data_3KW
#

_chem_comp.id                                   3KW
_chem_comp.name                                 "(2E,5R)-5-(2-cyclohexylethyl)-2-imino-3-methyl-5-{[(1S,3R)-3-(quinolin-2-ylamino)cyclohexyl]methyl}imidazolidin-4-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H39 N5 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-09-08
_chem_comp.pdbx_modified_date                   2020-06-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       461.642
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3KW
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4R95
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3KW  C1   C1   C  0  1  N  N  N  21.338  11.738  23.090  -2.410  -0.399   0.966  C1   3KW   1  
3KW  C2   C2   C  0  1  N  N  R  20.903  10.628  22.176  -2.618  -0.113  -0.506  C2   3KW   2  
3KW  N3   N3   N  0  1  N  N  N  21.470   9.448  22.816  -2.771  -1.443  -1.119  N3   3KW   3  
3KW  C4   C4   C  0  1  N  N  N  22.139   9.800  23.951  -2.659  -2.358  -0.102  C4   3KW   4  
3KW  N5   N5   N  0  1  N  N  N  22.105  11.172  24.062  -2.449  -1.738   1.106  N5   3KW   5  
3KW  O6   O6   O  0  1  N  N  N  21.022  12.911  22.966  -2.236   0.417   1.846  O6   3KW   6  
3KW  C7   C7   C  0  1  N  N  N  19.377  10.507  22.126  -3.884   0.720  -0.714  C7   3KW   7  
3KW  C8   C8   C  0  1  N  N  S  22.969  10.979  20.636  -0.130  -0.164  -0.725  C8   3KW   8  
3KW  C9   C9   C  0  1  N  N  N  18.669  10.514  23.492  -5.078   0.000  -0.084  C9   3KW   9  
3KW  C10  C10  C  0  1  N  N  N  17.214  10.046  23.464  -6.344   0.834  -0.292  C10  3KW  10  
3KW  C11  C11  C  0  1  N  N  N  23.443  11.966  19.568   1.097   0.675  -1.090  C11  3KW  11  
3KW  C12  C12  C  0  1  N  N  R  24.976  11.994  19.467   2.368  -0.096  -0.726  C12  3KW  12  
3KW  C13  C13  C  0  1  N  N  N  25.539  10.577  19.311   2.403  -1.416  -1.500  C13  3KW  13  
3KW  C14  C14  C  0  1  N  N  N  25.108   9.723  20.479   1.176  -2.254  -1.135  C14  3KW  14  
3KW  C15  C15  C  0  1  N  N  N  23.589   9.609  20.454  -0.095  -1.483  -1.499  C15  3KW  15  
3KW  C16  C16  C  0  1  N  N  N  16.723   9.838  24.895  -7.557   0.058   0.226  C16  3KW  16  
3KW  C17  C17  C  0  1  N  N  N  15.264   9.373  24.934  -8.823   0.891   0.018  C17  3KW  17  
3KW  C18  C18  C  0  1  N  N  N  14.344  10.350  24.225  -8.696   2.211   0.782  C18  3KW  18  
3KW  C19  C19  C  0  1  N  N  N  14.820  10.583  22.796  -7.484   2.986   0.264  C19  3KW  19  
3KW  C20  C20  C  0  1  N  N  N  16.288  11.026  22.752  -6.218   2.153   0.472  C20  3KW  20  
3KW  N21  N21  N  0  1  N  N  N  22.712   9.023  24.811  -2.742  -3.648  -0.261  N21  3KW  21  
3KW  N22  N22  N  0  1  N  N  N  25.363  12.680  18.242   3.543   0.706  -1.076  N22  3KW  22  
3KW  C23  C23  C  0  1  N  N  N  21.452  10.861  20.759  -1.401   0.607  -1.088  C23  3KW  23  
3KW  C24  C24  C  0  1  N  N  N  22.526  11.909  25.237  -2.289  -2.442   2.380  C24  3KW  24  
