data_RNV
#

_chem_comp.id                                   RNV
_chem_comp.name                                 "2-[(4-amino-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-2-yl)sulfanyl]-N-[2-(diethylamino)ethyl]acetamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H27 N5 O S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-17
_chem_comp.pdbx_modified_date                   2020-05-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       393.570
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RNV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VUS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RNV  C10  C1   C  0  1  N  N  N  19.872  -11.452  42.024   6.089  -0.955   0.056  C10  RNV   1  
RNV  C12  C2   C  0  1  N  N  N  17.808  -12.677  42.307   7.833   0.292   1.183  C12  RNV   2  
RNV  N01  N1   N  0  1  N  N  N  22.539  -11.385  37.623  -2.561  -2.386   0.238  N01  RNV   3  
RNV  C02  C3   C  0  1  Y  N  N  21.290  -10.881  37.088  -2.523  -1.011   0.099  C02  RNV   4  
RNV  N03  N2   N  0  1  Y  N  N  20.741   -9.840  37.693  -1.364  -0.375   0.029  N03  RNV   5  
RNV  C04  C4   C  0  1  Y  N  N  19.593   -9.337  37.252  -1.313   0.945  -0.105  C04  RNV   6  
RNV  S05  S1   S  0  1  N  N  N  18.908   -7.889  38.121   0.259   1.735  -0.192  S05  RNV   7  
RNV  C06  C5   C  0  1  N  N  N  20.234   -7.211  39.206   1.344   0.293  -0.050  C06  RNV   8  
RNV  C07  C6   C  0  1  N  N  N  20.143   -7.899  40.596   2.783   0.740  -0.102  C07  RNV   9  
RNV  N08  N3   N  0  1  N  N  N  20.303   -9.354  40.755   3.774  -0.169  -0.014  N08  RNV  10  
RNV  C09  C7   C  0  1  N  N  N  20.197   -9.944  42.108   5.172   0.264  -0.063  C09  RNV  11  
RNV  N11  N4   N  0  1  N  N  N  18.538  -11.717  41.471   7.491  -0.520   0.007  N11  RNV  12  
RNV  C13  C8   C  0  1  N  N  N  18.687  -13.686  43.062   9.139   1.044   0.921  C13  RNV  13  
RNV  C14  C9   C  0  1  N  N  N  18.617  -12.183  40.083   8.395  -1.671  -0.120  C14  RNV  14  
RNV  C15  C10  C  0  1  N  N  N  17.484  -11.593  39.239   8.356  -2.194  -1.557  C15  RNV  15  
RNV  O16  O1   O  0  1  N  N  N  19.931   -7.237  41.552   3.048   1.917  -0.222  O16  RNV  16  
RNV  N17  N5   N  0  1  Y  N  N  18.935   -9.831  36.210  -2.405   1.684  -0.176  N17  RNV  17  
RNV  C18  C11  C  0  1  Y  N  N  19.420  -10.882  35.535  -3.621   1.122  -0.113  C18  RNV  18  
RNV  C19  C12  C  0  1  Y  N  N  20.629  -11.444  35.960  -3.726  -0.260   0.022  C19  RNV  19  
RNV  C20  C13  C  0  1  Y  N  N  21.065  -12.636  35.110  -5.110  -0.716   0.076  C20  RNV  20  
RNV  C21  C14  C  0  1  Y  N  N  20.107  -12.850  34.093  -6.006   0.267  -0.012  C21  RNV  21  
RNV  C22  C15  C  0  1  N  N  N  20.244  -13.976  33.042  -7.511   0.060   0.018  C22  RNV  22  
RNV  C23  C16  C  0  1  N  N  N  21.580  -14.777  33.156  -7.811  -1.419  -0.234  C23  RNV  23  
RNV  C24  C17  C  0  1  N  N  N  22.726  -14.015  33.865  -6.948  -2.269   0.704  C24  RNV  24  
