0.320  H5  RVW 23 
RVW H1  H12 H 0 1 N N N N N N 16.482 -14.689 -2.330 0.080  3.003  -0.969 H1  RVW 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RVW O5 C6  SING N N 1  
RVW C6 C3  SING N N 2  
RVW C3 C1  SING N N 3  
RVW C3 O1  SING N N 4  
RVW O2 C1  SING N N 5  
RVW C1 C2  SING N N 6  
RVW O1 C5  SING N N 7  
RVW C5 C4  SING N N 8  
RVW C5 S1  SING N N 9  
RVW C2 O3  SING N N 10 
RVW C2 C4  SING N N 11 
RVW C4 O4  SING N N 12 
RVW C4 H9  SING N N 13 
RVW C5 H10 SING N N 14 
RVW C6 H11 SING N N 15 
RVW C6 H12 SING N N 16 
RVW C1 H6  SING N N 17 
RVW C2 H7  SING N N 18 
RVW C3 H8  SING N N 19 
RVW O2 H2  SING N N 20 
RVW O3 H3  SING N N 21 
RVW O4 H4  SING N N 22 
RVW O5 H5  SING N N 23 
RVW S1 H1  SING N N 24 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RVW InChI            InChI                1.03  "InChI=1S/C6H12O5S/c7-1-2-3(8)4(9)5(10)6(12)11-2/h2-10,12H,1H2/t2-,3-,4+,5-,6-/m0/s1" 
RVW InChIKey         InChI                1.03  JUSMHIGDXPKSID-QYESYBIKSA-N                                                           
RVW SMILES_CANONICAL CACTVS               3.385 "OC[C@@H]1O[C@@H](S)[C@@H](O)[C@H](O)[C@H]1O"                                         
RVW SMILES           CACTVS               3.385 "OC[CH]1O[CH](S)[CH](O)[CH](O)[CH]1O"                                                 
RVW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]1[C@@H]([C@H]([C@@H]([C@@H](O1)S)O)O)O)O"                                     
RVW SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)S)O)O)O)O"                                                            
# 
_pdbx_chem_comp_identifier.comp_id           RVW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-sulfanyl-oxane-3,4,5-triol" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      RVW 
_pdbx_chem_comp_synonyms.name         thioglucose 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RVW "Create component" 2020-10-25 PDBE 
RVW "Initial release"  2020-12-02 RCSB 
RVW "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            RVW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
