data_L1W
#

_chem_comp.id                                   L1W
_chem_comp.name                                 "~{N}-[3-[1-[[4-[5-[(4-hydroxyphenyl)methyl]-6-oxidanylidene-2-phenyl-1~{H}-pyrazin-3-yl]phenyl]methyl]piperidin-4-yl]-2-oxidanylidene-1~{H}-benzimidazol-5-yl]propanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C39 H38 N6 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-15
_chem_comp.pdbx_modified_date                   2019-10-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       654.757
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L1W
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6S9X
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L1W  CAA  C1   C  0  1  N  N  N   1.480  -0.277  15.366  -6.383   0.796   0.918  CAA  L1W   1  
L1W  CAB  C2   C  0  1  N  N  N   2.423  -0.631  16.321  -7.215  -0.262   1.345  CAB  L1W   2  
L1W  CAD  C3   C  0  1  N  N  N   4.018   0.773  15.212  -5.601  -1.781   0.584  CAD  L1W   3  
L1W  CAE  C4   C  0  1  N  N  N   3.043   1.115  14.253  -4.806  -0.710   0.183  CAE  L1W   4  
L1W  CAG  C5   C  0  1  Y  N  N   5.335   1.233  15.235  -5.136  -3.166   0.384  CAG  L1W   5  
L1W  CAH  C6   C  0  1  Y  N  N   3.317   1.998  13.191  -3.490  -0.965  -0.449  CAH  L1W   6  
L1W  CAI  C7   C  0  1  Y  N  N   5.794   1.888  16.370  -5.156  -4.074   1.446  CAI  L1W   7  
L1W  CAJ  C8   C  0  1  Y  N  N   7.105   2.347  16.429  -4.720  -5.368   1.251  CAJ  L1W   8  
L1W  CAK  C9   C  0  1  Y  N  N   7.963   2.138  15.357  -4.264  -5.768   0.007  CAK  L1W   9  
L1W  CAL  C10  C  0  1  Y  N  N   7.507   1.471  14.223  -4.242  -4.874  -1.049  CAL  L1W  10  
L1W  CAM  C11  C  0  1  Y  N  N   6.199   1.011  14.164  -4.679  -3.579  -0.871  CAM  L1W  11  
L1W  CAN  C12  C  0  1  Y  N  N   3.887   3.248  13.426  -3.163  -0.352  -1.657  CAN  L1W  12  
L1W  CAO  C13  C  0  1  Y  N  N   4.168   4.115  12.375  -1.935  -0.593  -2.240  CAO  L1W  13  
L1W  CAP  C14  C  0  1  Y  N  N   3.870   3.769  11.062  -1.031  -1.442  -1.627  CAP  L1W  14  
L1W  CAQ  C15  C  0  1  Y  N  N   3.302   2.523  10.812  -1.350  -2.054  -0.428  CAQ  L1W  15  
L1W  CAR  C16  C  0  1  Y  N  N   3.024   1.652  11.870  -2.572  -1.816   0.167  CAR  L1W  16  
L1W  CAS  C17  C  0  1  N  N  N   4.182   4.663  10.026   0.308  -1.701  -2.269  CAS  L1W  17  
L1W  CAU  C18  C  0  1  N  N  N   2.263   6.007   9.661   1.538  -0.884  -0.351  CAU  L1W  18  
L1W  CAV  C19  C  0  1  N  N  N   1.145   6.409   8.718   2.440   0.248   0.146  CAV  L1W  19  
L1W  CAW  C20  C  0  1  N  N  N   1.720   6.886   7.383   3.758   0.222  -0.633  CAW  L1W  20  
L1W  CAX  C21  C  0  1  N  N  N   2.607   5.802   6.816   3.460   0.353  -2.129  CAX  L1W  21  
