data_U4V
#

_chem_comp.id                                   U4V
_chem_comp.name                                 "3'-deoxy-3'-(4-{[(4-sulfamoylphenyl)amino]methyl}-1H-1,2,3-triazol-1-yl)thymidine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H23 N7 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-21
_chem_comp.pdbx_modified_date                   2021-02-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       477.494
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    U4V
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6WKA
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U4V  C19  C1   C  0  1  Y  N  N  -1.981   3.216  85.740  -6.811   0.582  -0.047  C19  U4V   1  
U4V  C18  C2   C  0  1  Y  N  N  -0.652   3.119  85.467  -6.205  -0.319   0.809  C18  U4V   2  
U4V  C17  C3   C  0  1  Y  N  N  -0.024   4.189  84.770  -4.901  -0.716   0.585  C17  U4V   3  
U4V  C16  C4   C  0  1  Y  N  N  -0.744   5.277  84.414  -4.199  -0.209  -0.502  C16  U4V   4  
U4V  C13  C5   C  0  1  Y  N  N  -1.436   7.978  82.772  -0.832  -1.836  -0.300  C13  U4V   5  
U4V  C14  C6   C  0  1  N  N  N  -0.266   7.657  83.830  -2.238  -1.568   0.170  C14  U4V   6  
U4V  O01  O1   O  0  1  N  N  N  -6.974  14.388  76.965   8.121   3.111  -0.968  O01  U4V   7  
U4V  C02  C7   C  0  1  N  N  N  -6.091  13.706  77.278   7.196   2.445  -0.538  C02  U4V   8  
U4V  C03  C8   C  0  1  N  N  N  -6.311  12.311  77.648   6.474   2.877   0.601  C03  U4V   9  
U4V  C04  C9   C  0  1  N  N  N  -7.839  12.059  77.623   6.839   4.165   1.293  C04  U4V  10  
U4V  C05  C10  C  0  1  N  N  N  -5.160  11.446  78.062   5.453   2.120   1.057  C05  U4V  11  
U4V  N06  N1   N  0  1  N  N  N  -3.806  11.972  78.018   5.135   0.954   0.416  N06  U4V  12  
U4V  C07  C11  C  0  1  N  N  R  -2.613  11.268  78.487   4.027   0.133   0.911  C07  U4V  13  
U4V  C08  C12  C  0  1  N  N  N  -2.441  10.972  79.784   2.898   0.089  -0.137  C08  U4V  14  
U4V  C09  C13  C  0  1  N  N  S  -3.077   9.513  79.963   2.730  -1.418  -0.450  C09  U4V  15  
U4V  N10  N2   N  0  1  Y  N  N  -2.621   8.798  81.134   1.314  -1.772  -0.573  N10  U4V  16  
U4V  N11  N3   N  0  1  Y  N  N  -3.445   7.899  81.821   0.826  -2.669  -1.356  N11  U4V  17  
U4V  N12  N4   N  0  1  Y  N  N  -2.688   7.416  82.806  -0.452  -2.728  -1.222  N12  U4V  18  
U4V  N15  N5   N  0  1  N  N  N   0.076   6.331  83.692  -2.883  -0.614  -0.735  N15  U4V  19  
U4V  S20  S1   S  0  1  N  N  N  -2.717   1.802  86.614  -8.474   1.087   0.243  S20  U4V  20  
U4V  O21  O2   O  0  1  N  N  N  -4.160   1.962  86.509  -9.078   0.055   1.012  O21  U4V  21  
U4V  N22  N6   N  0  1  N  N  N  -2.122   0.428  85.879  -8.418   2.424   1.218  N22  U4V  22  
U4V  O23  O3   O  0  1  N  N  N  -2.245   1.958  87.972  -8.985   1.523  -1.009  O23  U4V  23  
U4V  C24  C14  C  0  1  Y  N  N  -2.775   4.298  85.367  -6.114   1.093  -1.126  C24  U4V  24  
U4V  C25  C15  C  0  1  Y  N  N  -2.125   5.370  84.710  -4.812   0.696  -1.359  C25  U4V  25  
U4V  C26  C16  C  0  1  Y  N  N  -1.401   8.862  81.674   0.295  -1.217   0.123  C26  U4V  26  
