data_BIV
#

_chem_comp.id                                   BIV
_chem_comp.name                                 "21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H54 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        GEMINI
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-06-20
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       502.769
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BIV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BIV  O2    O2    O  0  1  N  N  N   0.527  40.012  40.128   8.704   1.720   0.257  O2    BIV   1  
BIV  O3    O3    O  0  1  N  N  N   5.309  26.687  34.189  -6.964  -1.755   0.499  O3    BIV   2  
BIV  C1    C1    C  0  1  N  N  S   2.954  38.841  38.821   6.424  -0.285  -1.959  C1    BIV   3  
BIV  C2    C2    C  0  1  N  N  N   2.195  40.126  38.349   7.749   0.237  -1.393  C2    BIV   4  
BIV  C3    C3    C  0  1  N  N  R   0.641  40.021  38.704   7.480   1.120  -0.174  C3    BIV   5  
BIV  C4    C4    C  0  1  N  N  N  -0.013  38.700  38.121   6.899   0.274   0.963  C4    BIV   6  
BIV  C5    C5    C  0  1  N  N  N   0.749  37.388  38.437   5.634  -0.394   0.463  C5    BIV   7  
BIV  C6    C6    C  0  1  N  N  N   0.164  36.202  38.900   4.499  -0.394   1.192  C6    BIV   8  
BIV  C7    C7    C  0  1  N  N  N   0.731  34.862  39.215   3.296  -1.050   0.674  C7    BIV   9  
BIV  C8    C8    C  0  1  N  N  N   0.293  33.676  38.967   2.174  -1.050   1.395  C8    BIV  10  
BIV  C9    C9    C  0  1  N  N  N  -1.086  33.337  38.197   2.083  -0.386   2.761  C9    BIV  11  
BIV  C10   C10   C  0  1  N  N  N   2.302  37.573  38.146   5.703  -1.044  -0.863  C10   BIV  12  
BIV  C11   C11   C  0  1  N  N  N  -0.854  32.483  36.842   0.868   0.536   2.834  C11   BIV  13  
BIV  C12   C12   C  0  1  N  N  N   0.149  31.230  37.131  -0.407  -0.158   2.327  C12   BIV  14  
BIV  C13   C13   C  0  1  N  N  R   1.528  31.509  38.064  -0.159  -0.578   0.897  C13   BIV  15  
BIV  C14   C14   C  0  1  N  N  S   1.048  32.387  39.376   0.911  -1.699   0.914  C14   BIV  16  
BIV  C15   C15   C  0  1  N  N  N   2.528  32.527  40.201   0.885  -2.155  -0.547  C15   BIV  17  
BIV  C16   C16   C  0  1  N  N  N   3.213  31.141  39.832  -0.636  -2.175  -0.873  C16   BIV  18  
BIV  C17   C17   C  0  1  N  N  R   2.162  30.405  38.932  -1.307  -1.204   0.119  C17   BIV  19  
BIV  C18   C18   C  0  1  N  N  N   2.497  32.424  36.959   0.380   0.615   0.105  C18   BIV  20  
BIV  C19   C19   C  0  1  N  N  N   3.018  36.705  37.346   5.157  -2.239  -1.084  C19   BIV  21  
BIV  C20   C20   C  0  1  N  N  N   2.769  29.197  38.011  -2.077  -0.128  -0.649  C20   BIV  22  
BIV  C22   C22   C  0  1  N  N  N   4.011  29.247  37.027  -3.226  -0.778  -1.424  C22   BIV  23  
BIV  C23   C23   C  0  1  N  N  N   3.552  28.976  35.574  -4.209  -1.414  -0.439  C23   BIV  24  