L1W  CAY  C22  C  0  1  N  N  N   3.678   5.467   7.841   2.528  -0.781  -2.560  CAY  L1W  22  
L1W  CBA  C23  C  0  1  N  N  N  -0.525   6.704   6.180   4.287   2.644  -0.284  CBA  L1W  23  
L1W  CBC  C24  C  0  1  Y  N  N  -0.413   8.363   4.856   6.316   2.528   0.616  CBC  L1W  24  
L1W  CBD  C25  C  0  1  Y  N  N   0.725   8.326   5.567   5.871   1.228   0.366  CBD  L1W  25  
L1W  CBE  C26  C  0  1  Y  N  N  -0.628   9.296   3.934   7.564   2.736   1.183  CBE  L1W  26  
L1W  CBF  C27  C  0  1  Y  N  N   0.325  10.268   3.681   8.368   1.658   1.494  CBF  L1W  27  
L1W  CBG  C28  C  0  1  Y  N  N   1.499  10.249   4.420   7.931   0.363   1.241  CBG  L1W  28  
L1W  CBH  C29  C  0  1  Y  N  N   1.681   9.241   5.365   6.681   0.148   0.680  CBH  L1W  29  
L1W  CBJ  C30  C  0  1  N  N  N   2.185  12.466   4.407   8.747  -1.824   0.776  CBJ  L1W  30  
L1W  CBK  C31  C  0  1  N  N  N   3.317  13.407   3.990   9.703  -2.955   1.059  CBK  L1W  31  
L1W  CBL  C32  C  0  1  N  N  N   3.366  13.437   2.447   9.493  -4.069   0.032  CBL  L1W  32  
L1W  CBP  C33  C  0  1  N  N  N   0.224  -0.873  15.521  -6.829   2.223   1.110  CBP  L1W  33  
L1W  CBQ  C34  C  0  1  Y  N  N  -0.843  -0.347  14.795  -5.772   3.155   0.576  CBQ  L1W  34  
L1W  CBR  C35  C  0  1  Y  N  N  -0.904  -0.412  13.407  -4.759   3.598   1.406  CBR  L1W  35  
L1W  CBS  C36  C  0  1  Y  N  N  -2.007   0.105  12.733  -3.786   4.448   0.918  CBS  L1W  36  
L1W  CBT  C37  C  0  1  Y  N  N  -3.062   0.670  13.439  -3.826   4.858  -0.407  CBT  L1W  37  
L1W  CBU  C38  C  0  1  Y  N  N  -3.012   0.719  14.826  -4.843   4.412  -1.238  CBU  L1W  38  
L1W  CBV  C39  C  0  1  Y  N  N  -1.908   0.204  15.496  -5.814   3.562  -0.745  CBV  L1W  39  
L1W  NAC  N1   N  0  1  N  N  N   3.697  -0.100  16.244  -6.812  -1.539   1.172  NAC  L1W  40  
L1W  NAF  N2   N  0  1  N  N  N   1.808   0.571  14.362  -5.223   0.546   0.363  NAF  L1W  41  
L1W  NAT  N3   N  0  1  N  N  N   3.087   4.941   9.083   1.282  -0.713  -1.787  NAT  L1W  42  
L1W  NAZ  N4   N  0  1  N  N  N   0.652   7.287   6.408   4.604   1.338  -0.201  NAZ  L1W  43  
L1W  NBB  N5   N  0  1  N  N  N  -1.187   7.357   5.241   5.299   3.388   0.200  NBB  L1W  44  
L1W  NBI  N6   N  0  1  N  N  N   2.433  11.168   4.166   8.752  -0.726   1.559  NBI  L1W  45  
L1W  OBM  O1   O  0  1  N  N  N   1.157  12.904   4.921   7.975  -1.902  -0.155  OBM  L1W  46  
L1W  OBN  O2   O  0  1  N  N  N  -0.979   5.714   6.750   3.247   3.086  -0.734  OBN  L1W  47  
L1W  OBO  O3   O  0  1  N  N  N   2.142  -1.406  17.235  -8.292  -0.024   1.867  OBO  L1W  48  
L1W  OBW  O4   O  0  1  N  N  N  -4.142   1.174  12.780  -2.870   5.695  -0.889  OBW  L1W  49  