U4V  C27  C17  C  0  1  N  N  S  -2.675   8.856  78.901   3.361  -2.082   0.801  C27  U4V  27  
U4V  C28  C18  C  0  1  N  N  N  -3.725   7.716  78.508   3.847  -3.495   0.473  C28  U4V  28  
U4V  O29  O4   O  0  1  N  N  N  -4.864   8.411  77.983   4.316  -4.126   1.667  O29  U4V  29  
U4V  O30  O5   O  0  1  N  N  N  -2.662   9.923  77.749   4.473  -1.218   1.116  O30  U4V  30  
U4V  C31  C19  C  0  1  N  N  N  -3.677  13.396  77.692   5.829   0.554  -0.665  C31  U4V  31  
U4V  N32  N7   N  0  1  N  N  N  -4.806  14.210  77.301   6.847   1.292  -1.144  N32  U4V  32  
U4V  O33  O6   O  0  1  N  N  N  -2.656  13.897  77.667   5.529  -0.485  -1.219  O33  U4V  33  
U4V  H1   H1   H  0  1  N  N  N  -0.087   2.251  85.772  -6.751  -0.713   1.653  H1   U4V  34  
U4V  H2   H2   H  0  1  N  N  N   1.026   4.132  84.526  -4.427  -1.420   1.253  H2   U4V  35  
U4V  H3   H3   H  0  1  N  N  N   0.608   8.292  83.625  -2.803  -2.501   0.177  H3   U4V  36  
U4V  H4   H4   H  0  1  N  N  N  -0.624   7.846  84.853  -2.212  -1.153   1.178  H4   U4V  37  
U4V  H5   H5   H  0  1  N  N  N  -8.043  11.014  77.898   7.681   4.628   0.779  H5   U4V  38  
U4V  H6   H6   H  0  1  N  N  N  -8.333  12.730  78.341   5.985   4.842   1.274  H6   U4V  39  
U4V  H7   H7   H  0  1  N  N  N  -8.226  12.255  76.612   7.114   3.956   2.327  H7   U4V  40  
U4V  H8   H8   H  0  1  N  N  N  -5.336  10.433  78.393   4.891   2.434   1.924  H8   U4V  41  
U4V  H9   H9   H  0  1  N  N  N  -1.732  11.809  78.112   3.648   0.546   1.846  H9   U4V  42  
U4V  H10  H10  H  0  1  N  N  N  -1.371  10.962  80.040   1.977   0.497   0.277  H10  U4V  43  
U4V  H11  H11  H  0  1  N  N  N  -2.963  11.702  80.420   3.189   0.635  -1.034  H11  U4V  44  
U4V  H12  H12  H  0  1  N  N  N  -4.171   9.622  79.992   3.277  -1.691  -1.353  H12  U4V  45  
U4V  H13  H13  H  0  1  N  N  N   0.032   6.118  82.716  -2.395  -0.262  -1.496  H13  U4V  46  
U4V  H14  H14  H  0  1  N  N  N  -2.501  -0.381  86.328  -9.113   3.099   1.156  H14  U4V  47  
U4V  H15  H15  H  0  1  N  N  N  -2.383   0.427  84.914  -7.691   2.533   1.850  H15  U4V  48  
U4V  H16  H16  H  0  1  N  N  N  -3.836   4.318  85.569  -6.589   1.801  -1.789  H16  U4V  49  
U4V  H17  H17  H  0  1  N  N  N  -2.680   6.255  84.436  -4.269   1.092  -2.205  H17  U4V  50  
U4V  H18  H18  H  0  1  N  N  N  -0.567   9.462  81.341   0.366  -0.434   0.864  H18  U4V  51  
U4V  H19  H19  H  0  1  N  N  N  -1.675   8.410  79.006   2.647  -2.104   1.624  H19  U4V  52  
U4V  H20  H20  H  0  1  N  N  N  -4.007   7.130  79.395   3.024  -4.075   0.055  H20  U4V  53  
U4V  H21  H21  H  0  1  N  N  N  -3.299   7.046  77.747   4.659  -3.441  -0.252  H21  U4V  54  
U4V  H22  H22  H  0  1  N  N  N  -5.530   7.783  77.729   4.640  -5.027   1.534  H22  U4V  55  
U4V  H23  H23  H  0  1  N  N  N  -4.652  15.163  77.040   7.335   0.992  -1.927  H23  U4V  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U4V  O01  C02  DOUB  N  N   1  
U4V  C02  N32  SING  N  N   2  
U4V  C02  C03  SING  N  N   3  
U4V  N32  C31  SING  N  N   4  
U4V  C04  C03  SING  N  N   5  
U4V  C03  C05  DOUB  N  N   6  
U4V  O33  C31  DOUB  N  N   7  
U4V  C31  N06  SING  N  N   8  
