data_5ZW
#

_chem_comp.id                                   5ZW
_chem_comp.name                                 "6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H15 Cl N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-07-30
_chem_comp.pdbx_modified_date                   2021-11-05
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       334.758
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5ZW
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7RNH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5ZW  C1    C1   C   0  1  N  N  N  -11.428  -40.675  17.242  -3.365   0.415  -0.281  C1    5ZW   1  
5ZW  C2    C2   C   0  1  N  N  N  -11.884  -39.514  18.087  -2.336   1.462  -0.496  C2    5ZW   2  
5ZW  C5    C3   C   0  1  N  N  N  -13.843  -40.844  18.960  -0.169   2.474   0.044  C5    5ZW   3  
5ZW  C6    C4   C   0  1  N  N  N  -15.268  -40.466  18.572   1.185   1.865  -0.336  C6    5ZW   4  
5ZW  C8    C5   C   0  1  N  N  N  -14.885  -38.171  19.301   0.559  -0.292   0.580  C8    5ZW   5  
5ZW  C9    C6   C   0  1  N  N  N  -13.453  -38.535  19.673  -0.828   0.231   0.996  C9    5ZW   6  
5ZW  C10   C7   C   0  1  Y  N  N  -17.140  -39.135  19.445   2.829   0.342   0.411  C10   5ZW   7  
5ZW  O3    O1   O   0  1  N  N  N  -11.193  -38.482  18.020  -2.555   2.382  -1.258  O3    5ZW   8  
5ZW  C11   C8   C   0  1  Y  N  N  -18.073  -39.957  18.779   3.605   0.883  -0.606  C11   5ZW   9  
5ZW  C12   C9   C   0  1  Y  N  N  -19.446  -39.702  18.871   4.890   0.423  -0.812  C12   5ZW  10  
5ZW  C13   C10  C   0  1  Y  N  N  -19.886  -38.619  19.629   5.406  -0.577  -0.007  C13   5ZW  11  
5ZW  C14   C11  C   0  1  Y  N  N  -18.984  -37.794  20.296   4.636  -1.118   1.008  C14   5ZW  12  
5ZW  C15   C12  C   0  1  Y  N  N  -17.628  -38.054  20.201   3.350  -0.662   1.219  C15   5ZW  13  
5ZW  C18   C13  C   0  1  N  N  N  -10.165  -42.751  17.342  -4.383  -1.613  -0.967  C18   5ZW  14  
5ZW  C21   C14  C   0  1  N  N  N  -11.216  -41.978  15.222  -5.234  -0.549   0.933  C21   5ZW  15  
5ZW  C23   C15  C   0  1  N  N  N  -11.713  -40.822  15.927  -4.228   0.507   0.763  C23   5ZW  16  
5ZW  N17   N1   N   0  1  N  N  N  -10.685  -41.610  17.924  -3.458  -0.655  -1.144  N17   5ZW  17  
5ZW  N20   N2   N   0  1  N  N  N  -10.455  -42.881  15.992  -5.257  -1.572   0.054  N20   5ZW  18  
5ZW  N4    N3   N   0  1  N  N  N  -12.988  -39.654  18.848  -1.158   1.392   0.155  N4    5ZW  19  
5ZW  N7    N4   N   0  1  N  N  N  -15.747  -39.345  19.402   1.530   0.810   0.626  N7    5ZW  20  
5ZW  O19   O2   O   0  1  N  N  N   -9.505  -43.565  17.980  -4.431  -2.541  -1.750  O19   5ZW  21  
5ZW  O22   O3   O   0  1  N  N  N  -11.430  -42.187  14.033  -6.027  -0.506   1.855  O22   5ZW  22  
5ZW  CL16  CL1  CL  0  0  N  N  N  -21.611  -38.252  19.781   7.022  -1.154  -0.269  CL16  5ZW  23  
5ZW  H1    H1   H   0  1  N  N  N  -13.828  -41.213  19.996  -0.082   2.991   1.000  H1    5ZW  24  
5ZW  H2    H2   H   0  1  N  N  N  -13.473  -41.630  18.285  -0.482   3.179  -0.726  H2    5ZW  25  
5ZW  H3    H3   H   0  1  N  N  N  -15.288  -40.168  17.513   1.124   1.439  -1.337  H3    5ZW  26  
5ZW  H4    H4   H   0  1  N  N  N  -15.927  -41.334  18.721   1.951   2.640  -0.316  H4    5ZW  27  
5ZW  H5    H5   H   0  1  N  N  N  -14.907  -37.792  18.269   0.872  -1.081   1.263  H5    5ZW  28  
5ZW  H6    H6   H   0  1  N  N  N  -15.251  -37.392  19.985   0.507  -0.688  -0.434  H6    5ZW  29  
