data_99W
# 
_chem_comp.id                                    99W 
_chem_comp.name                                  "(S)-N-((S)-1-imino-3-((S)-2-oxopyrrolidin-3-yl)propan-2-yl)-4-methyl-2-(2-((2,4,6-trifluorophenyl)amino)acetamido)pentanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H28 F3 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "N-(2,4,6-trifluorophenyl)glycyl-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-06 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        455.474 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     99W 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7SGH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
99W N1  N1  N 0 1 N N N N N N -6.452  -27.942 56.569 -0.083 0.023  0.713  N1  99W 1  
99W N3  N2  N 0 1 N N N N N N -5.891  -25.021 54.782 3.600  -0.166 0.834  N3  99W 2  
99W C4  C1  C 0 1 N N N N N N -8.594  -28.961 54.621 0.491  2.853  0.116  C4  99W 3  
99W C5  C2  C 0 1 N N N N N N -10.079 -29.161 54.363 0.588  4.264  0.700  C5  99W 4  
99W C6  C3  C 0 1 N N N N N N -7.786  -29.501 53.459 0.870  2.887  -1.366 C6  99W 5  
99W C7  C4  C 0 1 N N N N N N -5.183  -27.968 56.993 -1.123 0.303  -0.097 C7  99W 6  
99W C8  C5  C 0 1 N N N N N N -4.888  -28.604 58.355 -2.508 -0.172 0.263  C8  99W 7  
99W C10 C6  C 0 1 Y N N N N N -5.389  -31.768 59.970 -5.774 0.765  -0.300 C10 99W 8  
99W C13 C7  C 0 1 Y N N N N N -4.275  -32.907 57.697 -6.315 -1.940 -0.024 C13 99W 9  
99W C15 C8  C 0 1 N N S N N N -5.519  -23.633 55.017 4.597  -1.036 1.464  C15 99W 10 
99W C17 C9  C 0 1 N N N N N N -4.008  -23.435 55.153 5.900  -0.982 0.664  C17 99W 11 
99W C20 C10 C 0 1 N N N N N N -2.529  -23.484 58.588 6.853  -0.225 -2.319 C20 99W 12 
99W C21 C11 C 0 1 N N N N N N -1.864  -23.820 56.365 4.722  -0.698 -1.526 C21 99W 13 
99W O1  O1  O 0 1 N N N N N N -6.985  -25.256 56.735 1.929  -1.341 1.699  O1  99W 14 
99W C1  C12 C 0 1 N N N N N N -6.611  -25.721 55.660 2.286  -0.405 1.015  C1  99W 15 
99W C2  C13 C 0 1 N N S N N N -6.834  -27.206 55.368 1.261  0.489  0.366  C2  99W 16 
99W C3  C14 C 0 1 N N N N N N -8.268  -27.492 54.907 1.448  1.923  0.865  C3  99W 17 
99W N2  N3  N 0 1 N N N N N N -5.768  -29.685 58.739 -3.457 0.258  -0.772 N2  99W 18 
99W C9  C15 C 0 1 Y N N N N N -5.333  -31.006 58.801 -4.758 -0.168 -0.468 C9  99W 19 
99W F1  F1  F 0 1 N N N N N N -5.930  -31.207 61.071 -5.511 2.083  -0.434 F1  99W 20 
99W C11 C16 C 0 1 Y N N N N N -4.912  -33.066 60.024 -7.057 0.342  0.000  C11 99W 21 
99W C12 C17 C 0 1 Y N N N N N -4.363  -33.590 58.877 -7.327 -1.009 0.138  C12 99W 22 
99W F2  F2  F 0 1 N N N N N N -3.881  -34.854 58.902 -8.578 -1.418 0.442  F2  99W 23 
99W C14 C18 C 0 1 Y N N N N N -4.761  -31.618 57.683 -5.034 -1.523 -0.335 C14 99W 24 
99W F3  F3  F 0 1 N N N N N N -4.688  -30.911 56.541 -4.047 -2.433 -0.493 F3  99W 25 
99W O2  O2  O 0 1 N N N N N N -4.263  -27.451 56.356 -0.946 0.936  -1.115 O2  99W 26 
99W C16 C19 C 0 1 N N N N N N -6.034  -22.751 53.898 4.853  -0.568 2.873  C16 99W 27 
99W N4  N4  N 0 1 N N N N N N -6.375  -21.515 54.153 4.229  0.450  3.332  N4  99W 28 
99W C18 C20 C 0 1 N N S N N N -3.366  -24.042 56.385 5.668  -1.574 -0.728 C18 99W 29 
99W C19 C21 C 0 1 N N N N N N -3.805  -23.523 57.753 6.979  -1.558 -1.548 C19 99W 30 
99W N5  N5  N 0 1 N N N N N N -1.459  -23.484 57.587 5.412  0.040  -2.412 N5  99W 31 