3KW  C25  C25  C  0  1  Y  N  N  25.807  14.018  18.356   4.744   0.503  -0.413  C25  3KW  25  
3KW  C26  C26  C  0  1  Y  N  N  25.675  14.734  19.530   4.815  -0.475   0.590  C26  3KW  26  
3KW  C27  C27  C  0  1  Y  N  N  26.112  16.039  19.582   5.989  -0.686   1.249  C27  3KW  27  
3KW  N28  N28  N  0  1  Y  N  N  26.359  14.565  17.263   5.792   1.229  -0.743  N28  3KW  28  
3KW  C29  C29  C  0  1  Y  N  N  26.787  15.834  17.309   6.970   1.066  -0.130  C29  3KW  29  
3KW  C30  C30  C  0  1  Y  N  N  26.671  16.603  18.458   7.105   0.098   0.895  C30  3KW  30  
3KW  C31  C31  C  0  1  Y  N  N  27.100  17.915  18.501   8.344  -0.068   1.533  C31  3KW  31  
3KW  C32  C32  C  0  1  Y  N  N  27.662  18.488  17.379   9.402   0.704   1.160  C32  3KW  32  
3KW  C33  C33  C  0  1  Y  N  N  27.796  17.738  16.226   9.272   1.657   0.152  C33  3KW  33  
3KW  C34  C34  C  0  1  Y  N  N  27.362  16.424  16.199   8.084   1.844  -0.487  C34  3KW  34  
3KW  H1   H1   H  0  1  N  N  N  18.989  11.352  21.538  -3.759   1.696  -0.244  H1   3KW  35  
3KW  H2   H2   H  0  1  N  N  N  19.128   9.563  21.620  -4.061   0.852  -1.781  H2   3KW  36  
3KW  H3   H3   H  0  1  N  N  N  23.332  11.364  21.600  -0.124  -0.370   0.346  H3   3KW  37  
3KW  H4   H4   H  0  1  N  N  N  19.228   9.852  24.170  -5.204  -0.975  -0.554  H4   3KW  38  
3KW  H5   H5   H  0  1  N  N  N  18.690  11.542  23.883  -4.901  -0.131   0.983  H5   3KW  39  
3KW  H6   H6   H  0  1  N  N  N  17.170   9.081  22.938  -6.472   1.040  -1.355  H6   3KW  40  
3KW  H7   H7   H  0  1  N  N  N  23.084  12.973  19.827   1.091   0.881  -2.160  H7   3KW  41  
3KW  H8   H8   H  0  1  N  N  N  23.026  11.667  18.595   1.072   1.615  -0.538  H8   3KW  42  
3KW  H9   H9   H  0  1  N  N  N  25.407  12.481  20.354   2.374  -0.303   0.344  H9   3KW  43  
3KW  H10  H10  H  0  1  N  N  N  25.162  10.135  18.377   2.397  -1.209  -2.570  H10  3KW  44  
3KW  H11  H11  H  0  1  N  N  N  26.638  10.622  19.278   3.308  -1.965  -1.241  H11  3KW  45  
3KW  H12  H12  H  0  1  N  N  N  25.557   8.723  20.394   1.201  -3.194  -1.687  H12  3KW  46  
3KW  H13  H13  H  0  1  N  N  N  25.430  10.191  21.421   1.182  -2.460  -0.065  H13  3KW  47  
3KW  H14  H14  H  0  1  N  N  N  23.270   9.189  19.489  -0.969  -2.080  -1.239  H14  3KW  48  
3KW  H15  H15  H  0  1  N  N  N  23.259   8.948  21.269  -0.101  -1.277  -2.569  H15  3KW  49  
3KW  H16  H16  H  0  1  N  N  N  17.352   9.077  25.380  -7.647  -0.882  -0.319  H16  3KW  50  
3KW  H17  H17  H  0  1  N  N  N  16.809  10.788  25.442  -7.429  -0.149   1.289  H17  3KW  51  
3KW  H18  H18  H  0  1  N  N  N  14.947   9.282  25.983  -8.951   1.098  -1.045  H18  3KW  52  
3KW  H19  H19  H  0  1  N  N  N  15.189   8.392  24.442  -9.686   0.338   0.387  H19  3KW  53  
3KW  H20  H20  H  0  1  N  N  N  14.343  11.307  24.768  -9.598   2.804   0.634  H20  3KW  54  
3KW  H21  H21  H  0  1  N  N  N  13.324   9.939  24.205  -8.568   2.004   1.845  H21  3KW  55  
