data_5KW
# 
_chem_comp.id                                    5KW 
_chem_comp.name                                  "2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H24 Cl2 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-10-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        487.382 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5KW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5E7R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5KW C01 C1  C  0 1 N N N N N N -21.293 -51.884 -20.797 7.826  1.724  -1.339 C01 5KW 1  
5KW N02 N1  N  0 1 N N N N N N -20.538 -51.457 -21.766 8.265  0.647  -0.442 N02 5KW 2  
5KW C03 C2  C  0 1 N N N N N N -20.639 -50.076 -21.940 7.898  0.939  0.951  C03 5KW 3  
5KW C04 C3  C  0 1 N N N N N N -20.017 -49.316 -20.751 6.373  0.967  1.079  C04 5KW 4  
5KW C05 C4  C  0 1 N N N N N N -19.223 -51.892 -21.638 7.717  -0.648 -0.868 C05 5KW 5  
5KW C06 C5  C  0 1 N N N N N N -18.529 -51.228 -20.432 6.192  -0.621 -0.739 C06 5KW 6  
5KW N07 N2  N  0 1 N N N N N N -18.656 -49.765 -20.445 5.825  -0.329 0.653  N07 5KW 7  
5KW C08 C6  C  0 1 Y N N N N N -17.769 -48.928 -19.578 4.437  -0.367 0.825  C08 5KW 8  
5KW C09 C7  C  0 1 Y N N N N N -18.330 -48.035 -18.663 3.725  -1.508 0.481  C09 5KW 9  
5KW C10 C8  C  0 1 Y N N N N N -17.498 -47.250 -17.849 2.356  -1.546 0.650  C10 5KW 10 
5KW C11 C9  C  0 1 Y N N N N N -16.393 -49.038 -19.684 3.771  0.736  1.345  C11 5KW 11 
5KW C12 C10 C  0 1 Y N N N N N -15.561 -48.252 -18.869 2.401  0.698  1.515  C12 5KW 12 
5KW C13 C11 C  0 1 Y N N N N N -16.121 -47.360 -17.955 1.689  -0.442 1.165  C13 5KW 13 
5KW N14 N3  N  0 1 N N N N N N -15.240 -46.527 -17.092 0.300  -0.479 1.337  N14 5KW 14 
5KW C15 C12 C  0 1 Y N N N N N -13.903 -47.024 -16.700 -0.493 -1.159 0.426  C15 5KW 15 
5KW N16 N4  N  0 1 Y N N N N N -13.006 -46.154 -16.277 0.086  -1.834 -0.556 N16 5KW 16 
5KW C17 C13 C  0 1 Y N N N N N -11.786 -46.559 -15.912 -0.638 -2.496 -1.445 C17 5KW 17 
5KW C18 C14 C  0 1 Y N N N N N -11.494 -47.926 -15.993 -2.018 -2.478 -1.342 C18 5KW 18 
5KW CL1 CL1 CL 0 0 N N N N N N -9.882  -48.525 -15.520 -3.005 -3.333 -2.486 CL1 5KW 19 
5KW C20 C15 C  0 1 Y N N N N N -12.465 -48.817 -16.444 -2.597 -1.758 -0.297 C20 5KW 20 
5KW O21 O1  O  0 1 N N N N N N -12.190 -50.210 -16.534 -3.944 -1.714 -0.157 O21 5KW 21 
5KW C22 C16 C  0 1 Y N N N N N -12.402 -50.649 -17.866 -4.459 -0.913 0.813  C22 5KW 22 
5KW C23 C17 C  0 1 Y N N N N N -13.648 -51.117 -18.251 -4.860 -1.458 2.023  C23 5KW 23 
5KW C24 C18 C  0 1 Y N N N N N -13.857 -51.548 -19.559 -5.384 -0.643 3.009  C24 5KW 24 
5KW C25 C19 C  0 1 Y N N N N N -12.812 -51.509 -20.482 -5.510 0.717  2.792  C25 5KW 25 
5KW C26 C20 C  0 1 Y N N N N N -11.565 -51.041 -20.098 -5.113 1.268  1.589  C26 5KW 26 
5KW C27 C21 C  0 1 Y N N N N N -11.356 -50.609 -18.789 -4.581 0.458  0.597  C27 5KW 27 
5KW N28 N5  N  0 1 N N N N N N -10.047 -50.117 -18.384 -4.177 1.014  -0.624 N28 5KW 28 
5KW C29 C22 C  0 1 N N N N N N -8.839  -50.744 -18.906 -3.656 2.257  -0.659 C29 5KW 29 
