data_5VV
# 
_chem_comp.id                                    5VV 
_chem_comp.name                                  N-carbamoyl-L-Asparagine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H8 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ASN 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        176.127 
_chem_comp.one_letter_code                       N 
_chem_comp.three_letter_code                     5VV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FAX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5VV N   N   N 0 1 N N N Y Y N -13.169 -15.839 37.745 0.537  -0.615 0.526  N   5VV 1  
5VV C9  C9  C 0 1 N N N N N N -12.164 -16.596 38.206 1.525  -1.336 -0.040 C9  5VV 2  
5VV O10 O10 O 0 1 N N N N N N -11.750 -16.516 39.403 2.061  -2.379 0.622  O10 5VV 3  
5VV O11 O11 O 0 1 N N N N N N -11.598 -17.419 37.432 1.932  -1.045 -1.147 O11 5VV 4  
5VV CA  CA  C 0 1 N N S N Y N -13.759 -14.659 38.472 -0.046 0.520  -0.193 CA  5VV 5  
5VV CB  CB  C 0 1 N N N N N N -14.905 -14.062 37.676 -1.469 0.767  0.311  CB  5VV 6  
5VV CG  CG  C 0 1 N N N N N N -14.637 -13.088 36.518 -2.338 -0.415 -0.037 CG  5VV 7  
5VV ND2 ND2 N 0 1 N N N N N N -15.793 -12.656 35.775 -3.640 -0.420 0.311  ND2 5VV 8  
5VV OD1 OD1 O 0 1 N N N N N N -13.342 -12.620 36.225 -1.865 -1.361 -0.630 OD1 5VV 9  
5VV C   C   C 0 1 N N N N Y Y -14.332 -15.043 39.846 0.792  1.750  0.045  C   5VV 10 
5VV O   O   O 0 1 N N N N Y Y -14.082 -14.276 40.783 1.775  1.685  0.745  O   5VV 11 
5VV H   H1  H 0 1 N N N Y Y N -13.556 -16.075 36.853 0.209  -0.850 1.409  H   5VV 12 
5VV H10 H2  H 0 1 N N N N N N -11.035 -17.128 39.533 2.767  -2.866 0.175  H10 5VV 13 
5VV HA  H3  H 0 1 N N N N Y N -12.981 -13.894 38.613 -0.072 0.299  -1.260 HA  5VV 14 
5VV H4  H4  H 0 1 N N N N N N -15.541 -13.526 38.396 -1.453 0.900  1.393  H4  5VV 15 
5VV H5  H5  H 0 1 N N N N N N -15.465 -14.908 37.251 -1.871 1.664  -0.159 H5  5VV 16 
5VV H6  H6  H 0 1 N N N N N N -15.690 -12.003 35.024 -4.018 0.337  0.785  H6  5VV 17 
5VV H7  H7  H 0 1 N N N N N N -16.699 -13.009 36.010 -4.199 -1.181 0.086  H7  5VV 18 
5VV OXT OXT O 0 1 N Y N N Y Y ?       ?       ?      0.445  2.917  -0.519 O1  5VV 19 
5VV HXT HXT H 0 1 N Y N N Y Y ?       ?       ?      1.014  3.678  -0.337 H1  5VV 20 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5VV ND2 CG  SING N N 1  
5VV OD1 CG  DOUB N N 2  
5VV CG  CB  SING N N 3  
5VV O11 C9  DOUB N N 4  
5VV CB  CA  SING N N 5  
5VV N   C9  SING N N 6  
5VV N   CA  SING N N 7  
5VV C9  O10 SING N N 8  
5VV CA  C   SING N N 9  
5VV C   O   DOUB N N 10 
5VV N   H   SING N N 11 
5VV O10 H10 SING N N 12 
5VV CA  HA  SING N N 13 
5VV CB  H4  SING N N 14 
5VV CB  H5  SING N N 15 
5VV ND2 H6  SING N N 16 
5VV ND2 H7  SING N N 17 
5VV C   OXT SING N N 18 
5VV OXT HXT SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5VV InChI            InChI                1.06  "InChI=1S/C5H8N2O5/c6-3(8)1-2(4(9)10)7-5(11)12/h2,7H,1H2,(H2,6,8)(H,9,10)(H,11,12)/t2-/m0/s1" 
5VV InChIKey         InChI                1.06  ZDDDMWAFNPCPER-REOHCLBHSA-N                                                                   
5VV SMILES_CANONICAL CACTVS               3.385 "NC(=O)C[C@H](NC(O)=O)C(O)=O"                                                                 
5VV SMILES           CACTVS               3.385 "NC(=O)C[CH](NC(O)=O)C(O)=O"                                                                  
5VV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H](C(=O)O)NC(=O)O)C(=O)N"                                                              
5VV SMILES           "OpenEye OEToolkits" 2.0.7 "C(C(C(=O)O)NC(=O)O)C(=O)N"                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           5VV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-4-azanyl-2-(carboxyamino)-4-oxidanylidene-butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5VV "Create component"   2015-12-14 EBI  
5VV "Initial release"    2016-05-18 RCSB 
5VV "Other modification" 2019-09-04 EBI  
5VV "Modify backbone"    2023-11-03 PDBE 
5VV "Other modification" 2024-06-28 PDBE 
5VV "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            5VV 
_pdbx_chem_comp_pcm.modified_residue_id                ASN 
_pdbx_chem_comp_pcm.type                               Carboxylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               N-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
