data_0IW
# 
_chem_comp.id                                    0IW 
_chem_comp.name                                  "Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H40 N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         
;APC-3316, bound form; 4-Methylpiperazine-1-carboxylic acid
[1-[(3-benzenesulfonyl-1-phenethylallyl)carbamoyl]-2-phenylethyl]amide, bound form
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-09-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        576.749 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0IW 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1FH0 
_chem_comp.pdbx_subcomponent_list                "ODS PHE NFP" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0IW N1    N1    N 0 1 N N N N N N 52.018 46.941 22.928 4.500  1.492  -0.622 N1  ODS 1  
0IW C     C     C 0 1 N N N N N N 52.270 47.918 23.818 3.434  1.214  0.154  C   ODS 2  
0IW O     O     O 0 1 N N N N N N 51.638 47.954 24.879 3.486  1.412  1.353  O   ODS 3  
0IW C2    C2    C 0 1 N N N N N N 52.887 46.676 21.733 4.500  1.155  -2.053 C2  ODS 4  
0IW C3    C3    C 0 1 N N N N N N 52.107 46.399 20.455 5.779  0.372  -2.369 C3  ODS 5  
0IW N4    N4    N 0 1 N N N N N N 51.119 45.336 20.647 6.945  1.139  -1.911 N4  ODS 6  
0IW CM    CM    C 0 1 N N N N N N 50.379 45.204 19.392 8.196  0.505  -2.347 CM  ODS 7  
0IW C5    C5    C 0 1 N N N N N N 50.153 45.660 21.700 6.926  1.318  -0.453 C5  ODS 8  
0IW C6    C6    C 0 1 N N N N N N 50.829 45.994 23.043 5.692  2.146  -0.060 C6  ODS 9  
0IW N     N     N 0 1 N N N N N N 53.315 48.735 23.637 2.310  0.716  -0.398 N   PHE 10 
0IW CA    CA    C 0 1 N N S N N N 53.580 49.816 24.595 1.113  0.523  0.424  CA  PHE 11 
0IW C1    C1    C 0 1 N N N N N N 52.391 50.769 24.520 0.251  -0.551 -0.188 C   PHE 12 
0IW O1    O1    O 0 1 N N N N N N 51.906 51.070 23.423 0.602  -1.102 -1.210 O   PHE 13 
0IW CB    CB    C 0 1 N N N N N N 54.869 50.609 24.265 0.324  1.832  0.492  CB  PHE 14 
0IW CG    CG    C 0 1 Y N N N N N 56.124 49.771 24.200 1.140  2.873  1.214  CG  PHE 15 
0IW CD1   CD1   C 0 1 Y N N N N N 56.361 48.755 25.124 1.996  3.695  0.505  CD1 PHE 16 
0IW CD2   CD2   C 0 1 Y N N N N N 57.083 50.021 23.224 1.028  3.010  2.585  CD2 PHE 17 
0IW CE1   CE1   C 0 1 Y N N N N N 57.541 48.000 25.069 2.744  4.650  1.168  CE1 PHE 18 
0IW CE2   CE2   C 0 1 Y N N N N N 58.264 49.275 23.161 1.777  3.965  3.248  CE2 PHE 19 
0IW CZ    CZ    C 0 1 Y N N N N N 58.492 48.264 24.085 2.637  4.783  2.539  CZ  PHE 20 
0IW C11   C11   C 0 1 N N N N N N 51.559 53.305 27.904 -3.724 -0.424 -0.342 C1  NFP 21 
0IW C21   C21   C 0 1 N N N N N N 51.232 53.400 26.397 -3.201 -1.740 0.237  C2  NFP 22 
0IW C31   C31   C 0 1 N N S N N N 50.735 52.061 25.757 -1.748 -1.945 -0.194 C3  NFP 23 
0IW N2    N2    N 0 1 N N N N N N 51.791 51.053 25.677 -0.910 -0.901 0.401  N   NFP 24 
0IW C4    C4    C 0 1 N N N N N N 49.501 51.476 26.471 -1.264 -3.318 0.279  C4  NFP 25 
0IW C51   C51   C 0 1 N N N N N N 48.988 50.228 25.721 0.145  -3.575 -0.258 C5  NFP 26 
0IW "C1'" "C1'" C 0 1 Y N N N N N 47.751 49.576 26.318 0.621  -4.927 0.208  C6  NFP 27 
0IW "C2'" "C2'" C 0 1 Y N N N N N 47.884 48.473 27.177 0.374  -6.049 -0.561 C7  NFP 28 
0IW "C3'" "C3'" C 0 1 Y N N N N N 46.752 47.870 27.718 0.811  -7.289 -0.133 C8  NFP 29 
