data_2NV
#

_chem_comp.id                                   2NV
_chem_comp.name                                 "3,6,9,12,15-pentaoxaoctadecan-17-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H29 N O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Jeffamine ED-2001"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-04-21
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       279.373
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2NV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5LU3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2NV  N1    N1    N  0  1  N  N  N  -23.717  -29.985  -3.417   5.632  -1.581  -0.813  N1    2NV   1  
2NV  C2    C2    C  0  1  N  N  R  -22.389  -30.312  -2.931   6.370  -0.664   0.066  C2    2NV   2  
2NV  C3    C3    C  0  1  N  N  N  -21.472  -29.206  -3.448   5.417  -0.083   1.112  C3    2NV   3  
2NV  O4    O4    O  0  1  N  N  N  -20.142  -29.609  -3.561   4.433   0.725   0.463  O4    2NV   4  
2NV  C5    C5    C  0  1  N  N  N  -19.185  -28.560  -3.677   3.488   1.319   1.356  C5    2NV   5  
2NV  C6    C6    C  0  1  N  N  N  -19.138  -27.715  -2.392   2.489   2.158   0.556  C6    2NV   6  
2NV  O7    O7    O  0  1  N  N  N  -18.342  -26.595  -2.620   1.721   1.302  -0.293  O7    2NV   7  
2NV  C8    C8    C  0  1  N  N  N  -18.269  -25.699  -1.544   0.752   1.989  -1.087  C8    2NV   8  
2NV  C9    C9    C  0  1  N  N  N  -17.239  -26.241  -0.599  -0.006   0.980  -1.952  C9    2NV   9  
2NV  O10   O10   O  0  1  N  N  N  -15.974  -26.065  -1.107  -0.760   0.104  -1.112  O10   2NV  10  
2NV  C11   C11   C  0  1  N  N  N  -15.004  -25.943  -0.070  -1.509  -0.882  -1.824  C11   2NV  11  
2NV  C12   C12   C  0  1  N  N  N  -14.790  -27.341   0.456  -2.272  -1.759  -0.829  C12   2NV  12  
2NV  O13   O13   O  0  1  N  N  N  -14.050  -27.473   1.620  -3.245  -0.967  -0.144  O13   2NV  13  
2NV  C14   C14   C  0  1  N  N  N  -14.075  -28.780   2.189  -4.017  -1.694   0.814  C14   2NV  14  
2NV  C15   C15   C  0  1  N  N  N  -15.433  -28.969   2.859  -5.020  -0.752   1.482  C15   2NV  15  
2NV  O16   O16   O  0  1  N  N  N  -15.605  -30.207   3.515  -5.960  -0.290   0.510  O16   2NV  16  
2NV  C17   C17   C  0  1  N  N  N  -16.865  -30.377   4.127  -6.947   0.601   1.034  C17   2NV  17  
2NV  C18   C18   C  0  1  N  N  N  -16.848  -29.826   5.560  -7.895   1.029  -0.089  C18   2NV  18  
2NV  C2A   C2A   C  0  1  N  N  N  -22.490  -30.335  -1.397   7.495  -1.427   0.769  C2A   2NV  19  
2NV  HN1   HN1   H  0  1  N  N  N  -24.366  -30.680  -3.107   6.225  -1.929  -1.552  HN1   2NV  20  
2NV  HN1A  HN1A  H  0  0  N  N  N  -23.991  -29.091  -3.062   5.228  -2.341  -0.286  HN1A  2NV  21  
2NV  H2    H2    H  0  1  N  N  N  -22.054  -31.291  -3.304   6.795   0.145  -0.527  H2    2NV  22  