5ZW  H7    H7   H   0  1  N  N  N  -13.415  -38.824  20.734  -1.573  -0.552   0.854  H7    5ZW  30  
5ZW  H8    H8   H   0  1  N  N  N  -12.801  -37.665  19.507  -0.807   0.530   2.044  H8    5ZW  31  
5ZW  H9    H9   H   0  1  N  N  N  -17.724  -40.793  18.191   3.202   1.663  -1.235  H9    5ZW  32  
5ZW  H10   H10  H   0  1  N  N  N  -20.155  -40.337  18.361   5.494   0.843  -1.603  H10   5ZW  33  
5ZW  H11   H11  H   0  1  N  N  N  -19.339  -36.959  20.882   5.041  -1.899   1.635  H11   5ZW  34  
5ZW  H12   H12  H   0  1  N  N  N  -16.930  -37.413  20.718   2.749  -1.085   2.010  H12   5ZW  35  
5ZW  H13   H13  H   0  1  N  N  N  -12.306  -40.082  15.411  -4.176   1.336   1.453  H13   5ZW  36  
5ZW  H14   H14  H   0  1  N  N  N  -10.511  -41.456  18.897  -2.844  -0.718  -1.893  H14   5ZW  37  
5ZW  H15   H15  H   0  1  N  N  N  -10.092  -43.686  15.523  -5.916  -2.277   0.153  H15   5ZW  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5ZW  O22  C21   DOUB  N  N   1  
5ZW  C21  C23   SING  N  N   2  
5ZW  C21  N20   SING  N  N   3  
5ZW  C23  C1    DOUB  N  N   4  
5ZW  N20  C18   SING  N  N   5  
5ZW  C1   N17   SING  N  N   6  
5ZW  C1   C2    SING  N  N   7  
5ZW  C18  N17   SING  N  N   8  
5ZW  C18  O19   DOUB  N  N   9  
5ZW  O3   C2    DOUB  N  N  10  
5ZW  C2   N4    SING  N  N  11  
5ZW  C6   C5    SING  N  N  12  
5ZW  C6   N7    SING  N  N  13  
5ZW  C11  C12   DOUB  Y  N  14  
5ZW  C11  C10   SING  Y  N  15  
5ZW  N4   C5    SING  N  N  16  
5ZW  N4   C9    SING  N  N  17  
5ZW  C12  C13   SING  Y  N  18  
5ZW  C8   N7    SING  N  N  19  
5ZW  C8   C9    SING  N  N  20  
5ZW  N7   C10   SING  N  N  21  
5ZW  C10  C15   DOUB  Y  N  22  
5ZW  C13  CL16  SING  N  N  23  
5ZW  C13  C14   DOUB  Y  N  24  
5ZW  C15  C14   SING  Y  N  25  
5ZW  C5   H1    SING  N  N  26  
5ZW  C5   H2    SING  N  N  27  
5ZW  C6   H3    SING  N  N  28  
5ZW  C6   H4    SING  N  N  29  
5ZW  C8   H5    SING  N  N  30  
5ZW  C8   H6    SING  N  N  31  
5ZW  C9   H7    SING  N  N  32  
5ZW  C9   H8    SING  N  N  33  
5ZW  C11  H9    SING  N  N  34  
5ZW  C12  H10   SING  N  N  35  
5ZW  C14  H11   SING  N  N  36  
5ZW  C15  H12   SING  N  N  37  
5ZW  C23  H13   SING  N  N  38  
5ZW  N17  H14   SING  N  N  39  
5ZW  N20  H15   SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5ZW  SMILES            ACDLabs               12.01  "O=C(C1=CC(=O)NC(=O)N1)N1CCN(CC1)c1ccc(Cl)cc1"  
5ZW  InChI             InChI                 1.03   "InChI=1S/C15H15ClN4O3/c16-10-1-3-11(4-2-10)19-5-7-20(8-6-19)14(22)12-9-13(21)18-15(23)17-12/h1-4,9H,5-8H2,(H2,17,18,21,23)"  
5ZW  InChIKey          InChI                 1.03   UPTYXISDRSIHCH-UHFFFAOYSA-N  
5ZW  SMILES_CANONICAL  CACTVS                3.385  "Clc1ccc(cc1)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3"  
5ZW  SMILES            CACTVS                3.385  "Clc1ccc(cc1)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3"  
5ZW  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl"  
5ZW  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5ZW  "SYSTEMATIC NAME"  ACDLabs               12.01  "6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione"  
5ZW  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "6-[4-(4-chlorophenyl)piperazin-1-yl]carbonyl-1~{H}-pyrimidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5ZW  "Create component"  2021-07-30  RCSB  
5ZW  "Initial release"   2021-11-10  RCSB  
##