0IW "C4'" "C4'" C 0 1 Y N N N N N 45.483 48.362 27.405 1.495  -7.407 1.062  C9  NFP 30 
0IW "C5'" "C5'" C 0 1 Y N N N N N 45.343 49.456 26.552 1.743  -6.284 1.830  C10 NFP 31 
0IW "C6'" "C6'" C 0 1 Y N N N N N 46.473 50.064 26.009 1.310  -5.044 1.401  C11 NFP 32 
0IW C12   C12   C 0 1 Y N N N N N 50.580 52.558 33.053 -6.635 3.764  -1.707 C12 NFP 33 
0IW C22   C22   C 0 1 Y N N N N N 49.450 53.275 32.690 -6.826 2.583  -2.401 C13 NFP 34 
0IW C32   C32   C 0 1 Y N N N N N 49.279 53.690 31.368 -6.464 1.379  -1.827 C14 NFP 35 
0IW C41   C41   C 0 1 Y N N N N N 50.239 53.380 30.373 -5.910 1.355  -0.561 C15 NFP 36 
0IW S1    S1    S 0 1 N N N N N N 50.228 54.198 28.800 -5.447 -0.181 0.169  S1  NFP 37 
0IW O11   O11   O 0 1 N N N N N N 50.316 55.773 29.058 -6.293 -1.135 -0.457 O1  NFP 38 
0IW O2    O2    O 0 1 N N N N N N 48.804 53.880 28.189 -5.524 0.060  1.568  O2  NFP 39 
0IW C52   C52   C 0 1 Y N N N N N 51.376 52.650 30.776 -5.719 2.535  0.132  C16 NFP 40 
0IW C61   C61   C 0 1 Y N N N N N 51.545 52.248 32.102 -6.082 3.740  -0.441 C17 NFP 41 
0IW H21   H21   H 0 1 N N N N N N 53.514 47.564 21.564 3.629  0.543  -2.286 H21 ODS 42 
0IW H22   H22   H 0 1 N N N N N N 53.507 45.794 21.952 4.476  2.070  -2.645 H22 ODS 43 
0IW H31   H31   H 0 1 N N N N N N 51.584 47.318 20.153 5.752  -0.590 -1.856 H31 ODS 44 
0IW H32   H32   H 0 1 N N N N N N 52.812 46.089 19.670 5.850  0.209  -3.444 H32 ODS 45 
0IW HM1   HM1   H 0 1 N N N N N N 49.623 44.412 19.493 8.217  0.453  -3.435 HM1 ODS 46 
0IW HM2   HM2   H 0 1 N N N N N N 49.882 46.157 19.157 9.044  1.093  -1.995 HM2 ODS 47 
0IW HM3   HM3   H 0 1 N N N N N N 51.076 44.944 18.581 8.257  -0.502 -1.934 HM3 ODS 48 
0IW H51   H51   H 0 1 N N N N N N 49.568 46.534 21.378 6.883  0.343  0.033  H51 ODS 49 
0IW H52   H52   H 0 1 N N N N N N 49.496 44.790 21.848 7.829  1.842  -0.139 H52 ODS 50 
0IW H61   H61   H 0 1 N N N N N N 51.188 45.052 23.484 5.780  3.155  -0.464 H61 ODS 51 
0IW H62   H62   H 0 1 N N N N N N 50.078 46.471 23.690 5.609  2.189  1.026  H62 ODS 52 
0IW H     H     H 0 1 N N N N N N 53.916 48.609 22.848 2.293  0.486  -1.340 H   PHE 53 
0IW HA    HA    H 0 1 N N N N N N 53.719 49.378 25.594 1.407  0.223  1.430  HA  PHE 54 
0IW HB2   HB2   H 0 1 N N N N N N 54.730 51.083 23.282 0.106  2.178  -0.518 HB2 PHE 55 
0IW HB3   HB3   H 0 1 N N N N N N 55.010 51.364 25.052 -0.610 1.666  1.029  HB3 PHE 56 
0IW HD1   HD1   H 0 1 N N N N N N 55.628 48.547 25.890 2.080  3.591  -0.567 HD1 PHE 57 
0IW HD2   HD2   H 0 1 N N N N N N 56.912 50.806 22.502 0.356  2.371  3.139  HD2 PHE 58 
0IW HE1   HE1   H 0 1 N N N N N N 57.713 47.214 25.789 3.414  5.291  0.614  HE1 PHE 59 
0IW HE2   HE2   H 0 1 N N N N N N 58.997 49.485 22.396 1.689  4.072  4.319  HE2 PHE 60 
0IW HZ    HZ    H 0 1 N N N N N N 59.402 47.685 24.041 3.222  5.529  3.057  HZ  PHE 61 
0IW H11   H11   H 0 1 N N N N N N 51.593 52.252 28.221 -3.115 0.402  0.027  H1  NFP 62 
0IW H221  H221  H 0 0 N N N N N N 52.535 53.767 28.112 -3.669 -0.458 -1.430 ?   ?   63 
0IW H211  H211  H 0 0 N N N N N N 50.437 54.150 26.271 -3.256 -1.706 1.325  H3  NFP 64 
0IW H24   H24   H 0 1 N N N N N N 52.149 53.705 25.872 -3.809 -2.566 -0.132 ?   ?   65 
0IW H3    H3    H 0 1 N N N N N N 50.436 52.328 24.733 -1.680 -1.891 -1.281 H5  NFP 66 