RNV  C25  C18  C  0  1  N  N  N  22.300  -13.501  35.237  -5.488  -2.185   0.222  C25  RNV  25  
RNV  S26  S2   S  0  1  Y  N  N  18.854  -11.722  34.217  -5.226   1.830  -0.188  S26  RNV  26  
RNV  H1   H1   H  0  1  N  N  N  19.924  -11.880  43.036   5.899  -1.460   1.003  H1   RNV  27  
RNV  H2   H2   H  0  1  N  N  N  20.621  -11.938  41.382   5.891  -1.640  -0.768  H2   RNV  28  
RNV  H3   H3   H  0  1  N  N  N  17.227  -12.110  43.049   7.034   1.008   1.375  H3   RNV  29  
RNV  H4   H4   H  0  1  N  N  N  17.122  -13.241  41.658   7.955  -0.358   2.049  H4   RNV  30  
RNV  H5   H5   H  0  1  N  N  N  22.809  -10.836  38.414  -1.751  -2.875   0.452  H5   RNV  31  
RNV  H6   H6   H  0  1  N  N  N  22.421  -12.338  37.904  -3.398  -2.862   0.121  H6   RNV  32  
RNV  H7   H7   H  0  1  N  N  N  21.218   -7.412  38.757   1.154  -0.213   0.896  H7   RNV  33  
RNV  H8   H8   H  0  1  N  N  N  20.099   -6.125  39.321   1.147  -0.392  -0.874  H8   RNV  34  
RNV  H9   H9   H  0  1  N  N  N  20.481   -9.935  39.961   3.561  -1.111   0.083  H9   RNV  35  
RNV  H10  H10  H  0  1  N  N  N  21.153   -9.810  42.636   5.370   0.950   0.761  H10  RNV  36  
RNV  H11  H11  H  0  1  N  N  N  19.397   -9.433  42.663   5.362   0.770  -1.010  H11  RNV  37  
RNV  H13  H13  H  0  1  N  N  N  18.049  -14.357  43.656   9.338   1.725   1.749  H13  RNV  38  
RNV  H14  H14  H  0  1  N  N  N  19.269  -14.278  42.340   9.958   0.330   0.832  H14  RNV  39  
RNV  H15  H15  H  0  1  N  N  N  19.373  -13.146  43.731   9.052   1.613  -0.005  H15  RNV  40  
RNV  H16  H16  H  0  1  N  N  N  18.543  -13.280  40.068   9.411  -1.363   0.127  H16  RNV  41  
RNV  H17  H17  H  0  1  N  N  N  19.582  -11.875  39.655   8.078  -2.459   0.563  H17  RNV  42  
RNV  H18  H18  H  0  1  N  N  N  17.568  -11.959  38.205   9.005  -3.066  -1.644  H18  RNV  43  
RNV  H19  H19  H  0  1  N  N  N  16.515  -11.901  39.659   7.335  -2.474  -1.814  H19  RNV  44  
RNV  H20  H20  H  0  1  N  N  N  17.555  -10.495  39.247   8.702  -1.415  -2.237  H20  RNV  45  
RNV  H21  H21  H  0  1  N  N  N  20.193  -13.525  32.040  -7.900   0.351   0.993  H21  RNV  46  
RNV  H22  H22  H  0  1  N  N  N  19.406  -14.677  33.172  -7.978   0.665  -0.760  H22  RNV  47  
RNV  H23  H23  H  0  1  N  N  N  21.380  -15.700  33.720  -8.865  -1.616  -0.038  H23  RNV  48  
RNV  H24  H24  H  0  1  N  N  N  21.915  -15.033  32.140  -7.578  -1.668  -1.269  H24  RNV  49  
RNV  H25  H25  H  0  1  N  N  N  23.582  -14.694  33.989  -7.040  -1.893   1.723  H25  RNV  50  
RNV  H26  H26  H  0  1  N  N  N  23.024  -13.160  33.241  -7.280  -3.306   0.665  H26  RNV  51  
RNV  H27  H27  H  0  1  N  N  N  22.079  -14.356  35.893  -5.372  -2.689  -0.737  H27  RNV  52  
RNV  H28  H28  H  0  1  N  N  N  23.117  -12.907  35.672  -4.844  -2.656   0.965  H28  RNV  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RNV  C22  C23  SING  N  N   1  
RNV  C22  C21  SING  N  N   2  
RNV  C23  C24  SING  N  N   3  
RNV  C24  C25  SING  N  N   4  
