data_55V
#

_chem_comp.id                                   55V
_chem_comp.name                                 "6-methyl-5-[3-methyl-3-(3,4,5-trimethoxyphenyl)but-1-yn-1-yl]pyrimidine-2,4-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H24 N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2,4-Diamino-5-[3-(3,4,5-trimethoxyphenyl)pent-1-ynyl]-6-methylpyrimidine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-01-13
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       356.419
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    55V
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3FQC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
55V  C1P   C1P   C  0  1  N  N  N  -31.907  20.577   7.642  -1.702  -2.533  -2.509  C1P   55V   1  
55V  O1O   O1O   O  0  1  N  N  N  -32.662  19.777   8.610  -2.745  -2.258  -1.571  O1O   55V   2  
55V  C1N   C1N   C  0  1  Y  N  N  -31.908  18.954   9.411  -2.685  -1.070  -0.912  C1N   55V   3  
55V  C1M   C1M   C  0  1  Y  N  N  -30.519  18.867   9.240  -1.648  -0.186  -1.167  C1M   55V   4  
55V  C1Q   C1Q   C  0  1  Y  N  N  -32.545  18.196  10.409  -3.666  -0.738   0.015  C1Q   55V   5  
55V  O1V   O1V   O  0  1  N  N  N  -33.926  18.234  10.577  -4.688  -1.601   0.265  O1V   55V   6  
55V  C1W   C1W   C  0  1  N  N  N  -34.458  19.342  11.334  -4.489  -2.559   1.306  C1W   55V   7  
55V  C1R   C1R   C  0  1  Y  N  N  -31.776  17.359  11.222  -3.600   0.477   0.686  C1R   55V   8  
55V  O1T   O1T   O  0  1  N  N  N  -32.396  16.620  12.186  -4.558   0.806   1.594  O1T   55V   9  
55V  C1U   C1U   C  0  1  N  N  N  -31.575  15.602  12.783  -4.427   2.071   2.246  C1U   55V  10  
55V  C1S   C1S   C  0  1  Y  N  N  -30.389  17.289  11.041  -2.557   1.353   0.429  C1S   55V  11  
55V  C1L   C1L   C  0  1  Y  N  N  -29.751  18.034  10.051  -1.586   1.022  -0.497  C1L   55V  12  
55V  C1J   C1J   C  0  1  N  N  N  -28.216  17.942   9.874  -0.457   1.980  -0.778  C1J   55V  13  
55V  C1K   C1K   C  0  1  N  N  N  -27.847  17.797   8.384  -0.480   2.376  -2.256  C1K   55V  14  
55V  C1X   C1X   C  0  1  N  N  N  -27.582  19.188  10.482  -0.622   3.230   0.088  C1X   55V  15  
55V  C1I   C1I   C  0  1  N  N  N  -27.643  16.710  10.454   0.826   1.331  -0.463  C1I   55V  16  
55V  C1H   C1H   C  0  1  N  N  N  -27.221  15.626  10.868   1.850   0.814  -0.213  C1H   55V  17  
55V  C5    C5    C  0  1  Y  N  N  -26.829  14.299  11.260   3.099   0.183   0.093  C5    55V  18  
55V  C4    C4    C  0  1  Y  N  N  -27.473  13.212  10.660   3.142  -1.128   0.568  C4    55V  19  
55V  C1Y   C1Y   C  0  1  N  N  N  -28.576  13.404   9.608   1.869  -1.910   0.768  C1Y   55V  20  
55V  N3    N3    N  0  1  Y  N  N  -27.118  11.964  11.000   4.315  -1.676   0.839  N3    55V  21  
55V  C2    C2    C  0  1  Y  N  N  -26.170  11.744  11.911   5.442  -1.000   0.668  C2    55V  22  
55V  N1Z   N1Z   N  0  1  N  N  N  -25.840  10.501  12.231   6.645  -1.615   0.965  N1Z   55V  23  
