data_R6V
#

_chem_comp.id                                   R6V
_chem_comp.name                                 "(3R)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H32 N8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-03
_chem_comp.pdbx_modified_date                   2021-02-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       480.607
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R6V
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VNC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R6V  C13  C1   C  0  1  Y  N  N  32.001  -1.626  11.409  -3.533   0.399  -0.160  C13  R6V   1  
R6V  C15  C2   C  0  1  Y  N  N  33.362   0.109  12.912  -1.368  -0.891  -0.479  C15  R6V   2  
R6V  C17  C3   C  0  1  Y  N  N  34.868   1.232  14.274   0.790  -0.092  -0.247  C17  R6V   3  
R6V  C20  C4   C  0  1  Y  N  N  38.658   1.142  14.775   3.603  -0.270  -0.796  C20  R6V   4  
R6V  C21  C5   C  0  1  Y  N  N  39.829   0.547  14.329   4.971  -0.458  -0.744  C21  R6V   5  
R6V  C22  C6   C  0  1  Y  N  N  39.784  -0.392  13.317   5.764   0.417  -0.025  C22  R6V   6  
R6V  C24  C7   C  0  1  N  N  N  41.841  -1.600  13.972   7.693   0.018   1.484  C24  R6V   7  
R6V  C28  C8   C  0  1  N  N  N  41.830  -0.069  12.055   7.965   1.436  -0.552  C28  R6V   8  
R6V  C02  C9   C  0  1  N  N  N  31.337  -4.665  11.875  -4.958   2.993  -1.531  C02  R6V   9  
R6V  C03  C10  C  0  1  N  N  N  31.529  -4.730  10.368  -5.411   2.590  -0.189  C03  R6V  10  
R6V  C04  C11  C  0  1  N  N  R  31.439  -3.343   9.741  -5.921   1.148  -0.235  C04  R6V  11  
R6V  C05  C12  C  0  1  N  N  N  31.815  -3.405   8.252  -6.506   0.771   1.127  C05  R6V  12  
R6V  C06  C13  C  0  1  N  N  N  31.165  -2.076   7.508  -7.069  -0.665   1.094  C06  R6V  13  
R6V  C07  C14  C  0  1  N  N  N  30.546  -2.503   6.369  -8.350  -0.655   1.946  C07  R6V  14  
R6V  C08  C15  C  0  1  N  N  N  30.150  -4.018   6.643  -8.521   0.787   2.468  C08  R6V  15  
R6V  C09  C16  C  0  1  N  N  N  31.248  -4.516   7.685  -7.734   1.656   1.454  C09  R6V  16  
R6V  C12  C17  C  0  1  Y  N  N  34.185  -1.509  11.048  -3.708  -1.454  -1.404  C12  R6V  17  
R6V  C14  C18  C  0  1  Y  N  N  33.165  -0.958  11.830  -2.816  -0.648  -0.668  C14  R6V  18  
R6V  C19  C19  C  0  1  Y  N  N  37.435   0.796  14.219   3.026   0.803  -0.128  C19  R6V  19  
R6V  C23  C20  C  0  1  N  N  N  41.063  -1.070  12.828   7.255   0.209   0.030  C23  R6V  20  
R6V  C25  C21  C  0  1  N  N  N  43.185  -2.180  13.529   9.215  -0.133   1.540  C25  R6V  21  
R6V  C27  C22  C  0  1  N  N  N  43.147  -0.674  11.577   9.480   1.244  -0.437  C27  R6V  22  
R6V  C29  C23  C  0  1  Y  N  N  38.566  -0.739  12.759   5.191   1.483   0.645  C29  R6V  23  
R6V  C30  C24  C  0  1  Y  N  N  37.401  -0.149  13.206   3.825   1.680   0.593  C30  R6V  24  
R6V  C32  C25  C  0  1  Y  N  N  32.619   1.775  14.455   0.520  -2.382  -0.198  C32  R6V  25  
R6V  C33  C26  C  0  1  Y  N  N  32.301   0.848  13.489  -0.866  -2.200  -0.371  C33  R6V  26  
R6V  C34  C27  C  0  1  Y  N  N  30.898   0.927  13.341  -1.453  -3.538  -0.395  C34  R6V  27  
R6V  C35  C28  C  0  1  Y  N  N  30.428   1.893  14.223  -0.442  -4.409  -0.242  C35  R6V  28  
R6V  N01  N1   N  0  1  N  N  N  31.072  -4.631  12.970  -4.609   3.304  -2.566  N01  R6V  29  
R6V  N10  N2   N  0  1  Y  N  N  32.342  -2.472  10.461  -4.810   0.248  -0.556  N10  R6V  30  
R6V  N11  N3   N  0  1  Y  N  N  33.653  -2.417  10.237  -4.896  -0.917  -1.328  N11  R6V  31  
R6V  N16  N4   N  0  1  Y  N  N  34.595   0.334  13.338  -0.509   0.123  -0.411  N16  R6V  32  