L1W  H2   H2   H  0  1  N  N  N   5.131   2.041  17.209  -5.511  -3.763   2.418  H2   L1W  50  
L1W  H3   H3   H  0  1  N  N  N   7.456   2.866  17.309  -4.735  -6.070   2.071  H3   L1W  51  
L1W  H4   H4   H  0  1  N  N  N   8.982   2.492  15.403  -3.924  -6.782  -0.139  H4   L1W  52  
L1W  H5   H5   H  0  1  N  N  N   8.173   1.311  13.388  -3.884  -5.194  -2.017  H5   L1W  53  
L1W  H6   H6   H  0  1  N  N  N   5.851   0.482  13.289  -4.661  -2.883  -1.696  H6   L1W  54  
L1W  H7   H7   H  0  1  N  N  N   4.114   3.548  14.438  -3.868   0.311  -2.136  H7   L1W  55  
L1W  H8   H8   H  0  1  N  N  N   4.625   5.072  12.582  -1.680  -0.119  -3.176  H8   L1W  56  
L1W  H9   H9   H  0  1  N  N  N   3.075   2.228   9.798  -0.640  -2.716   0.045  H9   L1W  57  
L1W  H10  H10  H  0  1  N  N  N   2.574   0.693  11.662  -2.820  -2.294   1.103  H10  L1W  58  
L1W  H11  H11  H  0  1  N  N  N   5.023   4.242   9.455   0.648  -2.703  -2.008  H11  L1W  59  
L1W  H12  H12  H  0  1  N  N  N   4.489   5.616  10.481   0.214  -1.620  -3.352  H12  L1W  60  
L1W  H13  H13  H  0  1  N  N  N   2.898   6.883   9.859   2.029  -1.842  -0.181  H13  L1W  61  
L1W  H14  H14  H  0  1  N  N  N   1.825   5.650  10.605   0.592  -0.859   0.192  H14  L1W  62  
L1W  H15  H15  H  0  1  N  N  N   0.562   7.223   9.173   1.943   1.205  -0.011  H15  L1W  63  
L1W  H16  H16  H  0  1  N  N  N   0.490   5.543   8.542   2.642   0.113   1.209  H16  L1W  64  
L1W  H17  H17  H  0  1  N  N  N   2.347   7.767   7.584   4.274  -0.719  -0.445  H17  L1W  65  
L1W  H18  H18  H  0  1  N  N  N   2.006   4.906   6.601   2.980   1.312  -2.322  H18  L1W  66  
L1W  H19  H19  H  0  1  N  N  N   3.080   6.157   5.889   4.392   0.293  -2.692  H19  L1W  67  
L1W  H20  H20  H  0  1  N  N  N   4.354   4.710   7.418   2.303  -0.683  -3.622  H20  L1W  68  
L1W  H21  H21  H  0  1  N  N  N   4.248   6.378   8.074   3.015  -1.740  -2.380  H21  L1W  69  
L1W  H22  H22  H  0  1  N  N  N  -1.554   9.296   3.378   7.907   3.741   1.380  H22  L1W  70  
L1W  H23  H23  H  0  1  N  N  N   0.158  11.023   2.927   9.341   1.822   1.935  H23  L1W  71  
L1W  H24  H24  H  0  1  N  N  N   2.596   9.198   5.936   6.341  -0.859   0.484  H24  L1W  72  
L1W  H25  H25  H  0  1  N  N  N   4.274  13.039   4.387  10.727  -2.589   0.995  H25  L1W  73  
L1W  H26  H26  H  0  1  N  N  N   3.124  14.418   4.377   9.518  -3.344   2.060  H26  L1W  74  
L1W  H27  H27  H  0  1  N  N  N   4.173  14.108   2.118   8.468  -4.434   0.096  H27  L1W  75  
L1W  H28  H28  H  0  1  N  N  N   3.555  12.422   2.066   9.677  -3.679  -0.969  H28  L1W  76  
L1W  H29  H29  H  0  1  N  N  N   2.404  13.802   2.057  10.184  -4.887   0.236  H29  L1W  77  
