data_T6V
# 
_chem_comp.id                                    T6V 
_chem_comp.name                                  "N-[(3S)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]-N-phenylacetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H13 N O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-03-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        251.302 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T6V 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5RFG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T6V C10  C1  C 0 1 Y N N N N N 8.582  -4.255 25.000 -1.857 2.050  -1.157 C10  T6V 1  
T6V C13  C2  C 0 1 N N N N N N 5.165  -6.916 21.960 1.698  -1.644 -0.123 C13  T6V 2  
T6V C02  C3  C 0 1 N N N N N N 6.767  -4.319 20.705 -1.210 -2.240 -0.199 C02  T6V 3  
T6V C03  C4  C 0 1 N N N N N N 8.187  -4.026 20.284 -0.555 -3.576 0.039  C03  T6V 4  
T6V C06  C5  C 0 1 Y N N N N N 7.616  -4.988 22.919 -1.291 0.113  0.139  C06  T6V 5  
T6V C07  C6  C 0 1 Y N N N N N 8.607  -5.963 22.825 -2.020 0.618  1.207  C07  T6V 6  
T6V C08  C7  C 0 1 Y N N N N N 9.584  -6.053 23.803 -2.672 1.829  1.086  C08  T6V 7  
T6V C09  C8  C 0 1 Y N N N N N 9.572  -5.203 24.887 -2.587 2.547  -0.093 C09  T6V 8  
T6V C11  C9  C 0 1 Y N N N N N 7.604  -4.141 24.025 -1.211 0.834  -1.045 C11  T6V 9  
T6V C12  C10 C 0 1 N N S N N N 5.253  -5.434 22.271 0.695  -1.174 0.883  C12  T6V 10 
T6V C14  C11 C 0 1 N N N N N N 4.143  -7.490 22.569 2.478  -0.772 -0.698 C14  T6V 11 
T6V C18  C12 C 0 1 N N N N N N 4.899  -5.319 23.766 1.087  0.235  1.396  C18  T6V 12 
T6V N05  N1  N 0 1 N N N N N N 6.568  -4.899 21.935 -0.629 -1.114 0.259  N05  T6V 13 
T6V O01  O1  O 0 1 N N N N N N 5.832  -4.054 19.959 -2.260 -2.179 -0.803 O01  T6V 14 
T6V O16  O2  O 0 1 N N N N N N 4.443  -7.530 25.170 1.243  1.442  -1.029 O16  T6V 15 
T6V O17  O3  O 0 1 N N N N N N 2.494  -6.343 24.254 3.298  1.402  0.368  O17  T6V 16 
T6V S15  S1  S 0 1 N N N N N N 3.872  -6.731 24.118 2.065  0.829  -0.045 S15  T6V 17 
T6V H101 H1  H 0 0 N N N N N N 8.567  -3.595 25.855 -1.796 2.610  -2.078 H101 T6V 18 
T6V H131 H2  H 0 0 N N N N N N 5.856  -7.440 21.317 1.777  -2.693 -0.366 H131 T6V 19 
T6V H031 H3  H 0 0 N N N N N N 8.187  -3.577 19.280 0.337  -3.440 0.651  H031 T6V 20 
T6V H032 H4  H 0 0 N N N N N N 8.644  -3.326 20.999 -1.252 -4.236 0.555  H032 T6V 21 
T6V H1   H5  H 0 1 N N N N N N 8.765  -4.962 20.267 -0.275 -4.019 -0.916 H1   T6V 22 
T6V H071 H6  H 0 0 N N N N N N 8.613  -6.648 21.990 -2.084 0.060  2.130  H071 T6V 23 
T6V H081 H7  H 0 0 N N N N N N 10.362 -6.796 23.715 -3.240 2.222  1.916  H081 T6V 24 
T6V H091 H8  H 0 0 N N N N N N 10.337 -5.281 25.645 -3.091 3.498  -0.183 H091 T6V 25 
T6V H111 H9  H 0 0 N N N N N N 6.830  -3.394 24.123 -0.645 0.444  -1.878 H111 T6V 26 
T6V H121 H10 H 0 0 N N N N N N 4.483  -4.905 21.690 0.669  -1.870 1.721  H121 T6V 27 
T6V H141 H11 H 0 0 N N N N N N 3.562  -8.307 22.168 3.237  -0.985 -1.436 H141 T6V 28 
T6V H182 H12 H 0 0 N N N N N N 4.350  -4.386 23.961 0.207  0.857  1.558  H182 T6V 29 
T6V H181 H13 H 0 0 N N N N N N 5.811  -5.343 24.381 1.697  0.173  2.297  H181 T6V 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T6V O01 C02  DOUB N N 1  
T6V C02 C03  SING N N 2  
T6V C02 N05  SING N N 3  
T6V C06 C07  DOUB Y N 4  
T6V C07 C08  SING Y N 5  
T6V C08 C09  DOUB Y N 6  
T6V C09 C10  SING Y N 7  
T6V C10 C11  DOUB Y N 8  
T6V N05 C06  SING N N 9  
T6V N05 C12  SING N N 10 
T6V C12 C13  SING N N 11 
T6V C13 C14  DOUB N N 12 
T6V C14 S15  SING N N 13 
T6V S15 O16  DOUB N N 14 
T6V S15 O17  DOUB N N 15 
T6V S15 C18  SING N N 16 
T6V C06 C11  SING Y N 17 
T6V C12 C18  SING N N 18 
T6V C10 H101 SING N N 19 
T6V C13 H131 SING N N 20 
T6V C03 H031 SING N N 21 
T6V C03 H032 SING N N 22 
T6V C03 H1   SING N N 23 
T6V C07 H071 SING N N 24 
T6V C08 H081 SING N N 25 
T6V C09 H091 SING N N 26 
T6V C11 H111 SING N N 27 
T6V C12 H121 SING N N 28 
T6V C14 H141 SING N N 29 
T6V C18 H182 SING N N 30 
T6V C18 H181 SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T6V SMILES           ACDLabs              12.01 "c1cc(ccc1)N(C(C)=O)C2C=CS(C2)(=O)=O"                                                              
T6V InChI            InChI                1.03  "InChI=1S/C12H13NO3S/c1-10(14)13(11-5-3-2-4-6-11)12-7-8-17(15,16)9-12/h2-8,12H,9H2,1H3/t12-/m0/s1" 
T6V InChIKey         InChI                1.03  KBIYZUQDVPCCPL-LBPRGKRZSA-N                                                                        
T6V SMILES_CANONICAL CACTVS               3.385 "CC(=O)N([C@@H]1C[S](=O)(=O)C=C1)c2ccccc2"                                                         
T6V SMILES           CACTVS               3.385 "CC(=O)N([CH]1C[S](=O)(=O)C=C1)c2ccccc2"                                                           
T6V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N(c1ccccc1)[C@@H]2CS(=O)(=O)C=C2"                                                           
T6V SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)N(c1ccccc1)C2CS(=O)(=O)C=C2"                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
T6V "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(3S)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]-N-phenylacetamide"          
T6V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3~{S})-1,1-bis(oxidanylidene)-2,3-dihydrothiophen-3-yl]-~{N}-phenyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T6V "Create component" 2020-03-16 RCSB 
T6V "Initial release"  2020-03-25 RCSB 
T6V "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            T6V 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C03 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
