data_3GW
# 
_chem_comp.id                                    3GW 
_chem_comp.name                                  "5-(5-formylthiophen-2-yl)uridine-5'(2-(acetylamino)-2-deoxy-alpha-D-galactosyl)-diphosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H29 N3 O18 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-01-13 
_chem_comp.pdbx_modified_date                    2013-01-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        717.487 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3GW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3V0N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3GW CBD   CBD   C 0 1 N N N 21.031 8.003  8.486  -9.673  3.601  1.656  CBD   3GW 1  
3GW OAD   OAD   O 0 1 N N N 21.939 8.974  8.934  -10.565 2.826  1.941  OAD   3GW 2  
3GW CBE   CBE   C 0 1 Y N N 21.574 6.557  8.367  -8.484  3.122  1.074  CBE   3GW 3  
3GW SBB   SBB   S 0 1 Y N N 22.720 5.837  9.381  -8.145  1.437  0.703  SBB   3GW 4  
3GW CAP   CAP   C 0 1 Y N N 21.198 5.598  7.419  -7.414  3.900  0.705  CAP   3GW 5  
3GW CAQ   CAQ   C 0 1 Y N N 21.855 4.343  7.583  -6.371  3.212  0.160  CAQ   3GW 6  
3GW CBF   CBF   C 0 1 Y N N 22.771 4.296  8.644  -6.560  1.859  0.068  CBF   3GW 7  
3GW CBG   CBG   C 0 1 N N N 23.500 3.086  9.088  -5.584  0.901  -0.482 CBG   3GW 8  
3GW CAR   CAR   C 0 1 N N N 23.172 1.805  8.610  -5.016  -0.057 0.312  CAR   3GW 9  
3GW CBH   CBH   C 0 1 N N N 24.378 3.124  10.171 -5.200  0.946  -1.902 CBH   3GW 10 
3GW OAE   OAE   O 0 1 N N N 24.738 4.325  10.705 -5.681  1.776  -2.649 OAE   3GW 11 
3GW NAV   NAV   N 0 1 N N N 24.970 2.003  10.622 -4.302  0.046  -2.357 NAV   3GW 12 
3GW CBI   CBI   C 0 1 N N N 24.673 0.815  10.085 -3.775  -0.868 -1.524 CBI   3GW 13 
3GW OAF   OAF   O 0 1 N N N 25.173 -0.183 10.558 -2.969  -1.667 -1.959 OAF   3GW 14 
3GW NBS   NBS   N 0 1 N N N 23.792 0.693  9.083  -4.117  -0.928 -0.227 NBS   3GW 15 
3GW "C1'" "C1'" C 0 1 N N R 23.489 -0.610 8.555  -3.510  -1.952 0.627  "C1'" 3GW 16 
3GW "O4'" "O4'" O 0 1 N N N 22.961 -0.521 7.168  -2.076  -1.968 0.462  "O4'" 3GW 17 
3GW "C2'" "C2'" C 0 1 N N R 22.464 -1.361 9.329  -3.942  -3.369 0.171  "C2'" 3GW 18 
3GW "O2'" "O2'" O 0 1 N N N 22.694 -2.707 9.219  -5.183  -3.743 0.772  "O2'" 3GW 19 
3GW "C3'" "C3'" C 0 1 N N S 21.221 -0.988 8.632  -2.783  -4.248 0.702  "C3'" 3GW 20 
3GW "O3'" "O3'" O 0 1 N N N 20.241 -1.886 8.923  -3.142  -4.849 1.948  "O3'" 3GW 21 
3GW "C4'" "C4'" C 0 1 N N R 21.640 -1.024 7.193  -1.617  -3.259 0.896  "C4'" 3GW 22 
3GW "C5'" "C5'" C 0 1 N N N 20.790 -0.205 6.365  -0.419  -3.696 0.052  "C5'" 3GW 23 
3GW "O5'" "O5'" O 0 1 N N N 20.434 1.099  6.800  0.689   -2.832 0.314  "O5'" 3GW 24 
3GW PBT   PBT   P 0 1 N N N 18.894 1.344  7.269  2.121   -2.999 -0.403 PBT   3GW 25 