BIV  C24   C24   C  0  1  N  N  N   4.529  28.989  34.492  -5.306  -2.145  -1.215  C24   BIV  25  
BIV  C25   C25   C  0  1  N  N  N   4.835  27.831  33.519  -6.290  -2.782  -0.231  C25   BIV  26  
BIV  C26   C26   C  0  1  N  N  N   3.587  27.494  32.708  -5.526  -3.682   0.742  C26   BIV  27  
BIV  C27   C27   C  0  1  N  N  N   5.961  28.247  32.490  -7.314  -3.616  -1.002  C27   BIV  28  
BIV  O1    O1    O  0  1  N  N  N   4.405  38.971  38.476   5.621   0.814  -2.393  O1    BIV  29  
BIV  C21   C21   C  0  1  N  N  N   3.073  28.025  38.858  -2.642   0.896   0.337  C21   BIV  30  
BIV  C28   C28   C  0  1  N  N  N   3.985  26.879  39.223  -3.317   2.031  -0.437  C28   BIV  31  
BIV  C29   C29   C  0  1  N  N  N   3.878  26.632  40.741  -3.768   3.118   0.541  C29   BIV  32  
BIV  C30   C30   C  0  1  N  N  N   3.163  25.279  41.112  -4.442   4.252  -0.232  C30   BIV  33  
BIV  O4    O4    O  0  1  N  N  N   3.195  24.266  39.934  -5.642   3.768  -0.839  O4    BIV  34  
BIV  C32   C32   C  0  1  N  N  N   1.702  25.567  41.507  -4.781   5.394   0.728  C32   BIV  35  
BIV  C33   C33   C  0  1  N  N  N   3.888  24.637  42.316  -3.493   4.764  -1.318  C33   BIV  36  
BIV  HO2   HO2   H  0  1  N  N  N   1.394  40.010  40.516   8.609   2.295   1.029  HO2   BIV  37  
BIV  HO3   HO3   H  0  1  N  N  N   5.416  25.977  33.567  -7.604  -2.086   1.143  HO3   BIV  38  
BIV  H1    H1    H  0  1  N  N  N   2.873  38.723  39.912   6.621  -0.951  -2.799  H1    BIV  39  
BIV  H21   1H2   H  0  1  N  N  N   2.305  40.224  37.259   8.374  -0.606  -1.098  H21   BIV  40  
BIV  H22   2H2   H  0  1  N  N  N   2.622  41.004  38.857   8.265   0.819  -2.156  H22   BIV  41  
BIV  H3    H3    H  0  1  N  N  N   0.111  40.874  38.255   6.769   1.901  -0.443  H3    BIV  42  
BIV  H41   1H4   H  0  1  N  N  N   0.001  38.807  37.026   7.622  -0.486   1.261  H41   BIV  43  
BIV  H42   2H4   H  0  1  N  N  N  -1.021  38.610  38.552   6.665   0.913   1.814  H42   BIV  44  
BIV  H6    H6    H  0  1  N  N  N  -0.902  36.274  39.059   4.477   0.089   2.158  H6    BIV  45  
BIV  H7    H7    H  0  1  N  N  N   1.673  34.889  39.743   3.317  -1.533  -0.292  H7    BIV  46  
BIV  H91   1H9   H  0  1  N  N  N  -1.552  34.292  37.913   1.996  -1.155   3.529  H91   BIV  47  
BIV  H92   2H9   H  0  1  N  N  N  -1.725  32.749  38.872   2.987   0.196   2.938  H92   BIV  48  
BIV  H111  1H11  H  0  0  N  N  N  -0.404  33.135  36.079   0.717   0.845   3.868  H111  BIV  49  
BIV  H112  2H11  H  0  0  N  N  N  -1.821  32.098  36.486   1.056   1.421   2.225  H112  BIV  50  
BIV  H121  1H12  H  0  0  N  N  N   0.536  30.951  36.140  -0.619  -1.035   2.938  H121  BIV  51  
BIV  H122  2H12  H  0  0  N  N  N  -0.442  30.469  37.662  -1.247   0.535   2.368  H122  BIV  52  
BIV  H14   H14   H  0  1  N  N  N   0.279  31.951  40.031   0.614  -2.507   1.583  H14   BIV  53  
