data_VJV
#

_chem_comp.id                                   VJV
_chem_comp.name                                 "(1S)-N-{(1S)-7,7-dihydroxy-1-[4-(2-methylquinolin-6-yl)-1H-imidazol-2-yl]nonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H43 N5 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-17
_chem_comp.pdbx_modified_date                   2021-08-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       533.705
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VJV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7JS8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VJV  O2   O1   O  0  1  N  N  N  76.305  32.400  -2.465    2.905  -1.207   1.327  O2   VJV   1  
VJV  C22  C1   C  0  1  N  N  N  76.362  31.780  -1.406    2.545  -1.866   0.375  C22  VJV   2  
VJV  C23  C2   C  0  1  N  N  S  77.660  31.187  -0.890    3.411  -2.988  -0.135  C23  VJV   3  
VJV  C25  C3   C  0  1  N  N  N  78.766  32.139  -0.480    3.184  -4.379   0.454  C25  VJV   4  
VJV  C30  C4   C  0  1  N  N  N  79.561  31.812   0.786    3.355  -5.585  -0.474  C30  VJV   5  
VJV  C29  C5   C  0  1  N  N  N  78.939  32.441   2.020    1.985  -5.957  -1.051  C29  VJV   6  
VJV  N4   N1   N  0  1  N  N  N  78.800  33.925   1.873    1.040  -6.193   0.047  N4   VJV   7  
VJV  C28  C6   C  0  1  N  N  N  78.219  34.537   3.101   -0.219  -6.761  -0.455  C28  VJV   8  
VJV  C27  C7   C  0  1  N  N  N  77.991  34.265   0.656    0.794  -4.969   0.820  C27  VJV   9  
VJV  C26  C8   C  0  1  N  N  N  78.590  33.656  -0.605    2.089  -4.536   1.515  C26  VJV  10  
VJV  C24  C9   C  0  1  N  N  N  78.953  31.302  -1.698    4.435  -3.587   0.832  C24  VJV  11  
VJV  N3   N2   N  0  1  N  N  N  75.292  31.578  -0.630    1.367  -1.599  -0.223  N3   VJV  12  
VJV  C8   C10  C  0  1  N  N  S  73.984  32.116  -0.967    0.521  -0.511   0.277  C8   VJV  13  
VJV  C7   C11  C  0  1  N  N  N  72.884  31.244  -0.359    0.971   0.812  -0.345  C7   VJV  14  
VJV  C6   C12  C  0  1  N  N  N  71.458  31.620  -0.760    2.385   1.146   0.133  C6   VJV  15  
VJV  C5   C13  C  0  1  N  N  N  70.412  30.705  -0.140    2.835   2.469  -0.490  C5   VJV  16  
VJV  C4   C14  C  0  1  N  N  N  68.979  30.899  -0.636    4.249   2.804  -0.012  C4   VJV  17  
VJV  C3   C15  C  0  1  N  N  N  68.021  29.952   0.094    4.699   4.127  -0.635  C3   VJV  18  
VJV  C2   C16  C  0  1  N  N  N  66.660  29.751  -0.574    6.113   4.461  -0.157  C2   VJV  19  
VJV  O1   O2   O  0  1  N  N  N  66.010  30.985  -0.771    6.119   4.579   1.267  O1   VJV  20  
VJV  O    O3   O  0  1  N  N  N  66.828  29.098  -1.814    7.008   3.420  -0.553  O    VJV  21  
VJV  C1   C17  C  0  1  N  N  N  65.704  28.864   0.222    6.562   5.785  -0.780  C1   VJV  22  
VJV  C    C18  C  0  1  N  N  N  65.474  29.313   1.654    7.977   6.119  -0.302  C    VJV  23  
VJV  C9   C19  C  0  1  Y  N  N  73.871  33.506  -0.417   -0.914  -0.780  -0.094  C9   VJV  24  
VJV  N2   N3   N  0  1  Y  N  N  73.366  34.506  -1.110   -1.373  -1.901  -0.693  N2   VJV  25  
VJV  C21  C20  C  0  1  Y  N  N  73.383  35.575  -0.247   -2.722  -1.754  -0.858  C21  VJV  26  
VJV  C10  C21  C  0  1  Y  N  N  73.907  35.213   0.970   -3.047  -0.536  -0.349  C10  VJV  27  