3KW  H22  H22  H  0  1  N  N  N  14.198  11.365  22.336  -7.612   3.193  -0.799  H22  3KW  56  
3KW  H23  H23  H  0  1  N  N  N  14.713   9.647  22.228  -7.394   3.926   0.808  H23  3KW  57  
3KW  H24  H24  H  0  1  N  N  N  16.601  11.107  21.701  -6.090   1.946   1.535  H24  3KW  58  
3KW  H25  H25  H  0  1  N  N  N  16.375  12.009  23.237  -5.354   2.706   0.102  H25  3KW  59  
3KW  H26  H26  H  0  1  N  N  N  23.125   9.537  25.563  -2.654  -4.238   0.504  H26  3KW  60  
3KW  H28  H28  H  0  1  N  N  N  24.569  12.679  17.634   3.480   1.380  -1.771  H28  3KW  61  
3KW  H29  H29  H  0  1  N  N  N  21.011  11.793  20.377  -1.495   0.662  -2.173  H29  3KW  62  
3KW  H30  H30  H  0  1  N  N  N  21.129  10.018  20.131  -1.344   1.615  -0.677  H30  3KW  63  
3KW  H31  H31  H  0  1  N  N  N  23.133  11.257  25.882  -3.264  -2.570   2.850  H31  3KW  64  
3KW  H32  H32  H  0  1  N  N  N  23.124  12.779  24.929  -1.840  -3.419   2.202  H32  3KW  65  
3KW  H33  H33  H  0  1  N  N  N  21.640  12.251  25.792  -1.643  -1.860   3.038  H33  3KW  66  
3KW  H34  H34  H  0  1  N  N  N  25.232  14.274  20.401   3.942  -1.060   0.838  H34  3KW  67  
3KW  H35  H35  H  0  1  N  N  N  26.017  16.612  20.493   6.061  -1.435   2.024  H35  3KW  68  
3KW  H36  H36  H  0  1  N  N  N  26.996  18.490  19.409   8.457  -0.803   2.315  H36  3KW  69  
3KW  H37  H37  H  0  1  N  N  N  27.995  19.515  17.401  10.355   0.576   1.651  H37  3KW  70  
3KW  H38  H38  H  0  1  N  N  N  28.240  18.178  15.345  10.125   2.257  -0.126  H38  3KW  71  
3KW  H39  H39  H  0  1  N  N  N  27.475  15.848  15.292   7.999   2.588  -1.266  H39  3KW  72  
3KW  H40  H40  H  0  1  N  N  N  21.381   8.513  22.472  -2.921  -1.634  -2.058  H40  3KW  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3KW  C34  C33  DOUB  Y  N   1  
3KW  C34  C29  SING  Y  N   2  
3KW  C33  C32  SING  Y  N   3  
3KW  N28  C29  DOUB  Y  N   4  
3KW  N28  C25  SING  Y  N   5  
3KW  C29  C30  SING  Y  N   6  
3KW  C32  C31  DOUB  Y  N   7  
3KW  N22  C25  SING  N  N   8  
3KW  N22  C12  SING  N  N   9  
3KW  C25  C26  DOUB  Y  N  10  
3KW  C30  C31  SING  Y  N  11  
3KW  C30  C27  DOUB  Y  N  12  
3KW  C13  C12  SING  N  N  13  
3KW  C13  C14  SING  N  N  14  
3KW  C12  C11  SING  N  N  15  
3KW  C26  C27  SING  Y  N  16  
3KW  C11  C8   SING  N  N  17  
3KW  C15  C14  SING  N  N  18  
3KW  C15  C8   SING  N  N  19  
3KW  C8   C23  SING  N  N  20  
3KW  C23  C2   SING  N  N  21  
3KW  C7   C2   SING  N  N  22  
3KW  C7   C9   SING  N  N  23  
3KW  C2   N3   SING  N  N  24  
3KW  C2   C1   SING  N  N  25  
3KW  C20  C19  SING  N  N  26  
3KW  C20  C10  SING  N  N  27  
3KW  C19  C18  SING  N  N  28  
3KW  N3   C4   SING  N  N  29  
3KW  O6   C1   DOUB  N  N  30  
3KW  C1   N5   SING  N  N  31  
3KW  C10  C9   SING  N  N  32  
3KW  C10  C16  SING  N  N  33  
3KW  C4   N5   SING  N  N  34  
3KW  C4   N21  DOUB  N  N  35  