55V  N1    N1    N  0  1  Y  N  N  -25.541  12.772  12.494   5.451   0.246   0.219  N1    55V  24  
55V  C6    C6    C  0  1  Y  N  N  -25.832  14.041  12.200   4.318   0.868  -0.082  C6    55V  25  
55V  N1G   N1G   N  0  1  N  N  N  -25.151  14.993  12.829   4.333   2.168  -0.556  N1G   55V  26  
55V  H1P   H1P   H  0  1  N  N  N  -31.718  21.577   8.060  -1.701  -1.767  -3.285  H1P   55V  27  
55V  H1PA  H1PA  H  0  0  N  N  N  -30.948  20.083   7.426  -0.741  -2.531  -1.995  H1PA  55V  28  
55V  H1PB  H1PB  H  0  0  N  N  N  -32.488  20.672   6.713  -1.870  -3.509  -2.963  H1PB  55V  29  
55V  H1M   H1M   H  0  1  N  N  N  -30.039  19.453   8.470  -0.887  -0.441  -1.890  H1M   55V  30  
55V  H1W   H1W   H  0  1  N  N  N  -34.593  19.039  12.383  -5.378  -3.183   1.401  H1W   55V  31  
55V  H1WA  H1WA  H  0  0  N  N  N  -33.758  20.189  11.285  -3.630  -3.185   1.065  H1WA  55V  32  
55V  H1WB  H1WB  H  0  0  N  N  N  -35.428  19.642  10.911  -4.308  -2.040   2.247  H1WB  55V  33  
55V  H1U   H1U   H  0  1  N  N  N  -31.365  14.817  12.041  -5.253   2.208   2.943  H1U   55V  34  
55V  H1UA  H1UA  H  0  0  N  N  N  -30.628  16.047  13.123  -3.483   2.102   2.791  H1UA  55V  35  
55V  H1UB  H1UB  H  0  0  N  N  N  -32.103  15.162  13.642  -4.443   2.866   1.501  H1UB  55V  36  
55V  H1S   H1S   H  0  1  N  N  N  -29.803  16.646  11.681  -2.505   2.297   0.950  H1S   55V  37  
55V  H1K   H1K   H  0  1  N  N  N  -28.766  17.762   7.780  -1.430   2.856  -2.489  H1K   55V  38  
55V  H1KA  H1KA  H  0  0  N  N  N  -27.236  18.657   8.072   0.337   3.069  -2.459  H1KA  55V  39  
55V  H1KB  H1KB  H  0  0  N  N  N  -27.276  16.868   8.237  -0.362   1.485  -2.872  H1KB  55V  40  
55V  H1X   H1X   H  0  1  N  N  N  -27.429  19.033  11.560  -0.606   2.948   1.141  H1X   55V  41  
55V  H1XA  H1XA  H  0  0  N  N  N  -26.613  19.379   9.998   0.194   3.923  -0.115  H1XA  55V  42  
55V  H1XB  H1XB  H  0  0  N  N  N  -28.247  20.051  10.326  -1.573   3.711  -0.145  H1XB  55V  43  
55V  H1Y   H1Y   H  0  1  N  N  N  -29.555  13.450  10.107   1.623  -2.445  -0.149  H1Y   55V  44  
55V  H1YA  H1YA  H  0  0  N  N  N  -28.400  14.341   9.059   2.005  -2.623   1.581  H1YA  55V  45  
55V  H1YB  H1YB  H  0  0  N  N  N  -28.562  12.558   8.904   1.058  -1.225   1.017  H1YB  55V  46  
55V  HN1Z  HN1Z  H  0  0  N  N  N  -25.757   9.953  11.399   6.654  -2.528   1.294  HN1Z  55V  47  
55V  HN1A  HN1A  H  0  0  N  N  N  -24.966  10.503  12.717   7.478  -1.134   0.845  HN1A  55V  48  
55V  HN1G  HN1G  H  0  0  N  N  N  -24.980  14.713  13.773   3.500   2.615  -0.770  HN1G  55V  49  
55V  HN1B  HN1B  H  0  0  N  N  N  -24.279  15.142  12.363   5.177   2.631  -0.673  HN1B  55V  50  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
55V  C1P  O1O   SING  N  N   1  
55V  C1P  H1P   SING  N  N   2  
55V  C1P  H1PA  SING  N  N   3  
55V  C1P  H1PB  SING  N  N   4  
55V  O1O  C1N   SING  N  N   5  
55V  C1M  C1N   DOUB  Y  N   6  
55V  C1N  C1Q   SING  Y  N   7  
55V  C1M  C1L   SING  Y  N   8  