3GW OAN   OAN   O 0 1 N N N 18.508 0.163  8.119  2.786   -4.395 0.047  OAN   3GW 26 
3GW OAG   OAG   O 0 1 N N N 18.734 2.645  8.076  1.941   -2.989 -1.872 OAG   3GW 27 
3GW OBA   OBA   O 0 1 N N N 18.071 1.413  5.910  3.082   -1.782 0.028  OBA   3GW 28 
3GW PBU   PBU   P 0 1 N N N 16.507 1.455  5.842  4.418   -1.136 -0.598 PBU   3GW 29 
3GW OAO   OAO   O 0 1 N N N 16.072 2.780  5.422  4.247   -0.969 -2.058 OAO   3GW 30 
3GW OAH   OAH   O 0 1 N N N 15.836 1.222  7.177  5.669   -2.107 -0.312 OAH   3GW 31 
3GW O1    O1    O 0 1 N N N 16.043 0.326  4.880  4.687   0.300  0.079  O1    3GW 32 
3GW C1    C1    C 0 1 N N R 15.039 0.495  3.980  5.739   1.172  -0.338 C1    3GW 33 
3GW O5    O5    O 0 1 N N N 15.616 1.335  2.822  5.260   2.039  -1.368 O5    3GW 34 
3GW C5    C5    C 0 1 N N R 16.652 0.596  2.211  4.146   2.845  -0.980 C5    3GW 35 
3GW C6    C6    C 0 1 N N N 17.411 1.413  1.185  3.703   3.707  -2.165 C6    3GW 36 
3GW O6    O6    O 0 1 N N N 18.217 2.423  1.681  3.214   2.864  -3.210 O6    3GW 37 
3GW C4    C4    C 0 1 N N R 16.127 -0.743 1.672  4.553   3.750  0.185  C4    3GW 38 
3GW O4    O4    O 0 1 N N N 15.129 -0.423 0.749  5.597   4.630  -0.236 O4    3GW 39 
3GW C3    C3    C 0 1 N N R 15.543 -1.611 2.764  5.052   2.882  1.345  C3    3GW 40 
3GW O3    O3    O 0 1 N N N 15.003 -2.845 2.221  5.503   3.721  2.410  O3    3GW 41 
3GW C2    C2    C 0 1 N N R 14.563 -0.872 3.561  6.211   2.009  0.854  C2    3GW 42 
3GW N2    N2    N 0 1 N N N 14.117 -1.637 4.790  6.648   1.121  1.934  N2    3GW 43 
3GW CBC   CBC   C 0 1 N N N 12.694 -1.925 4.953  7.908   0.643  1.946  CBC   3GW 44 
3GW CAA   CAA   C 0 1 N N N 12.184 -2.445 6.208  8.356   -0.270 3.057  CAA   3GW 45 
3GW OAC   OAC   O 0 1 N N N 11.906 -1.709 3.995  8.680   0.947  1.062  OAC   3GW 46 
3GW H1    H1    H 0 1 N N N 20.009 8.250  8.238  -9.795  4.658  1.843  H1    3GW 47 
3GW H4    H4    H 0 1 N N N 20.478 5.790  6.637  -7.400  4.972  0.837  H4    3GW 48 
3GW H5    H5    H 0 1 N N N 21.662 3.496  6.941  -5.466  3.697  -0.175 H5    3GW 49 
3GW H7    H7    H 0 1 N N N 22.411 1.703  7.851  -5.277  -0.122 1.358  H7    3GW 50 
3GW H8    H8    H 0 1 N N N 25.637 2.059  11.365 -4.036  0.060  -3.290 H8    3GW 51 
3GW H9    H9    H 0 1 N N N 24.411 -1.209 8.534  -3.777  -1.787 1.671  H9    3GW 52 
3GW H10   H10   H 0 1 N N N 22.443 -1.022 10.375 -4.006  -3.425 -0.916 H10   3GW 53 
3GW H11   H11   H 0 1 N N N 22.038 -3.182 9.714  -5.495  -4.622 0.517  H11   3GW 54 
3GW H12   H12   H 0 1 N N N 20.929 0.036  8.906  -2.519  -5.014 -0.028 H12   3GW 55 
3GW H13   H13   H 0 1 N N N 20.014 -1.821 9.843  -3.908  -5.437 1.895  H13   3GW 56 
3GW H14   H14   H 0 1 N N N 21.620 -2.065 6.837  -1.337  -3.219 1.949  H14   3GW 57 
3GW H15   H15   H 0 1 N N N 19.852 -0.761 6.221  -0.148  -4.721 0.307  H15   3GW 58 
