data_E9W
#

_chem_comp.id                                   E9W
_chem_comp.name                                 "azanylidene-[[(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[2-oxidanylidene-2-(prop-2-ynylamino)ethyl]sulfanyl-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylimino]azanium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H18 N9 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2018-03-12
_chem_comp.pdbx_modified_date                   2019-03-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       420.426
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    E9W
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6FXV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E9W  C2   C1   C  0  1  Y  N  N  -18.644  13.115  41.894   3.910   3.633  -0.648  C2   E9W   1  
E9W  C4   C2   C  0  1  Y  N  N  -16.481  13.745  41.695   2.302   2.023  -0.322  C4   E9W   2  
E9W  C5   C3   C  0  1  Y  N  N  -16.115  12.535  41.089   1.309   3.011  -0.422  C5   E9W   3  
E9W  C6   C4   C  0  1  Y  N  N  -17.072  11.550  40.913   1.712   4.336  -0.654  C6   E9W   4  
E9W  N9   N1   N  0  1  Y  N  N  -15.381  14.486  41.782   1.642   0.836  -0.107  N9   E9W   5  
E9W  C8   C5   C  0  1  Y  N  N  -14.376  13.749  41.266   0.301   1.112  -0.082  C8   E9W   6  
E9W  CAA  C6   C  0  1  N  N  N  -15.092  11.596  35.993  -8.223   1.530   0.286  CAA  E9W   7  
E9W  CAB  C7   C  0  1  N  N  N  -14.052  11.681  36.508  -7.280   0.834   0.343  CAB  E9W   8  
E9W  CAC  C8   C  0  1  N  N  N  -12.677  11.742  37.115  -6.098  -0.040   0.416  CAC  E9W   9  
E9W  CAE  C9   C  0  1  N  N  N  -11.734  12.483  39.211  -3.675   0.170   0.262  CAE  E9W  10  
E9W  CAG  C10  C  0  1  N  N  N  -11.829  12.654  40.727  -2.428   0.995   0.074  CAG  E9W  11  
E9W  CAK  C11  C  0  1  N  N  R  -15.305  15.901  42.357   2.259  -0.482   0.062  CAK  E9W  12  
E9W  CAM  C12  C  0  1  N  N  R  -14.300  18.108  42.204   1.824  -2.756  -0.000  CAM  E9W  13  
E9W  CAN  C13  C  0  1  N  N  N  -12.892  17.755  42.520   0.598  -3.671   0.027  CAN  E9W  14  
E9W  CAR  C14  C  0  1  N  N  S  -14.792  17.762  43.630   2.289  -2.459   1.439  CAR  E9W  15  
E9W  CAT  C15  C  0  1  N  N  R  -14.578  16.236  43.657   2.220  -0.916   1.549  CAT  E9W  16  
E9W  N1   N2   N  0  1  Y  N  N  -18.370  11.870  41.306   3.011   4.595  -0.754  N1   E9W  17  
E9W  N3   N3   N  0  1  Y  N  N  -17.723  14.019  42.070   3.577   2.376  -0.440  N3   E9W  18  
E9W  N6   N4   N  0  1  N  N  N  -16.756  10.372  40.338   0.776   5.352  -0.763  N6   E9W  19  
E9W  N7   N5   N  0  1  Y  N  N  -14.801  12.562  40.856   0.110   2.395  -0.267  N7   E9W  20  
E9W  NAD  N6   N  0  1  N  N  N  -12.762  11.915  38.588  -4.886   0.762   0.233  NAD  E9W  21  
E9W  NAO  N7   N  0  1  N  N  N  -12.149  17.590  41.262   0.236  -4.043  -1.343  NAO  E9W  22  
E9W  NAP  N8   N  1  1  N  N  N  -10.889  17.200  41.316   0.230  -5.125  -1.648  NAP  E9W  23  
E9W  NAQ  N9   N  0  1  N  N  N   -9.614  16.812  41.378   0.224  -6.207  -1.953  NAQ  E9W  24  
E9W  OAF  O1   O  0  1  N  N  N  -10.750  12.940  38.614  -3.589  -1.027   0.439  OAF  E9W  25  
E9W  OAL  O2   O  0  1  N  N  N  -14.831  16.926  41.407   1.481  -1.498  -0.607  OAL  E9W  26  
E9W  OAS  O3   O  0  1  N  N  N  -16.142  18.073  43.937   3.628  -2.915   1.635  OAS  E9W  27  
E9W  OAU  O4   O  0  1  N  N  N  -15.398  15.708  44.719   3.349  -0.405   2.260  OAU  E9W  28  
E9W  SAH  S1   S  0  1  N  N  N  -12.674  14.244  41.157  -0.974  -0.079   0.163  SAH  E9W  29  
E9W  H1   H1   H  0  1  N  N  N  -19.654  13.331  42.211   4.956   3.886  -0.740  H1   E9W  30  
E9W  H2   H2   H  0  1  N  N  N  -16.039  11.519  35.524  -9.066   2.154   0.234  H2   E9W  31  
E9W  H3   H3   H  0  1  N  N  N  -12.141  10.808  36.891  -6.067  -0.529   1.390  H3   E9W  32  
E9W  H4   H4   H  0  1  N  N  N  -12.128  12.592  36.682  -6.155  -0.795  -0.368  H4   E9W  33  
E9W  H5   H5   H  0  1  N  N  N  -12.402  11.815  41.149  -2.460   1.484  -0.900  H5   E9W  34  
E9W  H6   H6   H  0  1  N  N  N  -10.815  12.657  41.154  -2.371   1.750   0.858  H6   E9W  35  