RNV  C21  S26  SING  Y  N   5  
RNV  C21  C20  DOUB  Y  N   6  
RNV  S26  C18  SING  Y  N   7  
RNV  C20  C25  SING  N  N   8  
RNV  C20  C19  SING  Y  N   9  
RNV  C18  C19  DOUB  Y  N  10  
RNV  C18  N17  SING  Y  N  11  
RNV  C19  C02  SING  Y  N  12  
RNV  N17  C04  DOUB  Y  N  13  
RNV  C02  N01  SING  N  N  14  
RNV  C02  N03  DOUB  Y  N  15  
RNV  C04  N03  SING  Y  N  16  
RNV  C04  S05  SING  N  N  17  
RNV  S05  C06  SING  N  N  18  
RNV  C06  C07  SING  N  N  19  
RNV  C15  C14  SING  N  N  20  
RNV  C14  N11  SING  N  N  21  
RNV  C07  N08  SING  N  N  22  
RNV  C07  O16  DOUB  N  N  23  
RNV  N08  C09  SING  N  N  24  
RNV  N11  C10  SING  N  N  25  
RNV  N11  C12  SING  N  N  26  
RNV  C10  C09  SING  N  N  27  
RNV  C12  C13  SING  N  N  28  
RNV  C10  H1   SING  N  N  29  
RNV  C10  H2   SING  N  N  30  
RNV  C12  H3   SING  N  N  31  
RNV  C12  H4   SING  N  N  32  
RNV  N01  H5   SING  N  N  33  
RNV  N01  H6   SING  N  N  34  
RNV  C06  H7   SING  N  N  35  
RNV  C06  H8   SING  N  N  36  
RNV  N08  H9   SING  N  N  37  
RNV  C09  H10  SING  N  N  38  
RNV  C09  H11  SING  N  N  39  
RNV  C13  H13  SING  N  N  40  
RNV  C13  H14  SING  N  N  41  
RNV  C13  H15  SING  N  N  42  
RNV  C14  H16  SING  N  N  43  
RNV  C14  H17  SING  N  N  44  
RNV  C15  H18  SING  N  N  45  
RNV  C15  H19  SING  N  N  46  
RNV  C15  H20  SING  N  N  47  
RNV  C22  H21  SING  N  N  48  
RNV  C22  H22  SING  N  N  49  
RNV  C23  H23  SING  N  N  50  
RNV  C23  H24  SING  N  N  51  
RNV  C24  H25  SING  N  N  52  
RNV  C24  H26  SING  N  N  53  
RNV  C25  H27  SING  N  N  54  
RNV  C25  H28  SING  N  N  55  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RNV  SMILES            ACDLabs               12.01  "C(CNC(CSc1nc(N)c2c(n1)sc3c2CCCC3)=O)N(CC)CC"  
RNV  InChI             InChI                 1.03   "InChI=1S/C18H27N5OS2/c1-3-23(4-2)10-9-20-14(24)11-25-18-21-16(19)15-12-7-5-6-8-13(12)26-17(15)22-18/h3-11H2,1-2H3,(H,20,24)(H2,19,21,22)"  
RNV  InChIKey          InChI                 1.03   IQQWKKVZCVYLKR-UHFFFAOYSA-N  
RNV  SMILES_CANONICAL  CACTVS                3.385  "CCN(CC)CCNC(=O)CSc1nc(N)c2c3CCCCc3sc2n1"  
RNV  SMILES            CACTVS                3.385  "CCN(CC)CCNC(=O)CSc1nc(N)c2c3CCCCc3sc2n1"  
RNV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCN(CC)CCNC(=O)CSc1nc(c2c3c(sc2n1)CCCC3)N"  
RNV  SMILES            "OpenEye OEToolkits"  2.0.7  "CCN(CC)CCNC(=O)CSc1nc(c2c3c(sc2n1)CCCC3)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RNV  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-[(4-amino-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-2-yl)sulfanyl]-N-[2-(diethylamino)ethyl]acetamide"  
RNV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-[(4-azanyl-5,6,7,8-tetrahydro-[1]benzothiolo[2,3-d]pyrimidin-2-yl)sulfanyl]-~{N}-[2-(diethylamino)ethyl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RNV  "Create component"  2020-02-17  RCSB  
RNV  "Initial release"   2020-06-03  RCSB  
##
