data_G6V
#

_chem_comp.id                                   G6V
_chem_comp.name                                 "2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H18 Cl2 F N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "oxazolidinone antibiotic LZD-5"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       406.236
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G6V
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DDD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G6V  C4    C1   C   0  1  Y  N  N  213.251  195.905  209.970   1.704   0.396   0.267  C4    G6V   1  
G6V  C3    C2   C   0  1  Y  N  N  212.120  195.124  209.701   2.435   1.240  -0.558  C3    G6V   2  
G6V  C2    C3   C   0  1  Y  N  N  211.847  194.734  208.405   3.797   1.053  -0.703  C2    G6V   3  
G6V  C1    C4   C   0  1  Y  N  N  212.602  195.046  207.265   4.433   0.020  -0.023  C1    G6V   4  
G6V  C16   C5   C   0  1  N  N  N  210.293  193.359  205.221   7.606  -1.617  -1.005  C16   G6V   5  
G6V  C5    C6   C   0  1  Y  N  N  214.059  196.265  208.871   2.340  -0.631   0.950  C5    G6V   6  
G6V  C18   C7   C   0  1  N  N  N  212.375  192.781  204.305   8.012  -0.217   0.897  C18   G6V   7  
G6V  C6    C8   C   0  1  Y  N  N  213.732  195.842  207.546   3.700  -0.822   0.801  C6    G6V   8  
G6V  C9    C9   C   0  1  N  N  N  212.819  196.004  212.525  -0.568  -0.231   1.254  C9    G6V   9  
G6V  C19   C10  C   0  1  N  N  N  213.141  193.975  204.964   6.506  -0.058   1.117  C19   G6V  10  
G6V  C10   C11  C   0  1  N  N  S  213.017  197.169  213.523  -1.955   0.408   1.048  C10   G6V  11  
G6V  C12   C12  C   0  1  N  N  N  214.561  197.217  211.788  -0.402   1.541  -0.184  C12   G6V  12  
G6V  C20   C13  C   0  1  N  N  N  211.823  198.230  213.558  -2.924  -0.602   0.429  C20   G6V  13  
G6V  C15   C14  C   0  1  N  N  N  210.911  194.763  205.397   6.095  -1.472  -0.804  C15   G6V  14  
G6V  C30   C15  C   0  1  N  N  N  210.148  199.516  212.100  -5.251  -0.675  -0.290  C30   G6V  15  
G6V  C31   C16  C   0  1  N  N  N  209.339  199.728  210.803  -6.598  -0.026  -0.481  C31   G6V  16  
G6V  F7    F1   F   0  1  N  N  N  210.702  193.952  208.231   4.510   1.873  -1.506  F7    G6V  17  
G6V  N14   N1   N   0  1  N  N  N  212.248  194.626  205.909   5.812  -0.174  -0.175  N14   G6V  18  
G6V  N29   N2   N   0  1  N  N  N  211.043  198.430  212.289  -4.233   0.029   0.243  N29   G6V  19  
G6V  N8    N3   N   0  1  N  N  N  213.571  196.355  211.325   0.322   0.586   0.415  N8    G6V  20  
G6V  O11   O1   O   0  1  N  N  N  214.250  197.734  213.049  -1.703   1.506   0.124  O11   G6V  21  
G6V  O13   O2   O   0  1  N  N  N  215.595  197.538  211.227   0.080   2.363  -0.938  O13   G6V  22  
G6V  O17   O3   O   0  1  N  N  N  211.289  192.358  205.113   8.266  -1.471   0.256  O17   G6V  23  
G6V  O32   O4   O   0  1  N  N  N  209.991  200.350  212.992  -5.083  -1.831  -0.617  O32   G6V  24  
G6V  CL33  CL1  CL  0  0  N  N  N  207.579  199.231  210.986  -7.778  -1.255  -1.072  CL33  G6V  25  
G6V  CL44  CL2  CL  0  0  N  N  N  209.311  201.509  210.356  -7.168   0.648   1.091  CL44  G6V  26  
G6V  H3    H1   H   0  1  N  N  N  211.463  194.828  210.505   1.941   2.042  -1.086  H3    G6V  27  
G6V  H16   H2   H   0  1  N  N  N  209.680  193.351  204.308   7.826  -2.601  -1.418  H16   G6V  28  
G6V  H161  H3   H   0  0  N  N  N  209.658  193.137  206.091   7.958  -0.846  -1.691  H161  G6V  29  
G6V  H5    H4   H   0  1  N  N  N  214.939  196.870  209.034   1.771  -1.283   1.596  H5    G6V  30  
G6V  H181  H5   H   0  0  N  N  N  211.990  193.099  203.325   8.376   0.594   0.266  H181  G6V  31  
G6V  H18   H6   H   0  1  N  N  N  213.071  191.940  204.170   8.525  -0.190   1.858  H18   G6V  32  
G6V  H6    H7   H   0  1  N  N  N  214.373  196.143  206.730   4.194  -1.624   1.329  H6    G6V  33  
G6V  H91   H8   H   0  1  N  N  N  211.752  195.887  212.284  -0.270  -0.171   2.301  H91   G6V  34  
G6V  H9    H9   H   0  1  N  N  N  213.203  195.067  212.954  -0.570  -1.268   0.917  H9    G6V  35  