L1W  H30  H30  H  0  1  N  N  N  -0.041  -0.806  16.587  -7.763   2.387   0.572  H30  L1W  78  
L1W  H31  H31  H  0  1  N  N  N   0.326  -1.930  15.234  -6.982   2.417   2.171  H31  L1W  79  
L1W  H32  H32  H  0  1  N  N  N  -0.095  -0.864  12.852  -4.728   3.279   2.438  H32  L1W  80  
L1W  H33  H33  H  0  1  N  N  N  -2.043   0.067  11.654  -2.995   4.794   1.568  H33  L1W  81  
L1W  H34  H34  H  0  1  N  N  N  -3.828   1.156  15.382  -4.876   4.730  -2.270  H34  L1W  82  
L1W  H35  H35  H  0  1  N  N  N  -1.878   0.233  16.575  -6.603   3.211  -1.393  H35  L1W  83  
L1W  H37  H37  H  0  1  N  N  N  -2.096   7.135   4.889   5.320   4.356   0.249  H37  L1W  84  
L1W  H38  H38  H  0  1  N  N  N   3.319  10.890   3.796   9.323  -0.691   2.342  H38  L1W  85  
L1W  H39  H39  H  0  1  N  N  N  -4.765   1.519  13.409  -2.100   5.241  -1.259  H39  L1W  86  
L1W  H1   H1   H  0  1  N  N  N   4.385  -0.343  16.928  -7.374  -2.275   1.460  H1   L1W  87  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L1W  CBL  CBK  SING  N  N   1  
L1W  CBF  CBE  DOUB  Y  N   2  
L1W  CBF  CBG  SING  Y  N   3  
L1W  CBE  CBC  SING  Y  N   4  
L1W  CBK  CBJ  SING  N  N   5  
L1W  NBI  CBJ  SING  N  N   6  
L1W  NBI  CBG  SING  N  N   7  
L1W  CBJ  OBM  DOUB  N  N   8  
L1W  CBG  CBH  DOUB  Y  N   9  
L1W  CBC  NBB  SING  N  N  10  
L1W  CBC  CBD  DOUB  Y  N  11  
L1W  NBB  CBA  SING  N  N  12  
L1W  CBH  CBD  SING  Y  N  13  
L1W  CBD  NAZ  SING  N  N  14  
L1W  CBA  NAZ  SING  N  N  15  
L1W  CBA  OBN  DOUB  N  N  16  
L1W  NAZ  CAW  SING  N  N  17  
L1W  CAX  CAW  SING  N  N  18  
L1W  CAX  CAY  SING  N  N  19  
L1W  CAW  CAV  SING  N  N  20  
L1W  CAY  NAT  SING  N  N  21  
L1W  CAV  CAU  SING  N  N  22  
L1W  NAT  CAU  SING  N  N  23  
L1W  NAT  CAS  SING  N  N  24  
L1W  CAS  CAP  SING  N  N  25  
L1W  CAQ  CAP  DOUB  Y  N  26  
L1W  CAQ  CAR  SING  Y  N  27  
L1W  CAP  CAO  SING  Y  N  28  
L1W  CAR  CAH  DOUB  Y  N  29  
L1W  CAO  CAN  DOUB  Y  N  30  
L1W  CBS  CBR  DOUB  Y  N  31  
L1W  CBS  CBT  SING  Y  N  32  
L1W  OBW  CBT  SING  N  N  33  
L1W  CAH  CAN  SING  Y  N  34  
L1W  CAH  CAE  SING  N  N  35  
L1W  CBR  CBQ  SING  Y  N  36  
L1W  CBT  CBU  DOUB  Y  N  37  
L1W  CAM  CAL  DOUB  Y  N  38  
L1W  CAM  CAG  SING  Y  N  39  
L1W  CAL  CAK  SING  Y  N  40  
L1W  CAE  NAF  SING  N  N  41  
L1W  CAE  CAD  DOUB  N  N  42  
L1W  NAF  CAA  DOUB  N  N  43  
L1W  CBQ  CBV  DOUB  Y  N  44  
L1W  CBQ  CBP  SING  N  N  45  
L1W  CBU  CBV  SING  Y  N  46  
L1W  CAD  CAG  SING  N  N  47  
L1W  CAD  NAC  SING  N  N  48  
L1W  CAG  CAI  DOUB  Y  N  49  
L1W  CAK  CAJ  DOUB  Y  N  50  
L1W  CAA  CBP  SING  N  N  51  
L1W  CAA  CAB  SING  N  N  52  
L1W  NAC  CAB  SING  N  N  53  
L1W  CAB  OBO  DOUB  N  N  54  
