data_4XW
#

_chem_comp.id                                   4XW
_chem_comp.name                                 "(5S,6S,9R,13R)-2,3-didehydro-5,6,7,8,9,10,11,12,13,14-decahydroretinoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H36 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "9-cis-13,14-dihydroretinoic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-06-18
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       308.499
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4XW
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4ZSH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4XW  C1   C1   C  0  1  N  N  N  64.249  44.991  32.688  -5.195   0.820  -0.136  C1   4XW   1  
4XW  C2   C2   C  0  1  N  N  N  64.783  44.923  34.099  -5.549   0.420   1.267  C2   4XW   2  
4XW  C3   C3   C  0  1  N  N  N  63.760  45.119  35.202  -5.168  -0.684   1.824  C3   4XW   3  
4XW  C4   C4   C  0  1  N  N  N  62.411  45.663  34.803  -4.312  -1.715   1.149  C4   4XW   4  
4XW  C5   C5   C  0  1  N  N  S  62.587  46.694  33.731  -4.317  -1.494  -0.365  C5   4XW   5  
4XW  C6   C6   C  0  1  N  N  S  63.253  46.143  32.460  -4.016  -0.015  -0.640  C6   4XW   6  
4XW  C7   C7   C  0  1  N  N  N  62.608  46.128  31.018  -2.741   0.396   0.098  C7   4XW   7  
4XW  C8   C8   C  0  1  N  N  N  61.285  46.337  30.691  -1.520  -0.121  -0.665  C8   4XW   8  
4XW  C9   C9   C  0  1  N  N  R  61.087  46.371  29.174  -0.245   0.414  -0.011  C9   4XW   9  
4XW  C10  C10  C  0  1  N  N  N  59.649  46.606  28.726   0.977  -0.202  -0.696  C10  4XW  10  
4XW  C11  C11  C  0  1  N  N  N  58.591  46.089  29.719   2.247   0.235   0.037  C11  4XW  11  
4XW  C12  C12  C  0  1  N  N  N  57.278  46.036  29.307   3.468  -0.381  -0.647  C12  4XW  12  
4XW  C13  C13  C  0  1  N  N  R  56.322  45.050  29.984   4.738   0.056   0.086  C13  4XW  13  
4XW  C14  C14  C  0  1  N  N  N  55.051  44.874  29.165   5.966  -0.456  -0.671  C14  4XW  14  
4XW  C15  C15  C  0  1  N  N  N  53.700  44.915  29.882   7.216   0.076  -0.019  C15  4XW  15  
4XW  C16  C16  C  0  1  N  N  N  63.727  43.628  32.276  -4.814   2.301  -0.161  C16  4XW  16  
4XW  C17  C17  C  0  1  N  N  N  65.406  45.402  31.825  -6.403   0.594  -1.047  C17  4XW  17  
4XW  C18  C18  C  0  1  N  N  N  61.384  47.601  33.514  -3.244  -2.371  -1.016  C18  4XW  18  
4XW  C19  C19  C  0  1  N  N  N  62.030  47.293  28.430  -0.197   1.936  -0.156  C19  4XW  19  
4XW  C20  C20  C  0  1  N  N  N  56.136  45.376  31.436   4.734  -0.522   1.502  C20  4XW  20  
4XW  O21  O1   O  0  1  N  N  N  53.371  43.812  30.650   8.421  -0.245  -0.516  O21  4XW  21  
4XW  O22  O2   O  0  1  N  N  N  53.065  46.135  30.034   7.133   0.792   0.951  O22  4XW  22  
4XW  H1   H1   H  0  1  N  N  N  65.827  44.746  34.310  -6.158   1.097   1.848  H1   4XW  23  
4XW  H2   H2   H  0  1  N  N  N  63.988  44.879  36.230  -5.486  -0.875   2.839  H2   4XW  24  
4XW  H3   H3   H  0  1  N  N  N  61.927  46.122  35.678  -3.291  -1.638   1.522  H3   4XW  25  
4XW  H4   H4   H  0  1  N  N  N  61.782  44.844  34.424  -4.703  -2.709   1.368  H4   4XW  26  
4XW  H5   H5   H  0  1  N  N  N  63.349  47.372  34.144  -5.295  -1.751  -0.770  H5   4XW  27  