BIV  H151  1H15  H  0  0  N  N  N   2.426  32.705  41.282   1.407  -1.441  -1.184  H151  BIV  54  
BIV  H152  2H15  H  0  0  N  N  N   3.118  33.390  39.860   1.315  -3.151  -0.649  H152  BIV  55  
BIV  H161  1H16  H  0  0  N  N  N   3.474  30.557  40.727  -0.803  -1.846  -1.899  H161  BIV  56  
BIV  H162  2H16  H  0  0  N  N  N   4.157  31.298  39.290  -1.036  -3.179  -0.732  H162  BIV  57  
BIV  H17   H17   H  0  1  N  N  N   1.432  29.887  39.571  -1.974  -1.740   0.794  H17   BIV  58  
BIV  H181  1H18  H  0  0  N  N  N   3.405  31.855  36.710   1.307   0.963   0.560  H181  BIV  59  
BIV  H182  2H18  H  0  0  N  N  N   2.779  33.380  37.424   0.571   0.312  -0.924  H182  BIV  60  
BIV  H183  3H18  H  0  0  N  N  N   1.923  32.618  36.041  -0.355   1.420   0.116  H183  BIV  61  
BIV  H191  1H19  H  0  0  N  N  N   2.659  35.822  36.838   5.223  -2.690  -2.063  H191  BIV  62  
BIV  H192  2H19  H  0  0  N  N  N   4.019  37.110  37.345   4.649  -2.757  -0.284  H192  BIV  63  
BIV  H20   H20   H  0  1  N  N  N   1.925  29.229  37.307  -1.405   0.372  -1.347  H20   BIV  64  
BIV  H221  1H22  H  0  0  N  N  N   4.737  28.476  37.325  -3.741  -0.020  -2.013  H221  BIV  65  
BIV  H222  2H22  H  0  0  N  N  N   4.476  30.242  37.081  -2.828  -1.546  -2.087  H222  BIV  66  
BIV  H231  1H23  H  0  0  N  N  N   2.895  29.828  35.344  -3.679  -2.123   0.197  H231  BIV  67  
BIV  H232  2H23  H  0  0  N  N  N   3.110  27.969  35.575  -4.658  -0.637   0.179  H232  BIV  68  
BIV  H241  1H24  H  0  0  N  N  N   5.463  29.006  35.073  -5.836  -1.436  -1.851  H241  BIV  69  
BIV  H242  2H24  H  0  0  N  N  N   4.196  29.809  33.838  -4.857  -2.923  -1.834  H242  BIV  70  
BIV  H261  1H26  H  0  0  N  N  N   3.736  26.537  32.187  -6.227  -4.135   1.444  H261  BIV  71  
BIV  H262  2H26  H  0  0  N  N  N   3.404  28.289  31.970  -5.012  -4.466   0.185  H262  BIV  72  
BIV  H263  3H26  H  0  0  N  N  N   2.722  27.413  33.382  -4.796  -3.088   1.291  H263  BIV  73  
BIV  H271  1H27  H  0  0  N  N  N   6.746  27.477  32.475  -7.858  -2.974  -1.695  H271  BIV  74  
BIV  H272  2H27  H  0  0  N  N  N   6.397  29.210  32.794  -6.800  -4.399  -1.559  H272  BIV  75  
BIV  H273  3H27  H  0  0  N  N  N   5.523  28.344  31.486  -8.015  -4.069  -0.300  H273  BIV  76  
BIV  HO1   HO1   H  0  1  N  N  N   4.505  38.999  37.532   4.766   0.554  -2.763  HO1   BIV  77  
BIV  H211  1H21  H  0  0  N  N  N   2.533  27.374  38.155  -3.374   0.412   0.984  H211  BIV  78  
BIV  H212  2H21  H  0  0  N  N  N   3.098  28.546  39.826  -1.833   1.301   0.944  H212  BIV  79  
BIV  H281  1H28  H  0  0  N  N  N   5.023  27.124  38.954  -2.610   2.454  -1.150  H281  BIV  80  
BIV  H282  2H28  H  0  0  N  N  N   3.683  25.974  38.676  -4.183   1.641  -0.971  H282  BIV  81  
BIV  H291  1H29  H  0  0  N  N  N   3.269  27.446  41.160  -4.475   2.694   1.255  H291  BIV  82  