R6V  N18  N5   N  0  1  N  N  N  36.236   1.462  14.724   1.643   0.999  -0.183  N18  R6V  33  
R6V  N26  N6   N  0  1  N  N  N  43.955  -1.228  12.694   9.847   1.066   0.974  N26  R6V  34  
R6V  N31  N7   N  0  1  Y  N  N  33.914   1.945  14.826   1.302  -1.306  -0.142  N31  R6V  35  
R6V  N36  N8   N  0  1  Y  N  N  31.468   2.385  14.881   0.743  -3.729  -0.123  N36  R6V  36  
R6V  H1   H1   H  0  1  N  N  N  31.004  -1.472  11.795  -3.145   1.200   0.453  H1   R6V  37  
R6V  H2   H2   H  0  1  N  N  N  38.699   1.881  15.562   2.985  -0.953  -1.358  H2   R6V  38  
R6V  H3   H3   H  0  1  N  N  N  40.776   0.818  14.773   5.421  -1.289  -1.265  H3   R6V  39  
R6V  H4   H4   H  0  1  N  N  N  42.024  -0.784  14.686   7.391   0.885   2.072  H4   R6V  40  
R6V  H5   H5   H  0  1  N  N  N  41.256  -2.392  14.463   7.223  -0.878   1.891  H5   R6V  41  
R6V  H6   H6   H  0  1  N  N  N  42.040   0.801  12.694   7.690   1.552  -1.600  H6   R6V  42  
R6V  H7   H7   H  0  1  N  N  N  41.238   0.250  11.184   7.667   2.325   0.004  H7   R6V  43  
R6V  H8   H8   H  0  1  N  N  N  30.748  -5.371   9.934  -4.579   2.659   0.511  H8   R6V  44  
R6V  H9   H9   H  0  1  N  N  N  32.518  -5.159  10.150  -6.216   3.250   0.136  H9   R6V  45  
R6V  H10  H10  H  0  1  N  N  N  30.406  -2.975   9.832  -6.693   1.059  -0.999  H10  R6V  46  
R6V  H11  H11  H  0  1  N  N  N  32.908  -3.376   8.134  -5.749   0.866   1.906  H11  R6V  47  
R6V  H12  H12  H  0  1  N  N  N  31.961  -1.360   7.256  -7.305  -0.950   0.069  H12  R6V  48  
R6V  H13  H13  H  0  1  N  N  N  30.434  -1.593   8.174  -6.344  -1.360   1.517  H13  R6V  49  
R6V  H14  H14  H  0  1  N  N  N  31.230  -2.434   5.511  -9.207  -0.934   1.334  H14  R6V  50  
R6V  H15  H15  H  0  1  N  N  N  29.647  -1.901   6.171  -8.248  -1.345   2.784  H15  R6V  51  
R6V  H16  H16  H  0  1  N  N  N  29.141  -4.087   7.074  -9.574   1.067   2.476  H16  R6V  52  
R6V  H17  H17  H  0  1  N  N  N  30.194  -4.608   5.716  -8.091   0.885   3.465  H17  R6V  53  
R6V  H18  H18  H  0  1  N  N  N  30.775  -5.134   8.462  -7.426   2.597   1.909  H18  R6V  54  
R6V  H19  H19  H  0  1  N  N  N  32.017  -5.106   7.166  -8.328   1.835   0.557  H19  R6V  55  
R6V  H20  H20  H  0  1  N  N  N  35.230  -1.241  11.095  -3.455  -2.362  -1.933  H20  R6V  56  
R6V  H21  H21  H  0  1  N  N  N  40.785  -1.902  12.165   7.522  -0.674  -0.550  H21  R6V  57  
R6V  H22  H22  H  0  1  N  N  N  43.002  -3.095  12.946   9.530  -0.255   2.576  H22  R6V  58  
R6V  H23  H23  H  0  1  N  N  N  43.777  -2.427  14.423   9.514  -1.008   0.963  H23  R6V  59  
R6V  H24  H24  H  0  1  N  N  N  42.926  -1.483  10.866   9.779   0.362  -1.003  H24  R6V  60  
R6V  H25  H25  H  0  1  N  N  N  43.732   0.108  11.072   9.988   2.122  -0.837  H25  R6V  61  
R6V  H26  H26  H  0  1  N  N  N  38.527  -1.475  11.970   5.813   2.165   1.206  H26  R6V  62  
R6V  H27  H27  H  0  1  N  N  N  36.456  -0.426  12.763   3.379   2.513   1.116  H27  R6V  63  
R6V  H28  H28  H  0  1  N  N  N  30.297   0.340  12.662  -2.499  -3.779  -0.511  H28  R6V  64  
R6V  H29  H29  H  0  1  N  N  N  29.397   2.190  14.350  -0.548  -5.484  -0.216  H29  R6V  65  
R6V  H30  H30  H  0  1  N  N  N  36.366   2.140  15.447   1.280   1.899  -0.177  H30  R6V  66  
R6V  H31  H31  H  0  1  N  N  N  44.747  -1.704  12.312  10.850   1.033   1.085  H31  R6V  67  
R6V  H33  H33  H  0  1  N  N  N  31.420   3.095  15.583   1.612  -4.143  -0.004  H33  R6V  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R6V  C07  C08  SING  N  N   1  
R6V  C07  C06  SING  N  N   2  
R6V  C08  C09  SING  N  N   3  