4XW  H6   H6   H  0  1  N  N  N  63.980  46.952  32.297  -3.889   0.140  -1.712  H6   4XW  28  
4XW  H7   H7   H  0  1  N  N  N  62.844  45.132  30.614  -2.694   1.484   0.164  H7   4XW  29  
4XW  H8   H8   H  0  1  N  N  N  63.162  46.893  30.454  -2.749  -0.028   1.102  H8   4XW  30  
4XW  H9   H9   H  0  1  N  N  N  60.958  47.297  31.117  -1.511  -1.211  -0.641  H9   4XW  31  
4XW  H10  H10  H  0  1  N  N  N  60.678  45.523  31.114  -1.568   0.218  -1.700  H10  4XW  32  
4XW  H11  H11  H  0  1  N  N  N  61.336  45.357  28.828  -0.241   0.150   1.046  H11  4XW  33  
4XW  H12  H12  H  0  1  N  N  N  59.500  47.688  28.594   0.898  -1.289  -0.670  H12  4XW  34  
4XW  H13  H13  H  0  1  N  N  N  59.499  46.095  27.763   1.021   0.134  -1.732  H13  4XW  35  
4XW  H14  H14  H  0  1  N  N  N  58.884  45.068  30.004   2.325   1.322   0.011  H14  4XW  36  
4XW  H15  H15  H  0  1  N  N  N  58.628  46.742  30.604   2.202  -0.101   1.073  H15  4XW  37  
4XW  H16  H16  H  0  1  N  N  N  56.856  47.042  29.449   3.390  -1.468  -0.622  H16  4XW  38  
4XW  H17  H17  H  0  1  N  N  N  57.287  45.790  28.235   3.513  -0.044  -1.683  H17  4XW  39  
4XW  H18  H18  H  0  1  N  N  N  56.832  44.076  29.956   4.772   1.145   0.137  H18  4XW  40  
4XW  H19  H19  H  0  1  N  N  N  55.122  43.897  28.664   5.979  -1.546  -0.646  H19  4XW  41  
4XW  H20  H20  H  0  1  N  N  N  55.040  45.673  28.409   5.923  -0.117  -1.706  H20  4XW  42  
4XW  H21  H21  H  0  1  N  N  N  62.881  43.348  32.921  -3.957   2.467   0.492  H21  4XW  43  
4XW  H22  H22  H  0  1  N  N  N  63.393  43.665  31.229  -4.557   2.593  -1.179  H22  4XW  44  
4XW  H23  H23  H  0  1  N  N  N  64.529  42.882  32.379  -5.657   2.899   0.187  H23  4XW  45  
4XW  H24  H24  H  0  1  N  N  N  65.767  46.392  32.142  -7.240   1.198  -0.696  H24  4XW  46  
4XW  H25  H25  H  0  1  N  N  N  66.218  44.666  31.925  -6.148   0.884  -2.066  H25  4XW  47  
4XW  H26  H26  H  0  1  N  N  N  65.082  45.449  30.775  -6.681  -0.460  -1.027  H26  4XW  48  
4XW  H27  H27  H  0  1  N  N  N  60.993  47.932  34.488  -3.653  -3.364  -1.206  H27  4XW  49  
4XW  H28  H28  H  0  1  N  N  N  61.688  48.478  32.924  -2.930  -1.921  -1.958  H28  4XW  50  
4XW  H29  H29  H  0  1  N  N  N  60.601  47.049  32.974  -2.387  -2.452  -0.348  H29  4XW  51  
4XW  H30  H30  H  0  1  N  N  N  63.062  47.111  28.765  -1.068   2.375   0.331  H30  4XW  52  
4XW  H31  H31  H  0  1  N  N  N  61.955  47.100  27.350   0.711   2.318   0.310  H31  4XW  53  
4XW  H32  H32  H  0  1  N  N  N  61.758  48.339  28.635  -0.202   2.201  -1.214  H32  4XW  54  
4XW  H33  H33  H  0  1  N  N  N  57.119  45.478  31.918   5.639  -0.210   2.024  H33  4XW  55  
4XW  H34  H34  H  0  1  N  N  N  55.581  46.321  31.531   3.860  -0.156   2.041  H34  4XW  56  
4XW  H35  H35  H  0  1  N  N  N  55.571  44.568  31.924   4.701  -1.610   1.451  H35  4XW  57  
4XW  H36  H36  H  0  1  N  N  N  52.676  44.043  31.255   9.193   0.121  -0.064  H36  4XW  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4XW  C19  C9   SING  N  N   1  
4XW  C10  C9   SING  N  N   2  
4XW  C10  C11  SING  N  N   3  
4XW  C14  C15  SING  N  N   4  