3GW H16   H16   H 0 1 N N N 21.300 -0.091 5.397  -0.679  -3.642 -1.005 H16   3GW 59 
3GW H17   H17   H 0 1 N N N 18.245 0.465  8.980  2.933   -4.471 0.999  H17   3GW 60 
3GW H18   H18   H 0 1 N N N 15.310 1.980  7.404  5.840   -2.262 0.628  H18   3GW 61 
3GW H19   H19   H 0 1 N N N 14.197 1.046  4.425  6.572   0.580  -0.719 H19   3GW 62 
3GW H20   H20   H 0 1 N N N 17.379 0.340  2.996  3.322   2.202  -0.671 H20   3GW 63 
3GW H21   H21   H 0 1 N N N 16.674 1.873  0.511  2.912   4.385  -1.845 H21   3GW 64 
3GW H22   H22   H 0 1 N N N 18.050 0.724  0.614  4.551   4.285  -2.531 H22   3GW 65 
3GW H23   H23   H 0 1 N N N 18.645 2.870  0.960  2.915   3.344  -3.995 H23   3GW 66 
3GW H24   H24   H 0 1 N N N 16.954 -1.281 1.185  3.693   4.334  0.511  H24   3GW 67 
3GW H25   H25   H 0 1 N N N 14.768 -1.222 0.383  5.352   5.207  -0.972 H25   3GW 68 
3GW H26   H26   H 0 1 N N N 16.373 -1.880 3.433  4.241   2.245  1.699  H26   3GW 69 
3GW H27   H27   H 0 1 N N N 14.643 -3.371 2.926  4.821   4.306  2.766  H27   3GW 70 
3GW H28   H28   H 0 1 N N N 13.671 -0.724 2.935  7.041   2.645  0.546  H28   3GW 71 
3GW H29   H29   H 0 1 N N N 14.781 -1.938 5.474  6.030   0.878  2.641  H29   3GW 72 
3GW H30   H30   H 0 1 N N N 11.096 -2.586 6.132  7.532   -0.429 3.752  H30   3GW 73 
3GW H31   H31   H 0 1 N N N 12.664 -3.410 6.427  8.667   -1.227 2.638  H31   3GW 74 
3GW H32   H32   H 0 1 N N N 12.406 -1.733 7.017  9.195   0.185  3.585  H32   3GW 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3GW O4    C4    SING N N 1  
3GW C6    O6    SING N N 2  
3GW C6    C5    SING N N 3  
3GW C4    C5    SING N N 4  
3GW C4    C3    SING N N 5  
3GW C5    O5    SING N N 6  
3GW O3    C3    SING N N 7  
3GW C3    C2    SING N N 8  
3GW O5    C1    SING N N 9  
3GW C2    C1    SING N N 10 
3GW C2    N2    SING N N 11 
3GW C1    O1    SING N N 12 
3GW OAC   CBC   DOUB N N 13 
3GW N2    CBC   SING N N 14 
3GW O1    PBU   SING N N 15 
3GW CBC   CAA   SING N N 16 
3GW OAO   PBU   DOUB N N 17 
3GW PBU   OBA   SING N N 18 
3GW PBU   OAH   SING N N 19 
3GW OBA   PBT   SING N N 20 
3GW "C5'" "O5'" SING N N 21 
3GW "C5'" "C4'" SING N N 22 
3GW "O5'" PBT   SING N N 23 
3GW "O4'" "C4'" SING N N 24 
3GW "O4'" "C1'" SING N N 25 
3GW "C4'" "C3'" SING N N 26 
3GW PBT   OAG   DOUB N N 27 
3GW PBT   OAN   SING N N 28 
3GW CAP   CAQ   SING Y N 29 
3GW CAP   CBE   DOUB Y N 30 
3GW CAQ   CBF   DOUB Y N 31 
3GW CBE   CBD   SING N N 32 
3GW CBE   SBB   SING Y N 33 
3GW CBD   OAD   DOUB N N 34 
3GW "C1'" NBS   SING N N 35 
3GW "C1'" "C2'" SING N N 36 
3GW CAR   NBS   SING N N 37 
3GW CAR   CBG   DOUB N N 38 
3GW "C3'" "O3'" SING N N 39 
3GW "C3'" "C2'" SING N N 40 
3GW CBF   CBG   SING N N 41 
3GW CBF   SBB   SING Y N 42 
3GW NBS   CBI   SING N N 43 
3GW CBG   CBH   SING N N 44 