5KW C30 C23 C  0 1 N N N N N N -7.465  -50.226 -18.480 -3.344 2.906  -1.982 C30 5KW 30 
5KW O31 O2  O  0 1 N N N N N N -8.922  -51.656 -19.662 -3.439 2.852  0.375  O31 5KW 31 
5KW N32 N6  N  0 1 Y N N N N N -13.658 -48.333 -16.789 -1.810 -1.122 0.562  N32 5KW 32 
5KW H1  H1  H  0 1 N N N N N N -21.181 -52.974 -20.697 6.738  1.785  -1.329 H1  5KW 33 
5KW H2  H2  H  0 1 N N N N N N -20.993 -51.397 -19.857 8.246  2.672  -1.002 H2  5KW 34 
5KW H3  H3  H  0 1 N N N N N N -22.343 -51.642 -21.017 8.169  1.516  -2.353 H3  5KW 35 
5KW H5  H5  H  0 1 N N N N N N -20.112 -49.791 -22.863 8.304  0.166  1.603  H5  5KW 36 
5KW H6  H6  H  0 1 N N N N N N -21.701 -49.802 -22.025 8.305  1.909  1.238  H6  5KW 37 
5KW H7  H7  H  0 1 N N N N N N -19.988 -48.244 -20.995 6.099  1.154  2.117  H7  5KW 38 
5KW H8  H8  H  0 1 N N N N N N -20.648 -49.473 -19.864 5.970  1.758  0.447  H8  5KW 39 
5KW H9  H9  H  0 1 N N N N N N -19.218 -52.983 -21.498 7.991  -0.836 -1.906 H9  5KW 40 
5KW H10 H10 H  0 1 N N N N N N -18.670 -51.637 -22.554 8.121  -1.439 -0.236 H10 5KW 41 
5KW H11 H11 H  0 1 N N N N N N -18.984 -51.613 -19.507 5.786  0.152  -1.392 H11 5KW 42 
5KW H12 H12 H  0 1 N N N N N N -17.461 -51.489 -20.452 5.785  -1.590 -1.027 H12 5KW 43 
5KW H13 H13 H  0 1 N N N N N N -19.403 -47.948 -18.581 4.244  -2.367 0.080  H13 5KW 44 
5KW H14 H14 H  0 1 N N N N N N -17.931 -46.560 -17.140 1.802  -2.434 0.383  H14 5KW 45 
5KW H15 H15 H  0 1 N N N N N N -15.959 -49.728 -20.393 4.325  1.622  1.617  H15 5KW 46 
5KW H16 H16 H  0 1 N N N N N N -14.488 -48.339 -18.950 1.884  1.555  1.919  H16 5KW 47 
5KW H17 H17 H  0 1 N N N N N N -15.552 -45.631 -16.777 -0.108 -0.030 2.093  H17 5KW 48 
5KW H18 H18 H  0 1 N N N N N N -11.047 -45.852 -15.565 -0.158 -3.044 -2.243 H18 5KW 49 
5KW H19 H19 H  0 1 N N N N N N -14.457 -51.148 -17.537 -4.763 -2.520 2.196  H19 5KW 50 
5KW H20 H20 H  0 1 N N N N N N -14.829 -51.912 -19.859 -5.696 -1.069 3.951  H20 5KW 51 
5KW H21 H21 H  0 1 N N N N N N -12.974 -51.843 -21.496 -5.924 1.349  3.564  H21 5KW 52 
5KW H22 H22 H  0 1 N N N N N N -10.756 -51.011 -20.813 -5.212 2.331  1.422  H22 5KW 53 
5KW H23 H23 H  0 1 N N N N N N -9.977  -49.349 -17.748 -4.272 0.505  -1.444 H23 5KW 54 
5KW H24 H24 H  0 1 N N N N N N -7.116  -50.785 -17.599 -2.616 2.300  -2.522 H24 5KW 55 
5KW H25 H25 H  0 1 N N N N N N -6.749  -50.356 -19.305 -4.258 2.987  -2.572 H25 5KW 56 
5KW CL2 CL2 CL 0 0 N Y N N N N -7.595  -48.618 -18.104 -2.664 4.552  -1.698 CL2 5KW 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5KW C03 N02 SING N N 1  
5KW C03 C04 SING N N 2  
5KW N02 C05 SING N N 3  
5KW N02 C01 SING N N 4  
5KW C05 C06 SING N N 5  
5KW C04 N07 SING N N 6  
5KW C25 C26 DOUB Y N 7  
5KW C25 C24 SING Y N 8  
5KW N07 C06 SING N N 9  
5KW N07 C08 SING N N 10 
5KW C26 C27 SING Y N 11 
5KW C11 C08 DOUB Y N 12 
5KW C11 C12 SING Y N 13 
5KW O31 C29 DOUB N N 14 
5KW C08 C09 SING Y N 15 
5KW C24 C23 DOUB Y N 16 
5KW C29 C30 SING N N 17 
5KW C29 N28 SING N N 18 
5KW C12 C13 DOUB Y N 19 
5KW C27 N28 SING N N 20 
5KW C27 C22 DOUB Y N 21 