99W O3  O3  O 0 1 N N N N N N -1.151  -23.944 55.377 3.517  -0.670 -1.386 O3  99W 32 
99W H1  H1  H 0 1 N N N N N N -7.152  -28.436 57.085 -0.226 -0.484 1.528  H1  99W 33 
99W H2  H2  H 0 1 N N N N N N -5.597  -25.464 53.935 3.886  0.582  0.287  H2  99W 34 
99W H3  H3  H 0 1 N N N N N N -8.327  -29.542 55.516 -0.530 2.485  0.222  H3  99W 35 
99W H4  H4  H 0 1 N N N N N N -10.656 -28.766 55.212 1.609  4.631  0.595  H4  99W 36 
99W H5  H5  H 0 1 N N N N N N -10.367 -28.628 53.445 -0.093 4.926  0.166  H5  99W 37 
99W H6  H6  H 0 1 N N N N N N -10.289 -30.234 54.245 0.318  4.239  1.756  H6  99W 38 
99W H7  H7  H 0 1 N N N N N N -6.714  -29.351 53.656 0.801  1.882  -1.782 H7  99W 39 
99W H8  H8  H 0 1 N N N N N N -7.990  -30.575 53.339 0.189  3.549  -1.900 H8  99W 40 
99W H9  H9  H 0 1 N N N N N N -8.067  -28.969 52.538 1.891  3.255  -1.472 H9  99W 41 
99W H10 H10 H 0 1 N N N N N N -3.860  -28.995 58.331 -2.513 -1.260 0.332  H10 99W 42 
99W H11 H11 H 0 1 N N N N N N -4.963  -27.817 59.120 -2.800 0.254  1.223  H11 99W 43 
99W H12 H12 H 0 1 N N N N N N -3.844  -33.357 56.815 -6.527 -2.993 0.093  H12 99W 44 
99W H13 H13 H 0 1 N N N N N N -5.986  -23.297 55.954 4.224  -2.060 1.483  H13 99W 45 
99W H14 H14 H 0 1 N N N N N N -3.529  -23.882 54.269 6.225  0.054  0.569  H14 99W 46 
99W H15 H15 H 0 1 N N N N N N -3.811  -22.353 55.169 6.667  -1.558 1.180  H15 99W 47 
99W H16 H16 H 0 1 N N N N N N -2.458  -24.369 59.238 7.349  0.576  -1.772 H16 99W 48 
99W H17 H17 H 0 1 N N N N N N -2.491  -22.573 59.203 7.283  -0.324 -3.316 H17 99W 49 
99W H18 H18 H 0 1 N N N N N N -6.156  -27.492 54.550 1.388  0.462  -0.716 H18 99W 50 
99W H19 H19 H 0 1 N N N N N N -8.447  -26.920 53.984 2.476  2.240  0.687  H19 99W 51 
99W H20 H20 H 0 1 N N N N N N -8.952  -27.141 55.694 1.235  1.967  1.934  H20 99W 52 
99W H21 H21 H 0 1 N N N N N N -6.106  -29.459 59.652 -3.425 1.258  -0.900 H21 99W 53 
99W H22 H22 H 0 1 N N N N N N -4.969  -33.646 60.933 -7.848 1.066  0.127  H22 99W 54 
99W H23 H23 H 0 1 N N N N N N -6.119  -23.141 52.895 5.563  -1.092 3.496  H23 99W 55 
99W H24 H24 H 0 1 N N N N N N -6.698  -21.039 53.335 4.394  0.752  4.239  H24 99W 56 
99W H25 H25 H 0 1 N N N N N N -3.548  -25.127 56.363 5.276  -2.588 -0.650 H25 99W 57 
99W H26 H26 H 0 1 N N N N N N -4.239  -22.516 57.663 7.021  -2.403 -2.234 H26 99W 58 
99W H27 H27 H 0 1 N N N N N N -4.543  -24.202 58.206 7.850  -1.547 -0.891 H27 99W 59 
99W H28 H28 H 0 1 N N N N N N -0.510  -23.252 57.803 5.010  0.668  -3.032 H28 99W 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
99W C6  C4  SING N N 1  
99W C16 N4  DOUB N N 2  
99W C16 C15 SING N N 3  
99W C5  C4  SING N N 4  
99W C4  C3  SING N N 5  
99W N3  C15 SING N N 6  
99W N3  C1  SING N N 7  
99W C3  C2  SING N N 8  
99W C15 C17 SING N N 9  
99W C17 C18 SING N N 10 
99W C2  C1  SING N N 11 
99W C2  N1  SING N N 12 
99W O3  C21 DOUB N N 13 
99W C1  O1  DOUB N N 14 
99W O2  C7  DOUB N N 15 
99W C21 C18 SING N N 16 
99W C21 N5  SING N N 17 
99W C18 C19 SING N N 18 
99W F3  C14 SING N N 19 
99W N1  C7  SING N N 20 
99W C7  C8  SING N N 21 
99W N5  C20 SING N N 22 
99W C14 C13 DOUB Y N 23 
99W C14 C9  SING Y N 24 
99W C13 C12 SING Y N 25 
99W C19 C20 SING N N 26 
99W C8  N2  SING N N 27 
99W N2  C9  SING N N 28 
99W C9  C10 DOUB Y N 29 
99W C12 F2  SING N N 30 
99W C12 C11 DOUB Y N 31 
99W C10 C11 SING Y N 32 
99W C10 F1  SING N N 33 