E9W  H7   H7   H  0  1  N  N  N  -16.353  16.168  42.557   3.284  -0.475  -0.309  H7   E9W  36  
E9W  H8   H8   H  0  1  N  N  N  -14.516  19.119  41.828   2.629  -3.232  -0.559  H8   E9W  37  
E9W  H9   H9   H  0  1  N  N  N  -12.866  16.815  43.090   0.828  -4.569   0.599  H9   E9W  38  
E9W  H10  H10  H  0  1  N  N  N  -12.435  18.558  43.116  -0.236  -3.147   0.494  H10  E9W  39  
E9W  H11  H11  H  0  1  N  N  N  -14.114  18.228  44.360   1.616  -2.924   2.160  H11  E9W  40  
E9W  H12  H12  H  0  1  N  N  N  -13.521  15.933  43.674   1.289  -0.601   2.022  H12  E9W  41  
E9W  H13  H13  H  0  1  N  N  N  -17.579   9.810  40.254  -0.169   5.153  -0.678  H13  E9W  42  
E9W  H14  H14  H  0  1  N  N  N  -16.371  10.537  39.430   1.067   6.264  -0.924  H14  E9W  43  
E9W  H15  H15  H  0  1  N  N  N  -13.569  11.613  39.096  -4.954   1.719   0.092  H15  E9W  44  
E9W  H17  H17  H  0  1  N  N  N  -16.330  17.818  44.833   3.740  -3.869   1.520  H17  E9W  45  
E9W  H18  H18  H  0  1  N  N  N  -14.988  15.890  45.557   3.369  -0.650   3.195  H18  E9W  46  
E9W  H16  H16  H  0  1  N  N  N   -9.112  17.289  42.099   1.028  -6.613  -2.315  H16  E9W  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E9W  CAA  CAB  TRIP  N  N   1  
E9W  CAB  CAC  SING  N  N   2  
E9W  CAC  NAD  SING  N  N   3  
E9W  NAD  CAE  SING  N  N   4  
E9W  OAF  CAE  DOUB  N  N   5  
E9W  CAE  CAG  SING  N  N   6  
E9W  N6   C6   SING  N  N   7  
E9W  CAG  SAH  SING  N  N   8  
E9W  N7   C5   SING  Y  N   9  
E9W  N7   C8   DOUB  Y  N  10  
E9W  C6   C5   DOUB  Y  N  11  
E9W  C6   N1   SING  Y  N  12  
E9W  C5   C4   SING  Y  N  13  
E9W  SAH  C8   SING  N  N  14  
E9W  NAO  NAP  DOUB  N  N  15  
E9W  NAO  CAN  SING  N  N  16  
E9W  C8   N9   SING  Y  N  17  
E9W  N1   C2   DOUB  Y  N  18  
E9W  NAP  NAQ  DOUB  N  N  19  
E9W  OAL  CAM  SING  N  N  20  
E9W  OAL  CAK  SING  N  N  21  
E9W  C4   N9   SING  Y  N  22  
E9W  C4   N3   DOUB  Y  N  23  
E9W  N9   CAK  SING  N  N  24  
E9W  C2   N3   SING  Y  N  25  
E9W  CAM  CAN  SING  N  N  26  
E9W  CAM  CAR  SING  N  N  27  
E9W  CAK  CAT  SING  N  N  28  
E9W  CAR  CAT  SING  N  N  29  
E9W  CAR  OAS  SING  N  N  30  
E9W  CAT  OAU  SING  N  N  31  
E9W  C2   H1   SING  N  N  32  
E9W  CAA  H2   SING  N  N  33  
E9W  CAC  H3   SING  N  N  34  
E9W  CAC  H4   SING  N  N  35  
E9W  CAG  H5   SING  N  N  36  
E9W  CAG  H6   SING  N  N  37  
E9W  CAK  H7   SING  N  N  38  
E9W  CAM  H8   SING  N  N  39  
E9W  CAN  H9   SING  N  N  40  
E9W  CAN  H10  SING  N  N  41  
E9W  CAR  H11  SING  N  N  42  
E9W  CAT  H12  SING  N  N  43  
E9W  N6   H13  SING  N  N  44  
E9W  N6   H14  SING  N  N  45  
E9W  NAD  H15  SING  N  N  46  
E9W  OAS  H17  SING  N  N  47  
E9W  OAU  H18  SING  N  N  48  
E9W  NAQ  H16  SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E9W  InChI             InChI                 1.03   "InChI=1S/C15H17N9O4S/c1-2-3-18-8(25)5-29-15-22-9-12(16)19-6-20-13(9)24(15)14-11(27)10(26)7(28-14)4-21-23-17/h1,6-7,10-11,14,17,26-27H,3-5H2,(H2-,16,18,19,20,25)/p+1/t7-,10-,11-,14-/m1/s1"  
E9W  InChIKey          InChI                 1.03   JLTMRFGYLXJIRU-FRJWGUMJSA-O  
E9W  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2n([C@@H]3O[C@H](CN=[N+]=N)[C@@H](O)[C@H]3O)c(SCC(=O)NCC#C)nc12"  
E9W  SMILES            CACTVS                3.385  "Nc1ncnc2n([CH]3O[CH](CN=[N+]=N)[CH](O)[CH]3O)c(SCC(=O)NCC#C)nc12"  
E9W  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C#CCNC(=O)CSc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CN=[N+]=N)O)O)N"  
E9W  SMILES            "OpenEye OEToolkits"  2.0.6  "C#CCNC(=O)CSc1nc2c(ncnc2n1C3C(C(C(O3)CN=[N+]=N)O)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          E9W
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "azanylidene-[[(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[2-oxidanylidene-2-(prop-2-ynylamino)ethyl]sulfanyl-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylimino]azanium"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E9W  "Create component"  2018-03-12  EBI   
E9W  "Initial release"   2019-03-20  RCSB  
##