BIV  H292  2H29  H  0  0  N  N  N   4.897  26.605  41.156  -2.901   3.507   1.076  H292  BIV  83  
BIV  HO4   HO4   H  0  1  N  N  N   3.202  24.738  39.110  -6.291   3.427  -0.208  HO4   BIV  84  
BIV  H321  1H32  H  0  0  N  N  N   1.057  24.753  41.144  -3.865   5.763   1.191  H321  BIV  85  
BIV  H322  2H32  H  0  0  N  N  N   1.381  26.518  41.057  -5.261   6.202   0.177  H322  BIV  86  
BIV  H323  3H32  H  0  0  N  N  N   1.624  25.636  42.602  -5.457   5.029   1.502  H323  BIV  87  
BIV  H331  1H33  H  0  0  N  N  N   3.423  23.668  42.549  -3.251   3.951  -2.002  H331  BIV  88  
BIV  H332  2H33  H  0  0  N  N  N   3.808  25.302  43.189  -3.973   5.572  -1.869  H332  BIV  89  
BIV  H333  3H33  H  0  0  N  N  N   4.949  24.484  42.067  -2.578   5.133  -0.855  H333  BIV  90  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BIV  O2   C3    SING  N  N   1  
BIV  O2   HO2   SING  N  N   2  
BIV  O3   C25   SING  N  N   3  
BIV  O3   HO3   SING  N  N   4  
BIV  C1   C2    SING  N  N   5  
BIV  C1   C10   SING  N  N   6  
BIV  C1   O1    SING  N  N   7  
BIV  C1   H1    SING  N  N   8  
BIV  C2   C3    SING  N  N   9  
BIV  C2   H21   SING  N  N  10  
BIV  C2   H22   SING  N  N  11  
BIV  C3   C4    SING  N  N  12  
BIV  C3   H3    SING  N  N  13  
BIV  C4   C5    SING  N  N  14  
BIV  C4   H41   SING  N  N  15  
BIV  C4   H42   SING  N  N  16  
BIV  C5   C6    DOUB  N  Z  17  
BIV  C5   C10   SING  N  N  18  
BIV  C6   C7    SING  N  N  19  
BIV  C6   H6    SING  N  N  20  
BIV  C7   C8    DOUB  N  E  21  
BIV  C7   H7    SING  N  N  22  
BIV  C8   C9    SING  N  N  23  
BIV  C8   C14   SING  N  N  24  
BIV  C9   C11   SING  N  N  25  
BIV  C9   H91   SING  N  N  26  
BIV  C9   H92   SING  N  N  27  
BIV  C10  C19   DOUB  N  N  28  
BIV  C11  C12   SING  N  N  29  
BIV  C11  H111  SING  N  N  30  
BIV  C11  H112  SING  N  N  31  
BIV  C12  C13   SING  N  N  32  
BIV  C12  H121  SING  N  N  33  
BIV  C12  H122  SING  N  N  34  
BIV  C13  C14   SING  N  N  35  
BIV  C13  C17   SING  N  N  36  
BIV  C13  C18   SING  N  N  37  
BIV  C14  C15   SING  N  N  38  
BIV  C14  H14   SING  N  N  39  
BIV  C15  C16   SING  N  N  40  
BIV  C15  H151  SING  N  N  41  
BIV  C15  H152  SING  N  N  42  
BIV  C16  C17   SING  N  N  43  
BIV  C16  H161  SING  N  N  44  
BIV  C16  H162  SING  N  N  45  
BIV  C17  C20   SING  N  N  46  
BIV  C17  H17   SING  N  N  47  
BIV  C18  H181  SING  N  N  48  
BIV  C18  H182  SING  N  N  49  
BIV  C18  H183  SING  N  N  50  
BIV  C19  H191  SING  N  N  51  
BIV  C19  H192  SING  N  N  52  
BIV  C20  C22   SING  N  N  53  
BIV  C20  C21   SING  N  N  54  
BIV  C20  H20   SING  N  N  55  
BIV  C22  C23   SING  N  N  56  
BIV  C22  H221  SING  N  N  57  
BIV  C22  H222  SING  N  N  58  
BIV  C23  C24   SING  N  N  59  
BIV  C23  H231  SING  N  N  60  
BIV  C23  H232  SING  N  N  61  
BIV  C24  C25   SING  N  N  62  
BIV  C24  H241  SING  N  N  63  