G6V  H191  H10  H   0  0  N  N  N  214.031  193.600  205.491   6.152  -0.839   1.791  H191  G6V  36  
G6V  H19   H11  H   0  1  N  N  N  213.449  194.692  204.189   6.303   0.920   1.553  H19   G6V  37  
G6V  H10   H12  H   0  1  N  N  N  213.145  196.757  214.535  -2.347   0.783   1.993  H10   G6V  38  
G6V  H201  H13  H   0  0  N  N  N  212.253  199.203  213.839  -2.539  -0.930  -0.536  H201  G6V  39  
G6V  H20   H14  H   0  1  N  N  N  211.114  197.905  214.334  -3.026  -1.461   1.092  H20   G6V  40  
G6V  H15   H15  H   0  1  N  N  N  210.939  195.278  204.425   5.593  -1.525  -1.770  H15   G6V  41  
G6V  H151  H16  H   0  0  N  N  N  210.304  195.347  206.104   5.735  -2.274  -0.161  H151  G6V  42  
G6V  H311  H17  H   0  0  N  N  N  209.767  199.169  209.958  -6.513   0.778  -1.212  H311  G6V  43  
G6V  HN29  H18  H   0  0  N  N  N  211.159  197.770  211.546  -4.368   0.953   0.505  HN29  G6V  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G6V  C18   C19   SING  N  N   1  
G6V  C18   O17   SING  N  N   2  
G6V  C19   N14   SING  N  N   3  
G6V  O17   C16   SING  N  N   4  
G6V  C16   C15   SING  N  N   5  
G6V  C15   N14   SING  N  N   6  
G6V  N14   C1    SING  N  N   7  
G6V  C1    C6    DOUB  Y  N   8  
G6V  C1    C2    SING  Y  N   9  
G6V  C6    C5    SING  Y  N  10  
G6V  F7    C2    SING  N  N  11  
G6V  C2    C3    DOUB  Y  N  12  
G6V  C5    C4    DOUB  Y  N  13  
G6V  C3    C4    SING  Y  N  14  
G6V  C4    N8    SING  N  N  15  
G6V  CL44  C31   SING  N  N  16  
G6V  C31   CL33  SING  N  N  17  
G6V  C31   C30   SING  N  N  18  
G6V  O13   C12   DOUB  N  N  19  
G6V  N8    C12   SING  N  N  20  
G6V  N8    C9    SING  N  N  21  
G6V  C12   O11   SING  N  N  22  
G6V  C30   N29   SING  N  N  23  
G6V  C30   O32   DOUB  N  N  24  
G6V  N29   C20   SING  N  N  25  
G6V  C9    C10   SING  N  N  26  
G6V  O11   C10   SING  N  N  27  
G6V  C10   C20   SING  N  N  28  
G6V  C3    H3    SING  N  N  29  
G6V  C16   H16   SING  N  N  30  
G6V  C16   H161  SING  N  N  31  
G6V  C5    H5    SING  N  N  32  
G6V  C18   H181  SING  N  N  33  
G6V  C18   H18   SING  N  N  34  
G6V  C6    H6    SING  N  N  35  
G6V  C9    H91   SING  N  N  36  
G6V  C9    H9    SING  N  N  37  
G6V  C19   H191  SING  N  N  38  
G6V  C19   H19   SING  N  N  39  
G6V  C10   H10   SING  N  N  40  
G6V  C20   H201  SING  N  N  41  
G6V  C20   H20   SING  N  N  42  
G6V  C15   H15   SING  N  N  43  
G6V  C15   H151  SING  N  N  44  
G6V  C31   H311  SING  N  N  45  
G6V  N29   HN29  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G6V  SMILES            ACDLabs               12.01  "c2(N1CC(CNC(=O)C(Cl)Cl)OC1=O)cc(c(cc2)N3CCOCC3)F"  
G6V  InChI             InChI                 1.03   "InChI=1S/C16H18Cl2FN3O4/c17-14(18)15(23)20-8-11-9-22(16(24)26-11)10-1-2-13(12(19)7-10)21-3-5-25-6-4-21/h1-2,7,11,14H,3-6,8-9H2,(H,20,23)/t11-/m0/s1"  
G6V  InChIKey          InChI                 1.03   YEXPTKNKQPHGOQ-NSHDSACASA-N  
G6V  SMILES_CANONICAL  CACTVS                3.385  "Fc1cc(ccc1N2CCOCC2)N3C[C@H](CNC(=O)C(Cl)Cl)OC3=O"  
G6V  SMILES            CACTVS                3.385  "Fc1cc(ccc1N2CCOCC2)N3C[CH](CNC(=O)C(Cl)Cl)OC3=O"  
G6V  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1cc(c(cc1N2C[C@@H](OC2=O)CNC(=O)C(Cl)Cl)F)N3CCOCC3"  
G6V  SMILES            "OpenEye OEToolkits"  2.0.6  "c1cc(c(cc1N2CC(OC2=O)CNC(=O)C(Cl)Cl)F)N3CCOCC3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G6V  "SYSTEMATIC NAME"  ACDLabs               12.01  "2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide"  
G6V  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "2,2-bis(chloranyl)-~{N}-[[(5~{S})-3-(3-fluoranyl-4-morpholin-4-yl-phenyl)-2-oxidanylidene-1,3-oxazolidin-5-yl]methyl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G6V  "Create component"  2018-05-10  RCSB  
G6V  "Initial release"   2019-03-20  RCSB  
G6V  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     G6V
_pdbx_chem_comp_synonyms.name        "oxazolidinone antibiotic LZD-5"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