2NV  H3    H3    H  0  1  N  N  N  -21.828  -28.891  -4.440   4.924  -0.896   1.647  H3    2NV  23  
2NV  H3A   H3A   H  0  1  N  N  N  -21.523  -28.355  -2.753   5.980   0.527   1.818  H3A   2NV  24  
2NV  H5    H5    H  0  1  N  N  N  -18.192  -28.997  -3.857   2.956   0.536   1.895  H5    2NV  25  
2NV  H5A   H5A   H  0  1  N  N  N  -19.460  -27.913  -4.523   4.012   1.958   2.067  H5A   2NV  26  
2NV  H6    H6    H  0  1  N  N  N  -20.156  -27.396  -2.122   1.823   2.681   1.242  H6    2NV  27  
2NV  H6A   H6A   H  0  1  N  N  N  -18.711  -28.312  -1.573   3.028   2.884  -0.052  H6A   2NV  28  
2NV  H8    H8    H  0  1  N  N  N  -17.969  -24.703  -1.900   0.051   2.509  -0.435  H8    2NV  29  
2NV  H8A   H8A   H  0  1  N  N  N  -19.245  -25.630  -1.042   1.256   2.712  -1.730  H8A   2NV  30  
2NV  H9    H9    H  0  1  N  N  N  -17.318  -25.714   0.363  -0.682   1.512  -2.622  H9    2NV  31  
2NV  H9A   H9A   H  0  1  N  N  N  -17.420  -27.315  -0.445   0.704   0.399  -2.539  H9A   2NV  32  
2NV  H11   H11   H  0  1  N  N  N  -14.064  -25.536  -0.470  -2.217  -0.390  -2.491  H11   2NV  33  
2NV  H11A  H11A  H  0  0  N  N  N  -15.377  -25.286   0.729  -0.830  -1.503  -2.408  H11A  2NV  34  
2NV  H12   H12   H  0  1  N  N  N  -15.781  -27.780   0.642  -2.773  -2.566  -1.365  H12   2NV  35  
2NV  H12A  H12A  H  0  0  N  N  N  -14.277  -27.915  -0.329  -1.574  -2.182  -0.107  H12A  2NV  36  
2NV  H14   H14   H  0  1  N  N  N  -13.938  -29.535   1.400  -4.554  -2.500   0.312  H14   2NV  37  
2NV  H14A  H14A  H  0  0  N  N  N  -13.272  -28.879   2.935  -3.355  -2.116   1.570  H14A  2NV  38  
2NV  H15   H15   H  0  1  N  N  N  -15.562  -28.168   3.602  -5.547  -1.284   2.274  H15   2NV  39  
2NV  H15A  H15A  H  0  0  N  N  N  -16.211  -28.881   2.086  -4.490   0.100   1.908  H15A  2NV  40  
2NV  H17   H17   H  0  1  N  N  N  -17.626  -29.840   3.542  -7.514   0.097   1.816  H17   2NV  41  
2NV  H17A  H17A  H  0  0  N  N  N  -17.112  -31.449   4.155  -6.457   1.481   1.450  H17A  2NV  42  
2NV  H18   H18   H  0  1  N  N  N  -17.837  -29.967   6.020  -7.327   1.533  -0.871  H18   2NV  43  
2NV  H18A  H18A  H  0  0  N  N  N  -16.090  -30.362   6.150  -8.385   0.149  -0.505  H18A  2NV  44  
2NV  H18B  H18B  H  0  0  N  N  N  -16.604  -28.754   5.537  -8.647   1.709   0.310  H18B  2NV  45  
2NV  H2A   H2A   H  0  1  N  N  N  -21.507  -30.579  -0.968   8.174  -1.841   0.024  H2A   2NV  46  
2NV  H2AA  H2AA  H  0  0  N  N  N  -22.812  -29.347  -1.036   8.042  -0.747   1.422  H2AA  2NV  47  
2NV  H2AB  H2AB  H  0  0  N  N  N  -23.223  -31.095  -1.089   7.069  -2.236   1.363  H2AB  2NV  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2NV  N1   C2    SING  N  N   1  
2NV  N1   HN1   SING  N  N   2  
2NV  N1   HN1A  SING  N  N   3  
2NV  C3   C2    SING  N  N   4  