BIV  C24  H242  SING  N  N  64  
BIV  C25  C26   SING  N  N  65  
BIV  C25  C27   SING  N  N  66  
BIV  C26  H261  SING  N  N  67  
BIV  C26  H262  SING  N  N  68  
BIV  C26  H263  SING  N  N  69  
BIV  C27  H271  SING  N  N  70  
BIV  C27  H272  SING  N  N  71  
BIV  C27  H273  SING  N  N  72  
BIV  O1   HO1   SING  N  N  73  
BIV  C21  C28   SING  N  N  74  
BIV  C21  H211  SING  N  N  75  
BIV  C21  H212  SING  N  N  76  
BIV  C28  C29   SING  N  N  77  
BIV  C28  H281  SING  N  N  78  
BIV  C28  H282  SING  N  N  79  
BIV  C29  C30   SING  N  N  80  
BIV  C29  H291  SING  N  N  81  
BIV  C29  H292  SING  N  N  82  
BIV  C30  O4    SING  N  N  83  
BIV  C30  C32   SING  N  N  84  
BIV  C30  C33   SING  N  N  85  
BIV  O4   HO4   SING  N  N  86  
BIV  C32  H321  SING  N  N  87  
BIV  C32  H322  SING  N  N  88  
BIV  C32  H323  SING  N  N  89  
BIV  C33  H331  SING  N  N  90  
BIV  C33  H332  SING  N  N  91  
BIV  C33  H333  SING  N  N  92  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BIV  SMILES            ACDLabs               10.04  "OC3C(=C)/C(=C\C=C1/CCCC2(C)C(C(CCCC(O)(C)C)CCCC(O)(C)C)CCC12)CC(O)C3"  
BIV  InChI             InChI                 1.03   "InChI=1S/C32H54O4/c1-22-25(20-26(33)21-29(22)34)14-13-24-12-9-19-32(6)27(15-16-28(24)32)23(10-7-17-30(2,3)35)11-8-18-31(4,5)36/h13-14,23,26-29,33-36H,1,7-12,15-21H2,2-6H3/b24-13+,25-14-/t26-,27-,28+,29+,32-/m1/s1"  
BIV  InChIKey          InChI                 1.03   WTQXZYVWLNPNEX-LKUPKUSPSA-N  
BIV  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(O)CCCC(CCCC(C)(C)O)[C@H]1CC[C@H]2C(/CCC[C@]12C)=C/C=C3/C[C@@H](O)C[C@H](O)C3=C"  
BIV  SMILES            CACTVS                3.385  "CC(C)(O)CCCC(CCCC(C)(C)O)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C[CH](O)C3=C"  
BIV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.5  "C[C@]12CCC/C(=C\C=C/3\C[C@H](C[C@@H](C3=C)O)O)/[C@@H]1CC[C@@H]2C(CCCC(C)(C)O)CCCC(C)(C)O"  
BIV  SMILES            "OpenEye OEToolkits"  1.7.5  "CC12CCCC(=CC=C3CC(CC(C3=C)O)O)C1CCC2C(CCCC(C)(C)O)CCCC(C)(C)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BIV  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1R,3S,5Z)-5-[(2E)-2-{(1R,3aS,7aR)-1-[5-hydroxy-1-(4-hydroxy-4-methylpentyl)-5-methylhexyl]-7a-methyloctahydro-4H-inden-4-ylidene}ethylidene]-4-methylidenecyclohexane-1,3-diol (non-preferred name)"  
BIV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-(2,10-dihydroxy-2,10-dimethyl-undecan-6-yl)-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BIV  "Create component"    2006-06-20  RCSB  
BIV  "Modify descriptor"   2011-06-04  RCSB  
BIV  "Modify descriptor"   2012-01-05  RCSB  
BIV  "Modify coordinates"  2012-01-05  RCSB  
BIV  "Modify synonyms"     2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     BIV
_pdbx_chem_comp_synonyms.name        GEMINI
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