4XW  C14  C13  SING  N  N   5  
4XW  C9   C8   SING  N  N   6  
4XW  C12  C11  SING  N  N   7  
4XW  C12  C13  SING  N  N   8  
4XW  C15  O22  DOUB  N  N   9  
4XW  C15  O21  SING  N  N  10  
4XW  C13  C20  SING  N  N  11  
4XW  C8   C7   SING  N  N  12  
4XW  C7   C6   SING  N  N  13  
4XW  C17  C1   SING  N  N  14  
4XW  C16  C1   SING  N  N  15  
4XW  C6   C1   SING  N  N  16  
4XW  C6   C5   SING  N  N  17  
4XW  C1   C2   SING  N  N  18  
4XW  C18  C5   SING  N  N  19  
4XW  C5   C4   SING  N  N  20  
4XW  C2   C3   DOUB  N  N  21  
4XW  C4   C3   SING  N  N  22  
4XW  C2   H1   SING  N  N  23  
4XW  C3   H2   SING  N  N  24  
4XW  C4   H3   SING  N  N  25  
4XW  C4   H4   SING  N  N  26  
4XW  C5   H5   SING  N  N  27  
4XW  C6   H6   SING  N  N  28  
4XW  C7   H7   SING  N  N  29  
4XW  C7   H8   SING  N  N  30  
4XW  C8   H9   SING  N  N  31  
4XW  C8   H10  SING  N  N  32  
4XW  C9   H11  SING  N  N  33  
4XW  C10  H12  SING  N  N  34  
4XW  C10  H13  SING  N  N  35  
4XW  C11  H14  SING  N  N  36  
4XW  C11  H15  SING  N  N  37  
4XW  C12  H16  SING  N  N  38  
4XW  C12  H17  SING  N  N  39  
4XW  C13  H18  SING  N  N  40  
4XW  C14  H19  SING  N  N  41  
4XW  C14  H20  SING  N  N  42  
4XW  C16  H21  SING  N  N  43  
4XW  C16  H22  SING  N  N  44  
4XW  C16  H23  SING  N  N  45  
4XW  C17  H24  SING  N  N  46  
4XW  C17  H25  SING  N  N  47  
4XW  C17  H26  SING  N  N  48  
4XW  C18  H27  SING  N  N  49  
4XW  C18  H28  SING  N  N  50  
4XW  C18  H29  SING  N  N  51  
4XW  C19  H30  SING  N  N  52  
4XW  C19  H31  SING  N  N  53  
4XW  C19  H32  SING  N  N  54  
4XW  C20  H33  SING  N  N  55  
4XW  C20  H34  SING  N  N  56  
4XW  C20  H35  SING  N  N  57  
4XW  O21  H36  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4XW  SMILES            ACDLabs               12.01  "C1(C=CCC(C1CCC(CCCC(C)CC(=O)O)C)C)(C)C"  
4XW  InChI             InChI                 1.03   "InChI=1S/C20H36O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h7,13,15-18H,6,8-12,14H2,1-5H3,(H,21,22)/t15-,16-,17+,18+/m1/s1"  
4XW  InChIKey          InChI                 1.03   IUMIJQXLDMMXRF-BDXSIMOUSA-N  
4XW  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](CCC[C@@H](C)CC(O)=O)CC[C@H]1[C@@H](C)CC=CC1(C)C"  
4XW  SMILES            CACTVS                3.385  "C[CH](CCC[CH](C)CC(O)=O)CC[CH]1[CH](C)CC=CC1(C)C"  
4XW  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C[C@H]1CC=CC([C@H]1CC[C@H](C)CCC[C@@H](C)CC(=O)O)(C)C"  
4XW  SMILES            "OpenEye OEToolkits"  1.9.2  "CC1CC=CC(C1CCC(C)CCCC(C)CC(=O)O)(C)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4XW  "SYSTEMATIC NAME"  ACDLabs               12.01  "(5S,6S,9R,13R)-2,3-didehydro-5,6,7,8,9,10,11,12,13,14-decahydroretinoic acid"  
4XW  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(3R,7R)-3,7-dimethyl-9-[(1S,6S)-2,2,6-trimethylcyclohex-3-en-1-yl]nonanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4XW  "Create component"  2015-06-18  EBI   
4XW  "Initial release"   2016-03-30  RCSB  
4XW  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     4XW
_pdbx_chem_comp_synonyms.name        "9-cis-13,14-dihydroretinoic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