VJV  N    N4   N  0  1  Y  N  N  74.214  33.889   0.840   -1.914   0.030   0.115  N    VJV  28  
VJV  C11  C22  C  0  1  Y  N  N  74.178  36.000   2.182   -4.404   0.061  -0.306  C11  VJV  29  
VJV  C20  C23  C  0  1  Y  N  N  74.481  35.362   3.358   -4.586   1.316   0.244  C20  VJV  30  
VJV  C19  C24  C  0  1  Y  N  N  74.756  36.088   4.537   -5.872   1.873   0.281  C19  VJV  31  
VJV  C14  C25  C  0  1  Y  N  N  74.725  37.496   4.485   -6.969   1.146  -0.246  C14  VJV  32  
VJV  C13  C26  C  0  1  Y  N  N  74.412  38.128   3.261   -6.749  -0.129  -0.799  C13  VJV  33  
VJV  C12  C27  C  0  1  Y  N  N  74.144  37.395   2.145   -5.495  -0.651  -0.831  C12  VJV  34  
VJV  C18  C28  C  0  1  Y  N  N  75.045  35.487   5.779   -6.100   3.149   0.832  C18  VJV  35  
VJV  C17  C29  C  0  1  Y  N  N  75.283  36.267   6.868   -7.378   3.631   0.834  C17  VJV  36  
VJV  C15  C30  C  0  1  Y  N  N  75.241  37.667   6.746   -8.411   2.864   0.300  C15  VJV  37  
VJV  N1   N5   N  0  1  Y  N  N  74.967  38.267   5.594   -8.195   1.677  -0.212  N1   VJV  38  
VJV  C16  C31  C  0  1  N  N  N  75.542  38.553   7.917   -9.814   3.413   0.312  C16  VJV  39  
VJV  H1   H1   H  0  1  N  N  N  77.561  30.277  -0.280    3.688  -2.927  -1.188  H1   VJV  40  
VJV  H2   H2   H  0  1  N  N  N  79.588  30.720   0.918    4.036  -5.329  -1.286  H2   VJV  41  
VJV  H3   H3   H  0  1  N  N  N  80.587  32.193   0.671    3.755  -6.428   0.090  H3   VJV  42  
VJV  H4   H4   H  0  1  N  N  N  77.943  32.003   2.180    1.620  -5.141  -1.676  H4   VJV  43  
VJV  H5   H5   H  0  1  N  N  N  79.577  32.227   2.890    2.077  -6.861  -1.653  H5   VJV  44  
VJV  H7   H7   H  0  1  N  N  N  78.835  34.268   3.972   -0.017  -7.709  -0.952  H7   VJV  45  
VJV  H8   H8   H  0  1  N  N  N  78.198  35.631   2.990   -0.901  -6.926   0.380  H8   VJV  46  
VJV  H9   H9   H  0  1  N  N  N  77.195  34.163   3.247   -0.673  -6.068  -1.163  H9   VJV  47  
VJV  H10  H10  H  0  1  N  N  N  77.959  35.359   0.543    0.458  -4.177   0.150  H10  VJV  48  
VJV  H11  H11  H  0  1  N  N  N  76.969  33.880   0.788    0.026  -5.161   1.569  H11  VJV  49  
VJV  H12  H12  H  0  1  N  N  N  79.573  34.114  -0.788    2.387  -5.294   2.239  H12  VJV  50  
VJV  H13  H13  H  0  1  N  N  N  77.923  33.868  -1.454    1.932  -3.584   2.022  H13  VJV  51  
VJV  H14  H14  H  0  1  N  N  N  79.680  30.477  -1.691    5.386  -3.920   0.417  H14  VJV  52  
VJV  H15  H15  H  0  1  N  N  N  78.939  31.770  -2.693    4.481  -3.170   1.838  H15  VJV  53  
VJV  H16  H16  H  0  1  N  N  N  75.394  31.041   0.207    1.079  -2.126  -0.984  H16  VJV  54  
VJV  H17  H17  H  0  1  N  N  N  73.857  32.143  -2.059    0.611  -0.451   1.362  H17  VJV  55  
VJV  H18  H18  H  0  1  N  N  N  73.062  30.205  -0.672    0.966   0.722  -1.432  H18  VJV  56  
VJV  H19  H19  H  0  1  N  N  N  72.959  31.316   0.736    0.288   1.606  -0.043  H19  VJV  57  
VJV  H20  H20  H  0  1  N  N  N  71.261  32.652  -0.433    2.390   1.236   1.219  H20  VJV  58  
VJV  H21  H21  H  0  1  N  N  N  71.373  31.560  -1.855    3.068   0.352  -0.169  H21  VJV  59  
VJV  H22  H22  H  0  1  N  N  N  70.705  29.666  -0.352    2.830   2.380  -1.577  H22  VJV  60  
VJV  H23  H23  H  0  1  N  N  N  70.418  30.873   0.947    2.152   3.263  -0.188  H23  VJV  61  