3GW "O2'" "C2'" SING N N 45 
3GW CBI   OAF   DOUB N N 46 
3GW CBI   NAV   SING N N 47 
3GW CBH   NAV   SING N N 48 
3GW CBH   OAE   DOUB N N 49 
3GW CBD   H1    SING N N 50 
3GW CAP   H4    SING N N 51 
3GW CAQ   H5    SING N N 52 
3GW CAR   H7    SING N N 53 
3GW NAV   H8    SING N N 54 
3GW "C1'" H9    SING N N 55 
3GW "C2'" H10   SING N N 56 
3GW "O2'" H11   SING N N 57 
3GW "C3'" H12   SING N N 58 
3GW "O3'" H13   SING N N 59 
3GW "C4'" H14   SING N N 60 
3GW "C5'" H15   SING N N 61 
3GW "C5'" H16   SING N N 62 
3GW OAN   H17   SING N N 63 
3GW OAH   H18   SING N N 64 
3GW C1    H19   SING N N 65 
3GW C5    H20   SING N N 66 
3GW C6    H21   SING N N 67 
3GW C6    H22   SING N N 68 
3GW O6    H23   SING N N 69 
3GW C4    H24   SING N N 70 
3GW O4    H25   SING N N 71 
3GW C3    H26   SING N N 72 
3GW O3    H27   SING N N 73 
3GW C2    H28   SING N N 74 
3GW N2    H29   SING N N 75 
3GW CAA   H30   SING N N 76 
3GW CAA   H31   SING N N 77 
3GW CAA   H32   SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3GW SMILES           ACDLabs              12.01 "O=Cc4sc(C=1C(=O)NC(=O)N(C=1)C3OC(COP(=O)(O)OP(=O)(OC2OC(CO)C(O)C(O)C2NC(=O)C)O)C(O)C3O)cc4" 
3GW InChI            InChI                1.03  
;InChI=1S/C22H29N3O18P2S/c1-8(28)23-14-17(31)15(29)11(6-27)41-21(14)42-45(37,38)43-44(35,36)39-7-12-16(30)18(32)20(40-12)25-4-10(19(33)24-22(25)34)13-3-2-9(5-26)46-13/h2-5,11-12,14-18,20-21,27,29-32H,6-7H2,1H3,(H,23,28)(H,35,36)(H,37,38)(H,24,33,34)/t11-,12-,14-,15+,16-,17-,18-,20-,21-/m1/s1
;
3GW InChIKey         InChI                1.03  PRYRELLFERSIJT-DVUHHYPWSA-N 
3GW SMILES_CANONICAL CACTVS               3.370 "CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=C(C(=O)NC3=O)c4sc(C=O)cc4" 
3GW SMILES           CACTVS               3.370 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=C(C(=O)NC3=O)c4sc(C=O)cc4" 
3GW SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=C(C(=O)NC3=O)c4ccc(s4)C=O)O)O)CO)O)O" 
3GW SMILES           "OpenEye OEToolkits" 1.7.6 "CC(=O)NC1C(C(C(OC1OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)N3C=C(C(=O)NC3=O)c4ccc(s4)C=O)O)O)CO)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3GW "SYSTEMATIC NAME" ACDLabs              12.01 
;(2R,3R,4R,5R,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl {(2R,3S,4R,5R)-5-[5-(5-formylthiophen-2-yl)-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl]-3,4-dihydroxytetrahydrofuran-2-yl}methyl dihydrogen diphosphate (non-preferred name)
;
3GW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[(2R,3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl] [[(2R,3S,4R,5R)-5-[5-(5-methanoylthiophen-2-yl)-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3GW "Create component" 2012-01-13 RCSB 
3GW "Initial release"  2013-01-18 RCSB 
# 