0IW HN2   HN2   H 0 1 N N N N N N 52.069 50.567 26.506 -1.191 -0.461 1.218  H6  NFP 67 
0IW H41   H41   H 0 1 N N N N N N 49.778 51.192 27.497 -1.248 -3.342 1.368  H7  NFP 68 
0IW H42   H42   H 0 1 N N N N N N 48.705 52.235 26.497 -1.940 -4.088 -0.092 H8  NFP 69 
0IW H511  H511  H 0 0 N N N N N N 48.739 50.536 24.695 0.129  -3.551 -1.348 H9  NFP 70 
0IW H521  H521  H 0 0 N N N N N N 49.795 49.480 25.729 0.821  -2.804 0.112  H10 NFP 71 
0IW "H2'" "H2'" H 0 1 N N N N N N 48.865 48.092 27.418 -0.160 -5.957 -1.495 H11 NFP 72 
0IW "H3'" "H3'" H 0 1 N N N N N N 46.855 47.022 28.379 0.617  -8.166 -0.733 H12 NFP 73 
0IW "H4'" "H4'" H 0 1 N N N N N N 44.606 47.893 27.826 1.836  -8.375 1.396  H13 NFP 74 
0IW "H5'" "H5'" H 0 1 N N N N N N 44.359 49.832 26.312 2.277  -6.376 2.764  H14 NFP 75 
0IW "H6'" "H6'" H 0 1 N N N N N N 46.365 50.912 25.349 1.507  -4.166 1.999  H15 NFP 76 
0IW H1    H1    H 0 1 N N N N N N 50.711 52.240 34.077 -6.915 4.705  -2.157 H16 NFP 77 
0IW H2    H2    H 0 1 N N N N N N 48.701 53.513 33.431 -7.259 2.602  -3.390 H17 NFP 78 
0IW H33   H33   H 0 1 N N N N N N 48.400 54.257 31.099 -6.613 0.456  -2.369 H18 NFP 79 
0IW H5    H5    H 0 1 N N N N N N 52.130 52.397 30.045 -5.286 2.517  1.122  H19 NFP 80 
0IW H6    H6    H 0 1 N N N N N N 52.427 51.695 32.389 -5.933 4.662  0.101  H20 NFP 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0IW N1    C     SING N N 1  
0IW N1    C2    SING N N 2  
0IW N1    C6    SING N N 3  
0IW C     O     DOUB N N 4  
0IW C     N     SING N N 5  
0IW C2    C3    SING N N 6  
0IW C3    N4    SING N N 7  
0IW N4    CM    SING N N 8  
0IW N4    C5    SING N N 9  
0IW C5    C6    SING N N 10 
0IW N     CA    SING N N 11 
0IW CA    C1    SING N N 12 
0IW CA    CB    SING N N 13 
0IW C1    O1    DOUB N N 14 
0IW C1    N2    SING N N 15 
0IW CB    CG    SING N N 16 
0IW CG    CD1   DOUB Y N 17 
0IW CG    CD2   SING Y N 18 
0IW CD1   CE1   SING Y N 19 
0IW CD2   CE2   DOUB Y N 20 
0IW CE1   CZ    DOUB Y N 21 
0IW CE2   CZ    SING Y N 22 
0IW C11   C21   SING N N 23 
0IW C11   S1    SING N N 24 
0IW C21   C31   SING N N 25 
0IW C31   N2    SING N N 26 
0IW C31   C4    SING N N 27 
0IW C4    C51   SING N N 28 
0IW C51   "C1'" SING N N 29 
0IW "C1'" "C2'" DOUB Y N 30 
0IW "C1'" "C6'" SING Y N 31 
0IW "C2'" "C3'" SING Y N 32 
0IW "C3'" "C4'" DOUB Y N 33 
0IW "C4'" "C5'" SING Y N 34 
0IW "C5'" "C6'" DOUB Y N 35 
0IW C12   C22   DOUB Y N 36 
0IW C12   C61   SING Y N 37 
0IW C22   C32   SING Y N 38 
0IW C32   C41   DOUB Y N 39 
0IW C41   S1    SING N N 40 
0IW C41   C52   SING Y N 41 
0IW S1    O11   DOUB N N 42 
0IW S1    O2    DOUB N N 43 
0IW C52   C61   DOUB Y N 44 
0IW C2    H21   SING N N 45 
0IW C2    H22   SING N N 46 
0IW C3    H31   SING N N 47 
0IW C3    H32   SING N N 48 
0IW CM    HM1   SING N N 49 
0IW CM    HM2   SING N N 50 
0IW CM    HM3   SING N N 51 
0IW C5    H51   SING N N 52 
0IW C5    H52   SING N N 53 
0IW C6    H61   SING N N 54 
0IW C6    H62   SING N N 55 
0IW N     H     SING N N 56 
0IW CA    HA    SING N N 57 
0IW CB    HB2   SING N N 58 
0IW CB    HB3   SING N N 59 
0IW CD1   HD1   SING N N 60 
0IW CD2   HD2   SING N N 61 
0IW CE1   HE1   SING N N 62 
0IW CE2   HE2   SING N N 63 
0IW CZ    HZ    SING N N 64 
0IW C11   H11   SING N N 65 
0IW C11   H221  SING N N 66 
0IW C21   H211  SING N N 67 
0IW C21   H24   SING N N 68 