VJV  H24  H24  H  0  1  N  N  N  68.670  31.938  -0.451    4.254   2.893   1.074  H24  VJV  62  
VJV  H25  H25  H  0  1  N  N  N  68.939  30.691  -1.716    4.932   2.010  -0.314  H25  VJV  63  
VJV  H26  H26  H  0  1  N  N  N  68.509  28.969   0.172    4.694   4.037  -1.721  H26  VJV  64  
VJV  H27  H27  H  0  1  N  N  N  67.848  30.356   1.102    4.016   4.921  -0.333  H27  VJV  65  
VJV  H28  H28  H  0  1  N  N  N  65.899  31.422   0.065    5.532   5.268   1.608  H28  VJV  66  
VJV  H29  H29  H  0  1  N  N  N  67.267  28.266  -1.678    7.055   3.284  -1.509  H29  VJV  67  
VJV  H30  H30  H  0  1  N  N  N  64.733  28.854  -0.295    6.558   5.695  -1.866  H30  VJV  68  
VJV  H31  H31  H  0  1  N  N  N  66.118  27.845   0.244    5.880   6.579  -0.478  H31  VJV  69  
VJV  H32  H32  H  0  1  N  N  N  64.777  28.620   2.149    7.982   6.208   0.785  H32  VJV  70  
VJV  H33  H33  H  0  1  N  N  N  66.432  29.318   2.195    8.660   5.325  -0.604  H33  VJV  71  
VJV  H34  H34  H  0  1  N  N  N  65.047  30.327   1.656    8.297   7.062  -0.745  H34  VJV  72  
VJV  H35  H35  H  0  1  N  N  N  73.042  34.491  -2.056   -0.843  -2.668  -0.958  H35  VJV  73  
VJV  H36  H36  H  0  1  N  N  N  73.032  36.566  -0.492   -3.399  -2.467  -1.305  H36  VJV  74  
VJV  H38  H38  H  0  1  N  N  N  74.510  34.283   3.382   -3.744   1.863   0.644  H38  VJV  75  
VJV  H39  H39  H  0  1  N  N  N  74.385  39.206   3.210   -7.578  -0.692  -1.203  H39  VJV  76  
VJV  H40  H40  H  0  1  N  N  N  73.902  37.899   1.221   -5.336  -1.628  -1.261  H40  VJV  77  
VJV  H41  H41  H  0  1  N  N  N  75.077  34.411   5.866   -5.287   3.730   1.242  H41  VJV  78  
VJV  H42  H42  H  0  1  N  N  N  75.503  35.812   7.823   -7.588   4.606   1.250  H42  VJV  79  
VJV  H43  H43  H  0  1  N  N  N  75.481  39.606   7.606   -9.993   3.973  -0.606  H43  VJV  80  
VJV  H44  H44  H  0  1  N  N  N  74.811  38.364   8.717  -10.526   2.590   0.381  H44  VJV  81  
VJV  H45  H45  H  0  1  N  N  N  76.555  38.338   8.288   -9.938   4.074   1.170  H45  VJV  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VJV  O2   C22  DOUB  N  N   1  
VJV  O    C2   SING  N  N   2  
VJV  C24  C23  SING  N  N   3  
VJV  C24  C25  SING  N  N   4  
VJV  C22  C23  SING  N  N   5  
VJV  C22  N3   SING  N  N   6  
VJV  N2   C9   SING  Y  N   7  
VJV  N2   C21  SING  Y  N   8  
VJV  C8   N3   SING  N  N   9  
VJV  C8   C9   SING  N  N  10  
VJV  C8   C7   SING  N  N  11  
VJV  C23  C25  SING  N  N  12  
VJV  O1   C2   SING  N  N  13  
VJV  C6   C7   SING  N  N  14  
VJV  C6   C5   SING  N  N  15  
VJV  C4   C5   SING  N  N  16  
VJV  C4   C3   SING  N  N  17  
VJV  C26  C25  SING  N  N  18  
VJV  C26  C27  SING  N  N  19  
VJV  C2   C3   SING  N  N  20  
VJV  C2   C1   SING  N  N  21  
VJV  C25  C30  SING  N  N  22  
VJV  C9   N    DOUB  Y  N  23  
VJV  C21  C10  DOUB  Y  N  24  
VJV  C1   C    SING  N  N  25  
VJV  C27  N4   SING  N  N  26  
VJV  C30  C29  SING  N  N  27  
VJV  N    C10  SING  Y  N  28  
VJV  C10  C11  SING  N  N  29  
VJV  N4   C29  SING  N  N  30  
VJV  N4   C28  SING  N  N  31  
VJV  C12  C11  DOUB  Y  N  32  
VJV  C12  C13  SING  Y  N  33  
VJV  C11  C20  SING  Y  N  34  
VJV  C13  C14  DOUB  Y  N  35  
