data_DYW
# 
_chem_comp.id                                    DYW 
_chem_comp.name                                  "(2~{S})-1-[(2~{S})-2-azanyl-4-oxidanyl-4-oxidanylidene-butanoyl]pyrrolidine-2-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H14 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-02-05 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.218 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DYW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6FMQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DYW C49 C1  C 0 1 N N N N N N 19.645 -25.365 -29.471 -2.001 0.251  -0.632 C49 DYW 1  
DYW C50 C2  C 0 1 N N N N N N 19.221 -26.763 -29.780 -3.439 -0.197 -0.648 C50 DYW 2  
DYW C02 C3  C 0 1 N N N N N N 21.456 -26.534 -28.151 0.005  0.526  0.799  C02 DYW 3  
DYW C04 C4  C 0 1 N N S N N N 23.328 -28.305 -28.459 2.366  -0.235 0.414  C04 DYW 4  
DYW C05 C5  C 0 1 N N N N N N 24.601 -28.379 -29.374 2.986  -1.587 0.005  C05 DYW 5  
DYW C06 C6  C 0 1 N N N N N N 24.360 -27.518 -30.386 1.883  -2.607 0.391  C06 DYW 6  
DYW C07 C7  C 0 1 N N N N N N 23.385 -26.365 -29.808 0.595  -1.807 0.072  C07 DYW 7  
DYW C08 C8  C 0 1 N N N N N N 23.752 -28.306 -27.079 2.718  0.820  -0.602 C08 DYW 8  
DYW C48 C9  C 0 1 N N S N N N 20.601 -25.253 -28.332 -1.465 0.196  0.799  C48 DYW 9  
DYW N03 N1  N 0 1 N N N N N N 22.659 -26.978 -28.843 0.907  -0.417 0.461  N03 DYW 10 
DYW N53 N2  N 0 1 N N N N N N 21.252 -23.933 -28.384 -2.185 1.171  1.630  N53 DYW 11 
DYW O01 O1  O 0 1 N N N N N N 21.069 -27.302 -27.341 0.377  1.640  1.102  O01 DYW 12 
DYW O47 O2  O 0 1 N N N N N N 23.786 -29.294 -26.403 1.845  1.374  -1.226 O47 DYW 13 
DYW O51 O3  O 0 1 N N N N N N 20.108 -27.571 -30.166 -3.981 -0.527 0.380  O51 DYW 14 
DYW O52 O4  O 0 1 N N N N N N 17.995 -27.071 -29.709 -4.120 -0.230 -1.805 O52 DYW 15 
DYW H1  H1  H 0 1 N N N N N N 20.125 -24.944 -30.367 -1.408 -0.407 -1.268 H1  DYW 16 
DYW H2  H2  H 0 1 N N N N N N 18.747 -24.778 -29.227 -1.935 1.273  -1.006 H2  DYW 17 
DYW H3  H3  H 0 1 N N N N N N 22.658 -29.149 -28.680 2.734  0.060  1.397  H3  DYW 18 
DYW H4  H4  H 0 1 N N N N N N 24.739 -29.400 -29.760 3.179  -1.614 -1.068 H4  DYW 19 
DYW H5  H5  H 0 1 N N N N N N 25.497 -28.074 -28.814 3.903  -1.776 0.564  H5  DYW 20 
DYW H6  H6  H 0 1 N N N N N N 23.871 -28.043 -31.219 1.948  -3.504 -0.226 H6  DYW 21 
DYW H7  H7  H 0 1 N N N N N N 25.303 -27.074 -30.736 1.934  -2.859 1.450  H7  DYW 22 
DYW H8  H8  H 0 1 N N N N N N 23.972 -25.537 -29.384 0.367  -1.863 -0.992 H8  DYW 23 
DYW H9  H9  H 0 1 N N N N N N 22.728 -25.980 -30.601 -0.242 -2.185 0.660  H9  DYW 24 
DYW H11 H11 H 0 1 N N N N N N 19.966 -25.222 -27.434 -1.612 -0.805 1.204  H11 DYW 25 
DYW H12 H12 H 0 1 N N N N N N 21.896 -23.848 -27.623 -1.895 1.109  2.594  H12 DYW 26 
DYW H13 H13 H 0 1 N N N N N N 21.744 -23.838 -29.249 -2.064 2.108  1.275  H13 DYW 27 
DYW H15 H15 H 0 1 N N N N N N 17.878 -27.972 -29.985 -5.040 -0.525 -1.765 H15 DYW 28 
DYW O1  O5  O 0 1 N Y N N N N 24.166 -27.062 -26.425 4.004  1.144  -0.815 O1  DYW 29 
DYW H10 H10 H 0 1 N N N N N N 24.408 -27.243 -25.524 4.181  1.826  -1.477 H10 DYW 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DYW C06 C07 SING N N 1  
DYW C06 C05 SING N N 2  
DYW O51 C50 DOUB N N 3  
DYW C07 N03 SING N N 4  
DYW C50 O52 SING N N 5  
DYW C50 C49 SING N N 6  
DYW C49 C48 SING N N 7  
DYW C05 C04 SING N N 8  
DYW N03 C04 SING N N 9  
DYW N03 C02 SING N N 10 
DYW C04 C08 SING N N 11 
DYW N53 C48 SING N N 12 
DYW C48 C02 SING N N 13 
DYW C02 O01 DOUB N N 14 
DYW C08 O47 DOUB N N 15 
DYW C49 H1  SING N N 16 
DYW C49 H2  SING N N 17 
DYW C04 H3  SING N N 18 
DYW C05 H4  SING N N 19 
DYW C05 H5  SING N N 20 
DYW C06 H6  SING N N 21 
DYW C06 H7  SING N N 22 
DYW C07 H8  SING N N 23 
DYW C07 H9  SING N N 24 
DYW C48 H11 SING N N 25 
DYW N53 H12 SING N N 26 
DYW N53 H13 SING N N 27 
DYW O52 H15 SING N N 28 
DYW C08 O1  SING N N 29 
DYW O1  H10 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DYW InChI            InChI                1.03  "InChI=1S/C9H14N2O5/c10-5(4-7(12)13)8(14)11-3-1-2-6(11)9(15)16/h5-6H,1-4,10H2,(H,12,13)(H,15,16)/t5-,6-/m0/s1" 
DYW InChIKey         InChI                1.03  UKGGPJNBONZZCM-WDSKDSINSA-N                                                                                    
DYW SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CC(O)=O)C(=O)N1CCC[C@H]1C(O)=O"                                                                       
DYW SMILES           CACTVS               3.385 "N[CH](CC(O)=O)C(=O)N1CCC[CH]1C(O)=O"                                                                          
DYW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1C[C@H](N(C1)C(=O)[C@H](CC(=O)O)N)C(=O)O"                                                                    
DYW SMILES           "OpenEye OEToolkits" 2.0.6 "C1CC(N(C1)C(=O)C(CC(=O)O)N)C(=O)O"                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           DYW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-1-[(2~{S})-2-azanyl-4-oxidanyl-4-oxidanylidene-butanoyl]pyrrolidine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DYW "Create component" 2018-02-05 EBI  
DYW "Initial release"  2018-08-08 RCSB 
DYW "Modify PCM"       2024-09-27 PDBE 
# 