3KW  N5   C24  SING  N  N  36  
3KW  C18  C17  SING  N  N  37  
3KW  C16  C17  SING  N  N  38  
3KW  C7   H1   SING  N  N  39  
3KW  C7   H2   SING  N  N  40  
3KW  C8   H3   SING  N  N  41  
3KW  C9   H4   SING  N  N  42  
3KW  C9   H5   SING  N  N  43  
3KW  C10  H6   SING  N  N  44  
3KW  C11  H7   SING  N  N  45  
3KW  C11  H8   SING  N  N  46  
3KW  C12  H9   SING  N  N  47  
3KW  C13  H10  SING  N  N  48  
3KW  C13  H11  SING  N  N  49  
3KW  C14  H12  SING  N  N  50  
3KW  C14  H13  SING  N  N  51  
3KW  C15  H14  SING  N  N  52  
3KW  C15  H15  SING  N  N  53  
3KW  C16  H16  SING  N  N  54  
3KW  C16  H17  SING  N  N  55  
3KW  C17  H18  SING  N  N  56  
3KW  C17  H19  SING  N  N  57  
3KW  C18  H20  SING  N  N  58  
3KW  C18  H21  SING  N  N  59  
3KW  C19  H22  SING  N  N  60  
3KW  C19  H23  SING  N  N  61  
3KW  C20  H24  SING  N  N  62  
3KW  C20  H25  SING  N  N  63  
3KW  N21  H26  SING  N  N  64  
3KW  N22  H28  SING  N  N  65  
3KW  C23  H29  SING  N  N  66  
3KW  C23  H30  SING  N  N  67  
3KW  C24  H31  SING  N  N  68  
3KW  C24  H32  SING  N  N  69  
3KW  C24  H33  SING  N  N  70  
3KW  C26  H34  SING  N  N  71  
3KW  C27  H35  SING  N  N  72  
3KW  C31  H36  SING  N  N  73  
3KW  C32  H37  SING  N  N  74  
3KW  C33  H38  SING  N  N  75  
3KW  C34  H39  SING  N  N  76  
3KW  N3   H40  SING  N  N  77  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3KW  SMILES            ACDLabs               12.01  "O=C1N(C(=[N@H])NC1(CC4CCCC(Nc2nc3c(cc2)cccc3)C4)CCC5CCCCC5)C"  
3KW  InChI             InChI                 1.03   "InChI=1S/C28H39N5O/c1-33-26(34)28(32-27(33)29,17-16-20-8-3-2-4-9-20)19-21-10-7-12-23(18-21)30-25-15-14-22-11-5-6-13-24(22)31-25/h5-6,11,13-15,20-21,23H,2-4,7-10,12,16-19H2,1H3,(H2,29,32)(H,30,31)/t21-,23+,28+/m0/s1"  
3KW  InChIKey          InChI                 1.03   XBQKWFZOPAEITA-TWLCBMPQSA-N  
3KW  SMILES_CANONICAL  CACTVS                3.385  "CN1C(=N)N[C@](CCC2CCCCC2)(C[C@H]3CCC[C@H](C3)Nc4ccc5ccccc5n4)C1=O"  
3KW  SMILES            CACTVS                3.385  "CN1C(=N)N[C](CCC2CCCCC2)(C[CH]3CCC[CH](C3)Nc4ccc5ccccc5n4)C1=O"  
3KW  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "[H]/N=C/1\N[C@](C(=O)N1C)(CCC2CCCCC2)C[C@H]3CCC[C@H](C3)Nc4ccc5ccccc5n4"  
3KW  SMILES            "OpenEye OEToolkits"  1.7.6  "CN1C(=O)C(NC1=N)(CCC2CCCCC2)CC3CCCC(C3)Nc4ccc5ccccc5n4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3KW  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2E,5R)-5-(2-cyclohexylethyl)-2-imino-3-methyl-5-{[(1S,3R)-3-(quinolin-2-ylamino)cyclohexyl]methyl}imidazolidin-4-one"  
3KW  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(5R)-2-azanylidene-5-(2-cyclohexylethyl)-3-methyl-5-[[(1S,3R)-3-(quinolin-2-ylamino)cyclohexyl]methyl]imidazolidin-4-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3KW  "Create component"    2014-09-08  RCSB  
3KW  "Initial release"     2014-11-05  RCSB  
3KW  "Other modification"  2020-06-27  RCSB  
##
