data_5IW
# 
_chem_comp.id                                    5IW 
_chem_comp.name                                  "(2S)-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(2S)-3-phenyl-2-[[(E)-3-phenylprop-2-enoyl]amino]propanoyl]amino]pentanamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H40 N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        560.684 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5IW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7WOH 
_chem_comp.pdbx_subcomponent_list                "TCA PHE LEU ELF" 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5IW C30 C24 C 0 1 N N N N N N 15.023 -8.466  -21.382 3.995  0.077  0.261  C1   TCA 1  
5IW O39 O3  O 0 1 N N N N N N 14.119 -8.323  -20.628 4.232  0.983  1.038  O    TCA 2  
5IW C31 C25 C 0 1 N N N N N N 15.019 -9.641  -22.342 5.095  -0.697 -0.318 C2   TCA 3  
5IW C32 C26 C 0 1 N N N N N N 15.412 -10.602 -21.534 6.370  -0.407 0.011  C3   TCA 4  
5IW C33 C27 C 0 1 Y N N N N N 15.553 -12.005 -22.097 7.476  -1.185 -0.570 C31  TCA 5  
5IW C38 C32 C 0 1 Y N N N N N 16.474 -12.855 -21.522 8.799  -0.887 -0.232 C32  TCA 6  
5IW C37 C31 C 0 1 Y N N N N N 16.661 -14.139 -21.979 9.829  -1.625 -0.776 C33  TCA 7  
5IW C36 C30 C 0 1 Y N N N N N 15.878 -14.578 -23.030 9.556  -2.650 -1.664 C34  TCA 8  
5IW C35 C29 C 0 1 Y N N N N N 14.946 -13.709 -23.599 8.249  -2.948 -2.009 C35  TCA 9  
5IW C34 C28 C 0 1 Y N N N N N 14.761 -12.415 -23.148 7.208  -2.223 -1.469 C36  TCA 10 
5IW N29 N4  N 0 1 N N N N N N 16.164 -7.580  -21.336 2.721  -0.213 -0.068 N    PHE 11 
5IW C21 C6  C 0 1 N N S N N N 16.123 -6.545  -20.330 1.620  0.562  0.511  CA   PHE 12 
5IW C20 C5  C 0 1 N N N N N N 16.075 -5.134  -20.904 0.365  -0.272 0.512  C    PHE 13 
5IW O40 O4  O 0 1 N N N N N N 15.477 -4.297  -20.325 0.387  -1.402 0.072  O    PHE 14 
5IW C22 C7  C 0 1 N N N N N N 17.407 -6.737  -19.530 1.393  1.825  -0.322 CB   PHE 15 
5IW C23 C21 C 0 1 Y N N N N N 17.539 -8.200  -19.091 2.603  2.717  -0.223 CG   PHE 16 
5IW C24 C8  C 0 1 Y N N N N N 18.456 -9.039  -19.697 3.637  2.583  -1.131 CD1  PHE 17 
5IW C28 C10 C 0 1 Y N N N N N 16.712 -8.684  -18.079 2.681  3.669  0.776  CD2  PHE 18 
5IW C25 C22 C 0 1 Y N N N N N 18.554 -10.362 -19.283 4.747  3.401  -1.041 CE1  PHE 19 
5IW C27 C23 C 0 1 Y N N N N N 16.812 -10.002 -17.667 3.791  4.487  0.867  CE2  PHE 20 
5IW C26 C9  C 0 1 Y N N N N N 17.733 -10.843 -18.272 4.825  4.353  -0.041 CZ   PHE 21 
5IW N19 N3  N 0 1 N N N N N N 16.768 -4.829  -22.151 -0.783 0.238  1.001  N    LEU 22 
5IW C14 C18 C 0 1 N N S N N N 16.727 -3.479  -22.684 -2.003 -0.573 1.002  CA   LEU 23 
5IW C13 C2  C 0 1 N N N N N N 15.316 -3.106  -23.139 -3.207 0.333  0.996  C    LEU 24 
5IW O41 O5  O 0 1 N N N N N N 14.738 -3.751  -23.950 -3.061 1.537  0.992  O    LEU 25 
5IW C15 C3  C 0 1 N N N N N N 17.702 -3.333  -23.853 -2.031 -1.451 2.255  CB   LEU 26 
5IW C16 C19 C 0 1 N N N N N N 19.145 -3.585  -23.390 -0.878 -2.455 2.199  CG   LEU 27 