99W N1  H1  SING N N 34 
99W N3  H2  SING N N 35 
99W C4  H3  SING N N 36 
99W C5  H4  SING N N 37 
99W C5  H5  SING N N 38 
99W C5  H6  SING N N 39 
99W C6  H7  SING N N 40 
99W C6  H8  SING N N 41 
99W C6  H9  SING N N 42 
99W C8  H10 SING N N 43 
99W C8  H11 SING N N 44 
99W C13 H12 SING N N 45 
99W C15 H13 SING N N 46 
99W C17 H14 SING N N 47 
99W C17 H15 SING N N 48 
99W C20 H16 SING N N 49 
99W C20 H17 SING N N 50 
99W C2  H18 SING N N 51 
99W C3  H19 SING N N 52 
99W C3  H20 SING N N 53 
99W N2  H21 SING N N 54 
99W C11 H22 SING N N 55 
99W C16 H23 SING N N 56 
99W N4  H24 SING N N 57 
99W C18 H25 SING N N 58 
99W C19 H26 SING N N 59 
99W C19 H27 SING N N 60 
99W N5  H28 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
99W SMILES           ACDLabs              12.01 "Fc1cc(F)cc(F)c1NCC(=O)NC(CC(C)C)C(=O)NC(CC1CCNC1=O)C=N"                                                                                                                                                           
99W InChI            InChI                1.03  "InChI=1S/C21H28F3N5O3/c1-11(2)5-17(21(32)28-14(9-25)6-12-3-4-26-20(12)31)29-18(30)10-27-19-15(23)7-13(22)8-16(19)24/h7-9,11-12,14,17,25,27H,3-6,10H2,1-2H3,(H,26,31)(H,28,32)(H,29,30)/b25-9-/t12-,14-,17-/m0/s1" 
99W InChIKey         InChI                1.03  ZQILDLPZFYNMME-OGBZPUTOSA-N                                                                                                                                                                                        
99W SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)CNc1c(F)cc(F)cc1F)C(=O)N[C@@H](C[C@@H]2CCNC2=O)C=N"                                                                                                                                             
99W SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)CNc1c(F)cc(F)cc1F)C(=O)N[CH](C[CH]2CCNC2=O)C=N"                                                                                                                                                  
99W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C\[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC(C)C)NC(=O)CNc2c(cc(cc2F)F)F"                                                                                                                                         
99W SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C=N)NC(=O)CNc2c(cc(cc2F)F)F"                                                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
99W "SYSTEMATIC NAME" ACDLabs              12.01 "N-(2,4,6-trifluorophenyl)glycyl-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide"                                                             
99W "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-~{N}-[(2~{S})-1-azanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-4-methyl-2-[2-[[2,4,6-tris(fluoranyl)phenyl]amino]ethanoylamino]pentanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
99W "Create component" 2021-10-06 RCSB 
99W "Initial release"  2022-10-05 RCSB 
99W "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      99W 
_pdbx_chem_comp_synonyms.name         "N-(2,4,6-trifluorophenyl)glycyl-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            99W 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C16 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