0IW C31   H3    SING N N 69 
0IW N2    HN2   SING N N 70 
0IW C4    H41   SING N N 71 
0IW C4    H42   SING N N 72 
0IW C51   H511  SING N N 73 
0IW C51   H521  SING N N 74 
0IW "C2'" "H2'" SING N N 75 
0IW "C3'" "H3'" SING N N 76 
0IW "C4'" "H4'" SING N N 77 
0IW "C5'" "H5'" SING N N 78 
0IW "C6'" "H6'" SING N N 79 
0IW C12   H1    SING N N 80 
0IW C22   H2    SING N N 81 
0IW C32   H33   SING N N 82 
0IW C52   H5    SING N N 83 
0IW C61   H6    SING N N 84 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0IW SMILES           ACDLabs              12.01 "O=C(N1CCN(C)CC1)NC(C(=O)NC(CCc2ccccc2)CCS(=O)(=O)c3ccccc3)Cc4ccccc4"                                                                                                                                            
0IW InChI            InChI                1.03  "InChI=1S/C32H40N4O4S/c1-35-20-22-36(23-21-35)32(38)34-30(25-27-13-7-3-8-14-27)31(37)33-28(18-17-26-11-5-2-6-12-26)19-24-41(39,40)29-15-9-4-10-16-29/h2-16,28,30H,17-25H2,1H3,(H,33,37)(H,34,38)/t28-,30-/m0/s1" 
0IW InChIKey         InChI                1.03  VZSXPUDQSLKVIR-JDXGNMNLSA-N                                                                                                                                                                                      
0IW SMILES_CANONICAL CACTVS               3.370 "CN1CCN(CC1)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CCc3ccccc3)CC[S](=O)(=O)c4ccccc4"                                                                                                                                
0IW SMILES           CACTVS               3.370 "CN1CCN(CC1)C(=O)N[CH](Cc2ccccc2)C(=O)N[CH](CCc3ccccc3)CC[S](=O)(=O)c4ccccc4"                                                                                                                                    
0IW SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CN1CCN(CC1)C(=O)NC(Cc2ccccc2)C(=O)NC(CCc3ccccc3)CCS(=O)(=O)c4ccccc4"                                                                                                                                            
0IW SMILES           "OpenEye OEToolkits" 1.7.2 "CN1CCN(CC1)C(=O)NC(Cc2ccccc2)C(=O)NC(CCc3ccccc3)CCS(=O)(=O)c4ccccc4"                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0IW "SYSTEMATIC NAME" ACDLabs              12.01 "Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide"              
0IW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "4-methyl-N-[1-oxidanylidene-3-phenyl-1-[[1-phenyl-5-(phenylsulfonyl)pentan-3-yl]amino]propan-2-yl]piperazine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0IW "Create component"   2008-09-14 RCSB 
0IW "Other modification" 2011-10-03 RCSB 
0IW "Other modification" 2011-10-19 RCSB 
0IW "Modify synonyms"    2020-06-05 PDBE 
0IW "Modify PCM"         2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 0IW "APC-3316, bound form"                                                                                                    ? ? 
2 0IW "4-Methylpiperazine-1-carboxylic acid [1-[(3-benzenesulfonyl-1-phenethylallyl)carbamoyl]-2-phenylethyl]amide, bound form" ? ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0IW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C21 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