L1W  CAI  CAJ  SING  Y  N  55  
L1W  CAI  H2   SING  N  N  56  
L1W  CAJ  H3   SING  N  N  57  
L1W  CAK  H4   SING  N  N  58  
L1W  CAL  H5   SING  N  N  59  
L1W  CAM  H6   SING  N  N  60  
L1W  CAN  H7   SING  N  N  61  
L1W  CAO  H8   SING  N  N  62  
L1W  CAQ  H9   SING  N  N  63  
L1W  CAR  H10  SING  N  N  64  
L1W  CAS  H11  SING  N  N  65  
L1W  CAS  H12  SING  N  N  66  
L1W  CAU  H13  SING  N  N  67  
L1W  CAU  H14  SING  N  N  68  
L1W  CAV  H15  SING  N  N  69  
L1W  CAV  H16  SING  N  N  70  
L1W  CAW  H17  SING  N  N  71  
L1W  CAX  H18  SING  N  N  72  
L1W  CAX  H19  SING  N  N  73  
L1W  CAY  H20  SING  N  N  74  
L1W  CAY  H21  SING  N  N  75  
L1W  CBE  H22  SING  N  N  76  
L1W  CBF  H23  SING  N  N  77  
L1W  CBH  H24  SING  N  N  78  
L1W  CBK  H25  SING  N  N  79  
L1W  CBK  H26  SING  N  N  80  
L1W  CBL  H27  SING  N  N  81  
L1W  CBL  H28  SING  N  N  82  
L1W  CBL  H29  SING  N  N  83  
L1W  CBP  H30  SING  N  N  84  
L1W  CBP  H31  SING  N  N  85  
L1W  CBR  H32  SING  N  N  86  
L1W  CBS  H33  SING  N  N  87  
L1W  CBU  H34  SING  N  N  88  
L1W  CBV  H35  SING  N  N  89  
L1W  NBB  H37  SING  N  N  90  
L1W  NBI  H38  SING  N  N  91  
L1W  OBW  H39  SING  N  N  92  
L1W  NAC  H1   SING  N  N  93  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L1W  InChI             InChI                 1.03   "InChI=1S/C39H38N6O4/c1-2-35(47)40-29-14-17-32-34(23-29)45(39(49)42-32)30-18-20-44(21-19-30)24-26-8-12-28(13-9-26)36-37(27-6-4-3-5-7-27)43-38(48)33(41-36)22-25-10-15-31(46)16-11-25/h3-17,23,30,46H,2,18-22,24H2,1H3,(H,40,47)(H,42,49)(H,43,48)"  
L1W  InChIKey          InChI                 1.03   LMPCSGMPKCSYTR-UHFFFAOYSA-N  
L1W  SMILES_CANONICAL  CACTVS                3.385  "CCC(=O)Nc1ccc2NC(=O)N(C3CCN(CC3)Cc4ccc(cc4)C5=C(NC(=O)C(=N5)Cc6ccc(O)cc6)c7ccccc7)c2c1"  
L1W  SMILES            CACTVS                3.385  "CCC(=O)Nc1ccc2NC(=O)N(C3CCN(CC3)Cc4ccc(cc4)C5=C(NC(=O)C(=N5)Cc6ccc(O)cc6)c7ccccc7)c2c1"  
L1W  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCC(=O)Nc1ccc2c(c1)N(C(=O)N2)C3CCN(CC3)Cc4ccc(cc4)C5=C(NC(=O)C(=N5)Cc6ccc(cc6)O)c7ccccc7"  
L1W  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC(=O)Nc1ccc2c(c1)N(C(=O)N2)C3CCN(CC3)Cc4ccc(cc4)C5=C(NC(=O)C(=N5)Cc6ccc(cc6)O)c7ccccc7"  
#
_pdbx_chem_comp_identifier.comp_id          L1W
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[3-[1-[[4-[5-[(4-hydroxyphenyl)methyl]-6-oxidanylidene-2-phenyl-1~{H}-pyrazin-3-yl]phenyl]methyl]piperidin-4-yl]-2-oxidanylidene-1~{H}-benzimidazol-5-yl]propanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L1W  "Create component"    2019-07-15  PDBE  
L1W  "Other modification"  2019-07-16  EBI   
L1W  "Initial release"     2019-10-16  RCSB  
##