5IW C17 C4  C 0 1 N N N N N N 19.523 -2.661  -22.230 -0.830 -3.249 3.506  CD1  LEU 28 
5IW C18 C20 C 0 1 N N N N N N 20.159 -3.473  -24.534 -1.093 -3.415 1.027  CD2  LEU 29 
5IW C07 C16 C 0 1 N N N N N N 11.537 -5.234  -21.223 -6.293 0.794  -3.384 C6   ELF 30 
5IW C03 C12 C 0 1 N N S N N N 13.387 -1.496  -22.919 -5.619 0.685  0.990  C11  ELF 31 
5IW C06 C15 C 0 1 N N N N N N 11.789 -3.994  -21.933 -6.341 1.061  -1.875 C13  ELF 32 
5IW C10 C1  C 0 1 N N N N N N 11.491 -2.736  -19.766 -7.569 -1.094 -1.773 C15  ELF 33 
5IW C04 C13 C 0 1 N N N N N N 12.342 -1.599  -21.793 -6.793 -0.034 0.324  C17  ELF 34 
5IW C02 C11 C 0 1 N N N N N N 13.542 -0.017  -23.315 -5.986 1.041  2.408  C24  ELF 35 
5IW C05 C14 C 0 1 N N S N N N 12.332 -2.995  -21.072 -6.470 -0.281 -1.151 C25  ELF 36 
5IW C08 C17 C 0 1 N N N N N N 10.461 -5.095  -20.204 -7.655 0.262  -3.831 C27  ELF 37 
5IW N12 N1  N 0 1 N N N N N N 14.712 -1.932  -22.531 -4.447 -0.195 0.996  N3   ELF 38 
5IW N09 N2  N 0 1 N N N N N N 10.505 -3.831  -19.346 -8.072 -0.848 -2.983 N4   ELF 39 
5IW O01 O1  O 0 1 N N N N N N 14.049 0.859   -22.660 -5.337 0.605  3.328  O3   ELF 40 
5IW O11 O2  O 0 1 N N N N N N 11.619 -1.713  -19.184 -8.020 -2.027 -1.143 O4   ELF 41 
5IW H30 H30 H 0 1 N N N N N N 14.765 -9.678  -23.391 4.885  -1.501 -1.008 H2   TCA 42 
5IW H32 H32 H 0 1 N N N N N N 15.629 -10.398 -20.496 6.580  0.397  0.701  H3   TCA 43 
5IW H38 H38 H 0 1 N N N N N N 17.065 -12.503 -20.690 9.014  -0.084 0.458  H32  TCA 44 
5IW H37 H37 H 0 1 N N N N N N 17.399 -14.786 -21.529 10.852 -1.399 -0.512 H33  TCA 45 
5IW H36 H36 H 0 1 N N N N N N 15.986 -15.584 -23.407 10.368 -3.221 -2.091 H34  TCA 46 
5IW H35 H35 H 0 1 N N N N N N 14.345 -14.061 -24.425 8.044  -3.750 -2.703 H35  TCA 47 
5IW H34 H34 H 0 1 N N N N N N 14.031 -11.758 -23.597 6.189  -2.457 -1.738 H36  TCA 48 
5IW H40 H40 H 0 1 N N N N N N 16.936 -7.678  -21.964 2.532  -0.935 -0.688 H    PHE 49 
5IW H7  H7  H 0 1 N N N N N N 15.259 -6.694  -19.666 1.872  0.841  1.534  HA   PHE 50 
5IW H8  H8  H 0 1 N N N N N N 18.270 -6.465  -20.156 1.229  1.549  -1.364 HB2  PHE 51 
5IW H9  H9  H 0 1 N N N N N N 17.382 -6.091  -18.640 0.518  2.356  0.055  HB3  PHE 52 
5IW H10 H10 H 0 1 N N N N N N 19.092 -8.668  -20.487 3.578  1.836  -1.910 HD1  PHE 53 
5IW H12 H12 H 0 1 N N N N N N 15.990 -8.028  -17.614 1.873  3.773  1.486  HD2  PHE 54 
5IW H28 H28 H 0 1 N N N N N N 19.272 -11.019 -19.750 5.555  3.296  -1.750 HE1  PHE 55 
5IW H29 H29 H 0 1 N N N N N N 16.175 -10.373 -16.878 3.852  5.230  1.648  HE2  PHE 56 
5IW H11 H11 H 0 1 N N N N N N 17.812 -11.873 -17.957 5.692  4.992  0.030  HZ   PHE 57 
5IW H39 H39 H 0 1 N N N N N N 17.269 -5.546  -22.636 -0.800 1.142  1.352  H2   LEU 58 
5IW H23 H23 H 0 1 N N N N N N 17.030 -2.773  -21.897 -2.020 -1.205 0.114  HA   LEU 59 
5IW H2  H2  H 0 1 N N N N N N 17.626 -2.314  -24.261 -1.925 -0.824 3.140  HB2  LEU 60 
5IW H3  H3  H 0 1 N N N N N N 17.441 -4.062  -24.634 -2.978 -1.988 2.301  HB3  LEU 61 
5IW H24 H24 H 0 1 N N N N N N 19.191 -4.618  -23.014 0.063  -1.921 2.064  HG   LEU 62 