55V  C1M  H1M   SING  N  N   9  
55V  C1Q  O1V   SING  N  N  10  
55V  C1Q  C1R   DOUB  Y  N  11  
55V  O1V  C1W   SING  N  N  12  
55V  C1W  H1W   SING  N  N  13  
55V  C1W  H1WA  SING  N  N  14  
55V  C1W  H1WB  SING  N  N  15  
55V  C1S  C1R   SING  Y  N  16  
55V  C1R  O1T   SING  N  N  17  
55V  O1T  C1U   SING  N  N  18  
55V  C1U  H1U   SING  N  N  19  
55V  C1U  H1UA  SING  N  N  20  
55V  C1U  H1UB  SING  N  N  21  
55V  C1L  C1S   DOUB  Y  N  22  
55V  C1S  H1S   SING  N  N  23  
55V  C1J  C1L   SING  N  N  24  
55V  C1K  C1J   SING  N  N  25  
55V  C1J  C1I   SING  N  N  26  
55V  C1J  C1X   SING  N  N  27  
55V  C1K  H1K   SING  N  N  28  
55V  C1K  H1KA  SING  N  N  29  
55V  C1K  H1KB  SING  N  N  30  
55V  C1X  H1X   SING  N  N  31  
55V  C1X  H1XA  SING  N  N  32  
55V  C1X  H1XB  SING  N  N  33  
55V  C1I  C1H   TRIP  N  N  34  
55V  C1H  C5    SING  N  N  35  
55V  C4   C5    DOUB  Y  N  36  
55V  C5   C6    SING  Y  N  37  
55V  C1Y  C4    SING  N  N  38  
55V  C4   N3    SING  Y  N  39  
55V  C1Y  H1Y   SING  N  N  40  
55V  C1Y  H1YA  SING  N  N  41  
55V  C1Y  H1YB  SING  N  N  42  
55V  N3   C2    DOUB  Y  N  43  
55V  C2   N1Z   SING  N  N  44  
55V  C2   N1    SING  Y  N  45  
55V  N1Z  HN1Z  SING  N  N  46  
55V  N1Z  HN1A  SING  N  N  47  
55V  C6   N1    DOUB  Y  N  48  
55V  C6   N1G   SING  N  N  49  
55V  N1G  HN1G  SING  N  N  50  
55V  N1G  HN1B  SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
55V  SMILES            ACDLabs               10.04  "C(#CC(c1cc(OC)c(OC)c(OC)c1)(C)C)c2c(nc(nc2C)N)N"  
55V  SMILES_CANONICAL  CACTVS                3.341  "COc1cc(cc(OC)c1OC)C(C)(C)C#Cc2c(C)nc(N)nc2N"  
55V  SMILES            CACTVS                3.341  "COc1cc(cc(OC)c1OC)C(C)(C)C#Cc2c(C)nc(N)nc2N"  
55V  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cc1c(c(nc(n1)N)N)C#CC(C)(C)c2cc(c(c(c2)OC)OC)OC"  
55V  SMILES            "OpenEye OEToolkits"  1.5.0  "Cc1c(c(nc(n1)N)N)C#CC(C)(C)c2cc(c(c(c2)OC)OC)OC"  
55V  InChI             InChI                 1.03   "InChI=1S/C19H24N4O3/c1-11-13(17(20)23-18(21)22-11)7-8-19(2,3)12-9-14(24-4)16(26-6)15(10-12)25-5/h9-10H,1-6H3,(H4,20,21,22,23)"  
55V  InChIKey          InChI                 1.03   FJNFXXGWYVMQNA-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
55V  "SYSTEMATIC NAME"  ACDLabs               10.04  "6-methyl-5-[3-methyl-3-(3,4,5-trimethoxyphenyl)but-1-yn-1-yl]pyrimidine-2,4-diamine"  
55V  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "6-methyl-5-[3-methyl-3-(3,4,5-trimethoxyphenyl)but-1-ynyl]pyrimidine-2,4-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
55V  "Create component"      2009-01-13  RCSB  
55V  "Modify aromatic_flag"  2011-06-04  RCSB  
55V  "Modify descriptor"     2011-06-04  RCSB  
55V  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     55V
_pdbx_chem_comp_synonyms.name        "2,4-Diamino-5-[3-(3,4,5-trimethoxyphenyl)pent-1-ynyl]-6-methylpyrimidine"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
