data_8SV
# 
_chem_comp.id                                    8SV 
_chem_comp.name                                  "1,3-dimethyl-5-(methylamino)-6-nitro-1,3-dihydro-2H-benzimidazol-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H12 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-03 
_chem_comp.pdbx_modified_date                    2017-03-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        236.227 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8SV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5PO7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8SV N1  N1  N 0  1 N N N -4.251  12.975 -2.187 2.619  -1.594 0.087  N1  8SV 1  
8SV N3  N2  N 0  1 N N N -8.904  11.885 0.596  -2.172 1.182  -0.052 N3  8SV 2  
8SV C4  C1  C 0  1 Y N N -6.911  11.300 -0.276 -0.946 -0.693 0.025  C4  8SV 3  
8SV C5  C2  C 0  1 Y N N -7.810  12.358 -0.118 -0.862 0.701  -0.024 C5  8SV 4  
8SV C6  C3  C 0  1 Y N N -7.530  13.604 -0.639 0.378  1.320  -0.036 C6  8SV 5  
8SV C7  C4  C 0  1 Y N N -6.349  13.801 -1.306 1.529  0.559  0.001  C7  8SV 6  
8SV C8  C5  C 0  1 N N N -10.081 12.639 0.993  -2.566 2.592  -0.111 C8  8SV 7  
8SV C10 C6  C 0  1 N N N -6.871  8.872  0.442  -2.861 -2.368 0.075  C10 8SV 8  
8SV C1  C7  C 0  1 N N N -3.341  11.919 -2.544 2.541  -3.055 0.007  C1  8SV 9  
8SV C2  C8  C 0  1 Y N N -5.430  12.742 -1.476 1.449  -0.828 0.050  C2  8SV 10 
8SV C3  C9  C 0  1 Y N N -5.724  11.496 -0.961 0.211  -1.454 0.062  C3  8SV 11 
8SV N2  N3  N 1  1 N N N -6.060  15.134 -1.832 2.853  1.221  -0.012 N2  8SV 12 
8SV O1  O1  O -1 1 N N N -6.922  15.999 -1.791 3.017  2.266  0.593  O1  8SV 13 
8SV O2  O2  O 0  1 N N N -4.954  15.379 -2.292 3.778  0.722  -0.627 O2  8SV 14 
8SV C9  C10 C 0  1 N N N -8.688  10.557 0.888  -3.010 0.129  -0.022 C9  8SV 15 
8SV N4  N4  N 0  1 N N N -7.476  10.192 0.346  -2.302 -1.014 0.030  N4  8SV 16 
8SV O3  O3  O 0  1 N N N -9.449  9.833  1.512  -4.225 0.200  -0.038 O3  8SV 17 
8SV H1  H1  H 0  1 N N N -3.722  13.625 -1.641 3.482  -1.159 0.170  H1  8SV 18 
8SV H2  H2  H 0  1 N N N -8.233  14.415 -0.523 0.443  2.398  -0.074 H2  8SV 19 
8SV H3  H3  H 0  1 N N N -10.768 11.982 1.547  -3.654 2.664  -0.126 H3  8SV 20 
8SV H4  H4  H 0  1 N N N -9.779  13.479 1.636  -2.180 3.114  0.765  H4  8SV 21 
8SV H5  H5  H 0  1 N N N -10.587 13.027 0.097  -2.159 3.046  -1.014 H5  8SV 22 
8SV H6  H6  H 0  1 N N N -7.547  8.197  0.988  -3.004 -2.667 1.113  H6  8SV 23 
8SV H7  H7  H 0  1 N N N -6.695  8.475  -0.569 -3.820 -2.382 -0.443 H7  8SV 24 
8SV H8  H8  H 0  1 N N N -5.914  8.946  0.979  -2.174 -3.061 -0.412 H8  8SV 25 
8SV H9  H9  H 0  1 N N N -2.489  12.340 -3.097 1.952  -3.434 0.842  H9  8SV 26 
8SV H10 H10 H 0  1 N N N -2.977  11.424 -1.631 2.067  -3.343 -0.932 H10 8SV 27 
8SV H11 H11 H 0  1 N N N -3.862  11.185 -3.176 3.546  -3.476 0.051  H11 8SV 28 
8SV H12 H12 H 0  1 N N N -5.031  10.678 -1.092 0.149  -2.532 0.100  H12 8SV 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8SV C1  N1  SING N N 1  
8SV O2  N2  DOUB N N 2  
8SV N1  C2  SING N N 3  
8SV N2  O1  SING N N 4  
8SV N2  C7  SING N N 5  
8SV C2  C7  DOUB Y N 6  
8SV C2  C3  SING Y N 7  
8SV C7  C6  SING Y N 8  
8SV C3  C4  DOUB Y N 9  
8SV C6  C5  DOUB Y N 10 
8SV C4  C5  SING Y N 11 
8SV C4  N4  SING N N 12 
8SV C5  N3  SING N N 13 
8SV N4  C10 SING N N 14 
8SV N4  C9  SING N N 15 
8SV N3  C9  SING N N 16 
8SV N3  C8  SING N N 17 
8SV C9  O3  DOUB N N 18 
8SV N1  H1  SING N N 19 
8SV C6  H2  SING N N 20 
8SV C8  H3  SING N N 21 
8SV C8  H4  SING N N 22 
8SV C8  H5  SING N N 23 
8SV C10 H6  SING N N 24 
8SV C10 H7  SING N N 25 
8SV C10 H8  SING N N 26 
8SV C1  H9  SING N N 27 
8SV C1  H10 SING N N 28 
8SV C1  H11 SING N N 29 
8SV C3  H12 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8SV SMILES           ACDLabs              12.01 "N(c2c(cc1N(C(=O)N(c1c2)C)C)[N+]([O-])=O)C"                                         
8SV InChI            InChI                1.03  "InChI=1S/C10H12N4O3/c1-11-6-4-8-9(5-7(6)14(16)17)13(3)10(15)12(8)2/h4-5,11H,1-3H3" 
8SV InChIKey         InChI                1.03  VKEVNWDJJFOSCD-UHFFFAOYSA-N                                                         
8SV SMILES_CANONICAL CACTVS               3.385 "CNc1cc2N(C)C(=O)N(C)c2cc1[N+]([O-])=O"                                             
8SV SMILES           CACTVS               3.385 "CNc1cc2N(C)C(=O)N(C)c2cc1[N+]([O-])=O"                                             
8SV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CNc1cc2c(cc1[N+](=O)[O-])N(C(=O)N2C)C"                                             
8SV SMILES           "OpenEye OEToolkits" 2.0.6 "CNc1cc2c(cc1[N+](=O)[O-])N(C(=O)N2C)C"                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8SV "SYSTEMATIC NAME" ACDLabs              12.01 "1,3-dimethyl-5-(methylamino)-6-nitro-1,3-dihydro-2H-benzimidazol-2-one" 
8SV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1,3-dimethyl-5-(methylamino)-6-nitro-benzimidazol-2-one"                
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8SV "Create component" 2017-03-03 RCSB 
8SV "Initial release"  2017-03-15 RCSB 
# 