2NV  C2   C2A   SING  N  N   5  
2NV  C2   H2    SING  N  N   6  
2NV  O4   C3    SING  N  N   7  
2NV  C3   H3    SING  N  N   8  
2NV  C3   H3A   SING  N  N   9  
2NV  C5   O4    SING  N  N  10  
2NV  C5   C6    SING  N  N  11  
2NV  C5   H5    SING  N  N  12  
2NV  C5   H5A   SING  N  N  13  
2NV  O7   C6    SING  N  N  14  
2NV  C6   H6    SING  N  N  15  
2NV  C6   H6A   SING  N  N  16  
2NV  O7   C8    SING  N  N  17  
2NV  C8   C9    SING  N  N  18  
2NV  C8   H8    SING  N  N  19  
2NV  C8   H8A   SING  N  N  20  
2NV  O10  C9    SING  N  N  21  
2NV  C9   H9    SING  N  N  22  
2NV  C9   H9A   SING  N  N  23  
2NV  O10  C11   SING  N  N  24  
2NV  C11  C12   SING  N  N  25  
2NV  C11  H11   SING  N  N  26  
2NV  C11  H11A  SING  N  N  27  
2NV  C12  O13   SING  N  N  28  
2NV  C12  H12   SING  N  N  29  
2NV  C12  H12A  SING  N  N  30  
2NV  O13  C14   SING  N  N  31  
2NV  C14  C15   SING  N  N  32  
2NV  C14  H14   SING  N  N  33  
2NV  C14  H14A  SING  N  N  34  
2NV  C15  O16   SING  N  N  35  
2NV  C15  H15   SING  N  N  36  
2NV  C15  H15A  SING  N  N  37  
2NV  O16  C17   SING  N  N  38  
2NV  C17  C18   SING  N  N  39  
2NV  C17  H17   SING  N  N  40  
2NV  C17  H17A  SING  N  N  41  
2NV  C18  H18   SING  N  N  42  
2NV  C18  H18A  SING  N  N  43  
2NV  C18  H18B  SING  N  N  44  
2NV  C2A  H2A   SING  N  N  45  
2NV  C2A  H2AA  SING  N  N  46  
2NV  C2A  H2AB  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2NV  SMILES            ACDLabs               12.01  "NC(C)COCCOCCOCCOCCOCC"  
2NV  InChI             InChI                 1.03   "InChI=1S/C13H29NO5/c1-3-15-4-5-16-6-7-17-8-9-18-10-11-19-12-13(2)14/h13H,3-12,14H2,1-2H3/t13-/m1/s1"  
2NV  InChIKey          InChI                 1.03   LPPZTQZWMYYVLK-CYBMUJFWSA-N  
2NV  SMILES_CANONICAL  CACTVS                3.385  "CCOCCOCCOCCOCCOC[C@@H](C)N"  
2NV  SMILES            CACTVS                3.385  "CCOCCOCCOCCOCCOC[CH](C)N"  
2NV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CCOCCOCCOCCOCCOC[C@@H](C)N"  
2NV  SMILES            "OpenEye OEToolkits"  1.7.6  "CCOCCOCCOCCOCCOCC(C)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2NV  "SYSTEMATIC NAME"  ACDLabs               12.01  "(17R)-3,6,9,12,15-pentaoxaoctadecan-17-amine"  
2NV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R)-1-[2-[2-[2-(2-ethoxyethoxy)ethoxy]ethoxy]ethoxy]propan-2-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2NV  "Create component"    2014-04-21  RCSB  
2NV  "Initial release"     2014-04-30  RCSB  
2NV  "Modify descriptor"   2014-09-05  RCSB  
2NV  "Other modification"  2020-01-22  RCSB  
2NV  "Modify synonyms"     2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2NV
_pdbx_chem_comp_synonyms.name        "Jeffamine ED-2001"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