U4V  O30  C07  SING  N  N   9  
U4V  O30  C27  SING  N  N  10  
U4V  O29  C28  SING  N  N  11  
U4V  N06  C05  SING  N  N  12  
U4V  N06  C07  SING  N  N  13  
U4V  C07  C08  SING  N  N  14  
U4V  C28  C27  SING  N  N  15  
U4V  C27  C09  SING  N  N  16  
U4V  C08  C09  SING  N  N  17  
U4V  C09  N10  SING  N  N  18  
U4V  N10  C26  SING  Y  N  19  
U4V  N10  N11  SING  Y  N  20  
U4V  C26  C13  DOUB  Y  N  21  
U4V  N11  N12  DOUB  Y  N  22  
U4V  C13  N12  SING  Y  N  23  
U4V  C13  C14  SING  N  N  24  
U4V  N15  C14  SING  N  N  25  
U4V  N15  C16  SING  N  N  26  
U4V  C16  C25  DOUB  Y  N  27  
U4V  C16  C17  SING  Y  N  28  
U4V  C25  C24  SING  Y  N  29  
U4V  C17  C18  DOUB  Y  N  30  
U4V  C24  C19  DOUB  Y  N  31  
U4V  C18  C19  SING  Y  N  32  
U4V  C19  S20  SING  N  N  33  
U4V  N22  S20  SING  N  N  34  
U4V  O21  S20  DOUB  N  N  35  
U4V  S20  O23  DOUB  N  N  36  
U4V  C18  H1   SING  N  N  37  
U4V  C17  H2   SING  N  N  38  
U4V  C14  H3   SING  N  N  39  
U4V  C14  H4   SING  N  N  40  
U4V  C04  H5   SING  N  N  41  
U4V  C04  H6   SING  N  N  42  
U4V  C04  H7   SING  N  N  43  
U4V  C05  H8   SING  N  N  44  
U4V  C07  H9   SING  N  N  45  
U4V  C08  H10  SING  N  N  46  
U4V  C08  H11  SING  N  N  47  
U4V  C09  H12  SING  N  N  48  
U4V  N15  H13  SING  N  N  49  
U4V  N22  H14  SING  N  N  50  
U4V  N22  H15  SING  N  N  51  
U4V  C24  H16  SING  N  N  52  
U4V  C25  H17  SING  N  N  53  
U4V  C26  H18  SING  N  N  54  
U4V  C27  H19  SING  N  N  55  
U4V  C28  H20  SING  N  N  56  
U4V  C28  H21  SING  N  N  57  
U4V  O29  H22  SING  N  N  58  
U4V  N32  H23  SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U4V  SMILES            ACDLabs               12.01  "c1(S(=O)(=O)N)ccc(cc1)NCc4nnn(C3CC(N2C=C(C(=O)NC2=O)C)OC3CO)c4"  
U4V  InChI             InChI                 1.03   "InChI=1S/C19H23N7O6S/c1-11-8-25(19(29)22-18(11)28)17-6-15(16(10-27)32-17)26-9-13(23-24-26)7-21-12-2-4-14(5-3-12)33(20,30)31/h2-5,8-9,15-17,21,27H,6-7,10H2,1H3,(H2,20,30,31)(H,22,28,29)/t15-,16+,17+/m0/s1"  
U4V  InChIKey          InChI                 1.03   JHJCKCYGIJXIQG-GVDBMIGSSA-N  
U4V  SMILES_CANONICAL  CACTVS                3.385  "CC1=CN([C@H]2C[C@@H]([C@@H](CO)O2)n3cc(CNc4ccc(cc4)[S](N)(=O)=O)nn3)C(=O)NC1=O"  
U4V  SMILES            CACTVS                3.385  "CC1=CN([CH]2C[CH]([CH](CO)O2)n3cc(CNc4ccc(cc4)[S](N)(=O)=O)nn3)C(=O)NC1=O"  
U4V  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)n3cc(nn3)CNc4ccc(cc4)S(=O)(=O)N"  
U4V  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)n3cc(nn3)CNc4ccc(cc4)S(=O)(=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
U4V  "SYSTEMATIC NAME"  ACDLabs               12.01  "3'-deoxy-3'-(4-{[(4-sulfamoylphenyl)amino]methyl}-1H-1,2,3-triazol-1-yl)thymidine"  
U4V  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-[[1-[(2~{S},3~{S},5~{R})-2-(hydroxymethyl)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]oxolan-3-yl]-1,2,3-triazol-4-yl]methylamino]benzenesulfonamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U4V  "Create component"  2020-04-21  RCSB  
U4V  "Initial release"   2021-02-24  RCSB  
##