5KW C09 C10 DOUB Y N 22 
5KW C23 C22 SING Y N 23 
5KW C13 C10 SING Y N 24 
5KW C13 N14 SING N N 25 
5KW C22 O21 SING N N 26 
5KW N14 C15 SING N N 27 
5KW N32 C15 DOUB Y N 28 
5KW N32 C20 SING Y N 29 
5KW C15 N16 SING Y N 30 
5KW O21 C20 SING N N 31 
5KW C20 C18 DOUB Y N 32 
5KW N16 C17 DOUB Y N 33 
5KW C18 C17 SING Y N 34 
5KW C18 CL1 SING N N 35 
5KW C01 H1  SING N N 36 
5KW C01 H2  SING N N 37 
5KW C01 H3  SING N N 38 
5KW C03 H5  SING N N 39 
5KW C03 H6  SING N N 40 
5KW C04 H7  SING N N 41 
5KW C04 H8  SING N N 42 
5KW C05 H9  SING N N 43 
5KW C05 H10 SING N N 44 
5KW C06 H11 SING N N 45 
5KW C06 H12 SING N N 46 
5KW C09 H13 SING N N 47 
5KW C10 H14 SING N N 48 
5KW C11 H15 SING N N 49 
5KW C12 H16 SING N N 50 
5KW N14 H17 SING N N 51 
5KW C17 H18 SING N N 52 
5KW C23 H19 SING N N 53 
5KW C24 H20 SING N N 54 
5KW C25 H21 SING N N 55 
5KW C26 H22 SING N N 56 
5KW N28 H23 SING N N 57 
5KW C30 H24 SING N N 58 
5KW C30 H25 SING N N 59 
5KW C30 CL2 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5KW SMILES           ACDLabs              12.01 "CN1CCN(CC1)c2ccc(cc2)Nc4ncc(Cl)c(Oc3ccccc3NC(CCl)=O)n4"                                                                                                                   
5KW InChI            InChI                1.03  "InChI=1S/C23H24Cl2N6O2/c1-30-10-12-31(13-11-30)17-8-6-16(7-9-17)27-23-26-15-18(25)22(29-23)33-20-5-3-2-4-19(20)28-21(32)14-24/h2-9,15H,10-14H2,1H3,(H,28,32)(H,26,27,29)" 
5KW InChIKey         InChI                1.03  NQUKOQARFOAHTI-UHFFFAOYSA-N                                                                                                                                                
5KW SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)CCl)n3)cc2"                                                                                                                   
5KW SMILES           CACTVS               3.385 "CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)CCl)n3)cc2"                                                                                                                   
5KW SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)CCl)Cl"                                                                                                                   
5KW SMILES           "OpenEye OEToolkits" 1.9.2 "CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)CCl)Cl"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5KW "SYSTEMATIC NAME" ACDLabs              12.01 "2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide"      
5KW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-chloranyl-N-[2-[5-chloranyl-2-[[4-(4-methylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]oxyphenyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5KW "Create component" 2015-10-15 RCSB 
5KW "Initial release"  2016-09-21 RCSB 
5KW "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            5KW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C30 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
