data_DUV
# 
_chem_comp.id                                    DUV 
_chem_comp.name                                  "(2R)-2-methanoylhept-6-ynoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H10 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-09-21 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        154.163 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DUV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5YDL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DUV O1  O1  O 0 1 N N N N N N -12.088 56.037 -20.429 -2.338 -1.743 0.286  O1  DUV 1  
DUV C2  C1  C 0 1 N N N N N N -12.543 54.965 -19.946 -2.348 -0.607 -0.125 C2  DUV 2  
DUV O3  O2  O 0 1 N N N N N N -13.654 54.480 -20.299 -3.513 -0.012 -0.426 O3  DUV 3  
DUV C4  C2  C 0 1 N N R N N N -11.717 54.242 -18.901 -1.053 0.145  -0.295 C4  DUV 4  
DUV C5  C3  C 0 1 N N N N N N -11.822 52.720 -19.062 0.115  -0.752 0.120  C5  DUV 5  
DUV C6  C4  C 0 1 N N N N N N -11.111 52.214 -20.326 1.436  -0.035 -0.169 C6  DUV 6  
DUV C7  C5  C 0 1 N N N N N N -11.130 50.680 -20.443 2.604  -0.932 0.247  C7  DUV 7  
DUV C8  C6  C 0 1 N N N N N N -10.715 50.225 -21.843 3.874  -0.243 -0.032 C8  DUV 8  
DUV C9  C7  C 0 1 N N N N N N -10.403 49.872 -22.930 4.888  0.307  -0.254 C9  DUV 9  
DUV C10 C8  C 0 1 N N N N N N -12.171 54.720 -17.524 -1.071 1.379  0.569  C10 DUV 10 
DUV O11 O3  O 0 1 N N N N N N -13.078 54.204 -16.969 -0.963 2.471  0.065  O11 DUV 11 
DUV H1  H1  H 0 1 N N N N N N -14.052 55.042 -20.954 -4.318 -0.533 -0.296 H1  DUV 12 
DUV H2  H2  H 0 1 N N N N N N -10.663 54.528 -19.034 -0.935 0.434  -1.339 H2  DUV 13 
DUV H3  H3  H 0 1 N N N N N N -12.885 52.444 -19.120 0.045  -0.968 1.186  H3  DUV 14 
DUV H4  H4  H 0 1 N N N N N N -11.366 52.240 -18.184 0.076  -1.684 -0.443 H4  DUV 15 
DUV H5  H5  H 0 1 N N N N N N -10.065 52.552 -20.301 1.505  0.182  -1.235 H5  DUV 16 
DUV H6  H6  H 0 1 N N N N N N -11.613 52.641 -21.207 1.475  0.897  0.395  H6  DUV 17 
DUV H7  H7  H 0 1 N N N N N N -12.147 50.317 -20.235 2.534  -1.148 1.313  H7  DUV 18 
DUV H8  H8  H 0 1 N N N N N N -10.432 50.256 -19.707 2.565  -1.864 -0.317 H8  DUV 19 
DUV H9  H9  H 0 1 N N N N N N -10.124 49.556 -23.903 5.794  0.799  -0.452 H9  DUV 20 
DUV H10 H10 H 0 1 N N N N N N -11.656 55.542 -17.050 -1.181 1.287  1.640  H10 DUV 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DUV C9  C8  TRIP N N 1  
DUV C8  C7  SING N N 2  
DUV C7  C6  SING N N 3  
DUV O1  C2  DOUB N N 4  
DUV C6  C5  SING N N 5  
DUV O3  C2  SING N N 6  
DUV C2  C4  SING N N 7  
DUV C5  C4  SING N N 8  
DUV C4  C10 SING N N 9  
DUV C10 O11 DOUB N N 10 
DUV O3  H1  SING N N 11 
DUV C4  H2  SING N N 12 
DUV C5  H3  SING N N 13 
DUV C5  H4  SING N N 14 
DUV C6  H5  SING N N 15 
DUV C6  H6  SING N N 16 
DUV C7  H7  SING N N 17 
DUV C7  H8  SING N N 18 
DUV C9  H9  SING N N 19 
DUV C10 H10 SING N N 20 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DUV InChI            InChI                1.03  "InChI=1S/C8H10O3/c1-2-3-4-5-7(6-9)8(10)11/h1,6-7H,3-5H2,(H,10,11)/t7-/m1/s1" 
DUV InChIKey         InChI                1.03  XEBGKYCHRCIWRY-SSDOTTSWSA-N                                                   
DUV SMILES_CANONICAL CACTVS               3.385 "OC(=O)[C@H](CCCC#C)C=O"                                                      
DUV SMILES           CACTVS               3.385 "OC(=O)[CH](CCCC#C)C=O"                                                       
DUV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C#CCCC[C@H](C=O)C(=O)O"                                                      
DUV SMILES           "OpenEye OEToolkits" 2.0.6 "C#CCCCC(C=O)C(=O)O"                                                          
# 
_pdbx_chem_comp_identifier.comp_id           DUV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-methanoylhept-6-ynoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DUV "Create component" 2017-09-21 PDBJ 
DUV "Initial release"  2018-05-23 RCSB 
DUV "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            DUV 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C10 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