VJV  C20  C19  DOUB  Y  N  36  
VJV  C14  C19  SING  Y  N  37  
VJV  C14  N1   SING  Y  N  38  
VJV  C19  C18  SING  Y  N  39  
VJV  N1   C15  DOUB  Y  N  40  
VJV  C18  C17  DOUB  Y  N  41  
VJV  C15  C17  SING  Y  N  42  
VJV  C15  C16  SING  N  N  43  
VJV  C23  H1   SING  N  N  44  
VJV  C30  H2   SING  N  N  45  
VJV  C30  H3   SING  N  N  46  
VJV  C29  H4   SING  N  N  47  
VJV  C29  H5   SING  N  N  48  
VJV  C28  H7   SING  N  N  49  
VJV  C28  H8   SING  N  N  50  
VJV  C28  H9   SING  N  N  51  
VJV  C27  H10  SING  N  N  52  
VJV  C27  H11  SING  N  N  53  
VJV  C26  H12  SING  N  N  54  
VJV  C26  H13  SING  N  N  55  
VJV  C24  H14  SING  N  N  56  
VJV  C24  H15  SING  N  N  57  
VJV  N3   H16  SING  N  N  58  
VJV  C8   H17  SING  N  N  59  
VJV  C7   H18  SING  N  N  60  
VJV  C7   H19  SING  N  N  61  
VJV  C6   H20  SING  N  N  62  
VJV  C6   H21  SING  N  N  63  
VJV  C5   H22  SING  N  N  64  
VJV  C5   H23  SING  N  N  65  
VJV  C4   H24  SING  N  N  66  
VJV  C4   H25  SING  N  N  67  
VJV  C3   H26  SING  N  N  68  
VJV  C3   H27  SING  N  N  69  
VJV  O1   H28  SING  N  N  70  
VJV  O    H29  SING  N  N  71  
VJV  C1   H30  SING  N  N  72  
VJV  C1   H31  SING  N  N  73  
VJV  C    H32  SING  N  N  74  
VJV  C    H33  SING  N  N  75  
VJV  C    H34  SING  N  N  76  
VJV  N2   H35  SING  N  N  77  
VJV  C21  H36  SING  N  N  78  
VJV  C20  H38  SING  N  N  79  
VJV  C13  H39  SING  N  N  80  
VJV  C12  H40  SING  N  N  81  
VJV  C18  H41  SING  N  N  82  
VJV  C17  H42  SING  N  N  83  
VJV  C16  H43  SING  N  N  84  
VJV  C16  H44  SING  N  N  85  
VJV  C16  H45  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VJV  SMILES            ACDLabs               12.01  "O=C(C2C1(CCN(C)CC1)C2)NC(c3nc(cn3)c5cc4ccc(C)nc4cc5)CCCCCC(CC)(O)O"  
VJV  InChI             InChI                 1.03   "InChI=1S/C31H43N5O3/c1-4-31(38,39)13-7-5-6-8-26(35-29(37)24-19-30(24)14-16-36(3)17-15-30)28-32-20-27(34-28)23-11-12-25-22(18-23)10-9-21(2)33-25/h9-12,18,20,24,26,38-39H,4-8,13-17,19H2,1-3H3,(H,32,34)(H,35,37)/t24-,26+/m1/s1"  
VJV  InChIKey          InChI                 1.03   TUQSZAQBKOXAIB-RSXGOPAZSA-N  
VJV  SMILES_CANONICAL  CACTVS                3.385  "CCC(O)(O)CCCCC[C@H](NC(=O)[C@H]1CC12CCN(C)CC2)c3[nH]cc(n3)c4ccc5nc(C)ccc5c4"  
VJV  SMILES            CACTVS                3.385  "CCC(O)(O)CCCCC[CH](NC(=O)[CH]1CC12CCN(C)CC2)c3[nH]cc(n3)c4ccc5nc(C)ccc5c4"  
VJV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCC(CCCCC[C@@H](c1[nH]cc(n1)c2ccc3c(c2)ccc(n3)C)NC(=O)[C@H]4CC45CCN(CC5)C)(O)O"  
VJV  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC(CCCCCC(c1[nH]cc(n1)c2ccc3c(c2)ccc(n3)C)NC(=O)C4CC45CCN(CC5)C)(O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VJV  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S)-N-{(1S)-7,7-dihydroxy-1-[4-(2-methylquinolin-6-yl)-1H-imidazol-2-yl]nonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide"  
VJV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-6-methyl-~{N}-[(1~{S})-1-[4-(2-methylquinolin-6-yl)-1~{H}-imidazol-2-yl]-7,7-bis(oxidanyl)nonyl]-6-azaspiro[2.5]octane-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VJV  "Create component"  2020-08-17  RCSB  
VJV  "Initial release"   2021-08-11  RCSB  
##