5IW H4  H4  H 0 1 N N N N N N 18.781 -2.761  -21.424 -1.770 -3.783 3.642  HD11 LEU 63 
5IW H5  H5  H 0 1 N N N N N N 20.517 -2.939  -21.849 -0.008 -3.964 3.467  HD12 LEU 64 
5IW H6  H6  H 0 1 N N N N N N 19.543 -1.619  -22.583 -0.676 -2.565 4.341  HD13 LEU 65 
5IW H25 H25 H 0 1 N N N N N N 21.171 -3.662  -24.147 -2.034 -3.949 1.163  HD21 LEU 66 
5IW H26 H26 H 0 1 N N N N N N 19.919 -4.214  -25.310 -1.127 -2.849 0.096  HD22 LEU 67 
5IW H27 H27 H 0 1 N N N N N N 20.114 -2.462  -24.966 -0.272 -4.130 0.988  HD23 LEU 68 
5IW H20 H20 H 0 1 N N N N N N 11.238 -6.003  -21.950 -6.071 1.722  -3.913 H1   ELF 69 
5IW H21 H21 H 0 1 N N N N N N 12.463 -5.547  -20.719 -5.522 0.055  -3.601 H2   ELF 70 
5IW H14 H14 H 0 1 N N N N N N 13.035 -2.068  -23.790 -5.387 1.594  0.436  H3   ELF 71 
5IW H18 H18 H 0 1 N N N N N N 12.502 -4.188  -22.748 -7.200 1.689  -1.640 H4   ELF 72 
5IW H19 H19 H 0 1 N N N N N N 10.842 -3.625  -22.354 -5.424 1.561  -1.561 H5   ELF 73 
5IW H15 H15 H 0 1 N N N N N N 12.559 -0.822  -21.045 -6.966 -0.987 0.823  H6   ELF 74 
5IW H16 H16 H 0 1 N N N N N N 11.346 -1.424  -22.225 -7.688 0.584  0.401  H7   ELF 75 
5IW H13 H13 H 0 1 N N N N N N 13.155 0.266   -24.283 -6.830 1.687  2.601  H8   ELF 76 
5IW H17 H17 H 0 1 N N N N N N 13.362 -3.250  -20.782 -5.529 -0.825 -1.228 H9   ELF 77 
5IW H22 H22 H 0 1 N N N N N N 9.496  -5.110  -20.731 -8.393 1.061  -3.767 H10  ELF 78 
5IW H41 H41 H 0 1 N N N N N N 10.524 -5.961  -19.529 -7.587 -0.080 -4.864 H11  ELF 79 
5IW H1  H1  H 0 1 N N N N N N 15.217 -1.420  -21.837 -4.564 -1.158 1.000  H12  ELF 80 
5IW H31 H31 H 0 1 N N N N N N 9.916  -3.723  -18.545 -8.755 -1.447 -3.322 H15  ELF 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5IW C18 C16 SING N N 1  
5IW O41 C13 DOUB N N 2  
5IW C15 C16 SING N N 3  
5IW C15 C14 SING N N 4  
5IW C35 C34 DOUB Y N 5  
5IW C35 C36 SING Y N 6  
5IW C16 C17 SING N N 7  
5IW C02 C03 SING N N 8  
5IW C02 O01 DOUB N N 9  
5IW C34 C33 SING Y N 10 
5IW C13 C14 SING N N 11 
5IW C13 N12 SING N N 12 
5IW C36 C37 DOUB Y N 13 
5IW C03 N12 SING N N 14 
5IW C03 C04 SING N N 15 
5IW C14 N19 SING N N 16 
5IW C31 C32 DOUB N E 17 
5IW C31 C30 SING N N 18 
5IW N19 C20 SING N N 19 
5IW C33 C32 SING N N 20 
5IW C33 C38 DOUB Y N 21 
5IW C37 C38 SING Y N 22 
5IW C06 C07 SING N N 23 
5IW C06 C05 SING N N 24 
5IW C04 C05 SING N N 25 
5IW C30 N29 SING N N 26 
5IW C30 O39 DOUB N N 27 
5IW N29 C21 SING N N 28 
5IW C07 C08 SING N N 29 
5IW C05 C10 SING N N 30 
5IW C20 C21 SING N N 31 
5IW C20 O40 DOUB N N 32 
5IW C21 C22 SING N N 33 
5IW C08 N09 SING N N 34 
5IW C10 N09 SING N N 35 
5IW C10 O11 DOUB N N 36 
5IW C24 C25 DOUB Y N 37 
5IW C24 C23 SING Y N 38 
5IW C22 C23 SING N N 39 
5IW C25 C26 SING Y N 40 
5IW C23 C28 DOUB Y N 41 
5IW C26 C27 DOUB Y N 42 
5IW C28 C27 SING Y N 43 
5IW N12 H1  SING N N 44 
5IW C15 H2  SING N N 45 
5IW C15 H3  SING N N 46 
5IW C17 H4  SING N N 47 
5IW C17 H5  SING N N 48 
5IW C17 H6  SING N N 49 
5IW C21 H7  SING N N 50 
5IW C22 H8  SING N N 51 