R6V  C06  C05  SING  N  N   4  
R6V  C09  C05  SING  N  N   5  
R6V  C05  C04  SING  N  N   6  
R6V  C04  C03  SING  N  N   7  
R6V  C04  N10  SING  N  N   8  
R6V  N11  N10  SING  Y  N   9  
R6V  N11  C12  DOUB  Y  N  10  
R6V  C03  C02  SING  N  N  11  
R6V  N10  C13  SING  Y  N  12  
R6V  C12  C14  SING  Y  N  13  
R6V  C13  C14  DOUB  Y  N  14  
R6V  C27  C28  SING  N  N  15  
R6V  C27  N26  SING  N  N  16  
R6V  C14  C15  SING  N  N  17  
R6V  C02  N01  TRIP  N  N  18  
R6V  C28  C23  SING  N  N  19  
R6V  N26  C25  SING  N  N  20  
R6V  C29  C30  DOUB  Y  N  21  
R6V  C29  C22  SING  Y  N  22  
R6V  C23  C22  SING  N  N  23  
R6V  C23  C24  SING  N  N  24  
R6V  C15  N16  DOUB  Y  N  25  
R6V  C15  C33  SING  Y  N  26  
R6V  C30  C19  SING  Y  N  27  
R6V  C22  C21  DOUB  Y  N  28  
R6V  N16  C17  SING  Y  N  29  
R6V  C34  C33  SING  Y  N  30  
R6V  C34  C35  DOUB  Y  N  31  
R6V  C33  C32  DOUB  Y  N  32  
R6V  C25  C24  SING  N  N  33  
R6V  C19  N18  SING  N  N  34  
R6V  C19  C20  DOUB  Y  N  35  
R6V  C35  N36  SING  Y  N  36  
R6V  C17  N18  SING  N  N  37  
R6V  C17  N31  DOUB  Y  N  38  
R6V  C21  C20  SING  Y  N  39  
R6V  C32  N31  SING  Y  N  40  
R6V  C32  N36  SING  Y  N  41  
R6V  C13  H1   SING  N  N  42  
R6V  C20  H2   SING  N  N  43  
R6V  C21  H3   SING  N  N  44  
R6V  C24  H4   SING  N  N  45  
R6V  C24  H5   SING  N  N  46  
R6V  C28  H6   SING  N  N  47  
R6V  C28  H7   SING  N  N  48  
R6V  C03  H8   SING  N  N  49  
R6V  C03  H9   SING  N  N  50  
R6V  C04  H10  SING  N  N  51  
R6V  C05  H11  SING  N  N  52  
R6V  C06  H12  SING  N  N  53  
R6V  C06  H13  SING  N  N  54  
R6V  C07  H14  SING  N  N  55  
R6V  C07  H15  SING  N  N  56  
R6V  C08  H16  SING  N  N  57  
R6V  C08  H17  SING  N  N  58  
R6V  C09  H18  SING  N  N  59  
R6V  C09  H19  SING  N  N  60  
R6V  C12  H20  SING  N  N  61  
R6V  C23  H21  SING  N  N  62  
R6V  C25  H22  SING  N  N  63  
R6V  C25  H23  SING  N  N  64  
R6V  C27  H24  SING  N  N  65  
R6V  C27  H25  SING  N  N  66  
R6V  C29  H26  SING  N  N  67  
R6V  C30  H27  SING  N  N  68  
R6V  C34  H28  SING  N  N  69  
R6V  C35  H29  SING  N  N  70  
R6V  N18  H30  SING  N  N  71  
R6V  N26  H31  SING  N  N  72  
R6V  N36  H33  SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R6V  SMILES            ACDLabs               12.01  "c5c(c3nc(Nc2ccc(C1CCNCC1)cc2)nc4nccc34)cnn5C(CC#N)C6CCCC6"  
R6V  InChI             InChI                 1.03   "InChI=1S/C28H32N8/c29-13-9-25(21-3-1-2-4-21)36-18-22(17-32-36)26-24-12-16-31-27(24)35-28(34-26)33-23-7-5-19(6-8-23)20-10-14-30-15-11-20/h5-8,12,16-18,20-21,25,30H,1-4,9-11,14-15H2,(H2,31,33,34,35)/t25-/m1/s1"  
R6V  InChIKey          InChI                 1.03   RGIJZWRVCBSGJV-RUZDIDTESA-N  
R6V  SMILES_CANONICAL  CACTVS                3.385  "N#CC[C@H](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36"  
R6V  SMILES            CACTVS                3.385  "N#CC[CH](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36"  
R6V  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)[C@H](CC#N)C6CCCC6"  
R6V  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)C(CC#N)C6CCCC6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R6V  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile"  
R6V  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{R})-3-cyclopentyl-3-[4-[2-[(4-piperidin-4-ylphenyl)amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]pyrazol-1-yl]propanenitrile"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R6V  "Create component"  2020-02-03  RCSB  
R6V  "Initial release"   2021-02-17  RCSB  
##