5IW C22 H9  SING N N 52 
5IW C24 H10 SING N N 53 
5IW C26 H11 SING N N 54 
5IW C28 H12 SING N N 55 
5IW C02 H13 SING N N 56 
5IW C03 H14 SING N N 57 
5IW C04 H15 SING N N 58 
5IW C04 H16 SING N N 59 
5IW C05 H17 SING N N 60 
5IW C06 H18 SING N N 61 
5IW C06 H19 SING N N 62 
5IW C07 H20 SING N N 63 
5IW C07 H21 SING N N 64 
5IW C08 H22 SING N N 65 
5IW C14 H23 SING N N 66 
5IW C16 H24 SING N N 67 
5IW C18 H25 SING N N 68 
5IW C18 H26 SING N N 69 
5IW C18 H27 SING N N 70 
5IW C25 H28 SING N N 71 
5IW C27 H29 SING N N 72 
5IW C31 H30 SING N N 73 
5IW C32 H32 SING N N 74 
5IW C34 H34 SING N N 75 
5IW C35 H35 SING N N 76 
5IW C36 H36 SING N N 77 
5IW C37 H37 SING N N 78 
5IW C38 H38 SING N N 79 
5IW N19 H39 SING N N 80 
5IW N29 H40 SING N N 81 
5IW C08 H41 SING N N 82 
5IW N09 H31 SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5IW InChI            InChI                1.03  "InChI=1S/C32H40N4O5/c1-22(2)18-27(31(40)34-26(21-37)20-25-14-9-17-33-30(25)39)36-32(41)28(19-24-12-7-4-8-13-24)35-29(38)16-15-23-10-5-3-6-11-23/h3-8,10-13,15-16,21-22,25-28H,9,14,17-20H2,1-2H3,(H,33,39)(H,34,40)(H,35,38)(H,36,41)/t25-,26-,27-,28-/m0/s1" 
5IW InChIKey         InChI                1.03  ZRDHUXRBDHYVKZ-LJWNLINESA-N                                                                                                                                                                                                                                    
5IW SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)\C=C\c2ccccc2)C(=O)N[C@@H](C[C@@H]3CCCNC3=O)C=O"                                                                                                                                                                      
5IW SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)[CH](Cc1ccccc1)NC(=O)C=Cc2ccccc2)C(=O)N[CH](C[CH]3CCCNC3=O)C=O"                                                                                                                                                                              
5IW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCCNC1=O)C=O)NC(=O)[C@H](Cc2ccccc2)NC(=O)/C=C/c3ccccc3"                                                                                                                                                                     
5IW SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCCNC1=O)C=O)NC(=O)C(Cc2ccccc2)NC(=O)C=Cc3ccccc3"                                                                                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           5IW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(2~{S})-3-phenyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]pentanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5IW "Create component" 2022-02-02 PDBJ 
5IW "Initial release"  2022-04-13 RCSB 
5IW "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            5IW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C02 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
