data_X5U
# 
_chem_comp.id                                    X5U 
_chem_comp.name                                  "(S)-alpha-methyl-4-Iodophenylalanine" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H12 I N O2" 
_chem_comp.mon_nstd_parent_comp_id               PHE 
_chem_comp.pdbx_synonyms                         "(2S)-2-azanyl-3-(4-iodophenyl)-2-methyl-propanoic acid; 4-Iodo-alpha-methyl-L-phenylalanine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-23 
_chem_comp.pdbx_modified_date                    2024-11-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        305.112 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X5U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QWJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X5U CE2 C1  C 0 1 Y N N N N N 14.994 21.069 -4.289 0.703  1.267  0.065  CE2 X5U 1  
X5U CZ  C2  C 0 1 Y N N N N N 14.666 21.101 -5.631 1.367  0.090  -0.229 CZ  X5U 2  
X5U CE1 C3  C 0 1 Y N N N N N 13.889 22.122 -6.139 0.672  -0.982 -0.760 CE1 X5U 3  
X5U CD1 C4  C 0 1 Y N N N N N 13.434 23.111 -5.284 -0.686 -0.876 -0.996 CD1 X5U 4  
X5U CG  C5  C 0 1 Y N N N N N 13.739 23.098 -3.931 -1.349 0.301  -0.702 CG  X5U 5  
X5U CD2 C6  C 0 1 Y N N N N N 14.534 22.070 -3.450 -0.655 1.372  -0.172 CD2 X5U 6  
X5U N   N1  N 0 1 N N N Y Y N 11.608 25.264 -1.579 -3.176 -1.384 0.664  N   X5U 7  
X5U CA  C7  C 0 1 N N S Y N N 11.928 23.977 -2.263 -3.601 -0.031 0.284  CA  X5U 8  
X5U C   C8  C 0 1 N N N Y N Y 12.032 22.896 -1.163 -5.078 -0.033 -0.014 C   X5U 9  
X5U O   O1  O 0 1 N N N Y N Y 13.037 22.924 -0.423 -5.519 0.680  -0.884 O   X5U 10 
X5U C1  C9  C 0 1 N N N N N N 10.840 23.609 -3.271 -3.314 0.936  1.435  C1  X5U 11 
X5U CB  C10 C 0 1 N N N N N N 13.265 24.203 -3.015 -2.830 0.415  -0.960 CB  X5U 12 
X5U I1  I1  I 0 1 N N N N N N 15.364 19.598 -6.921 3.425  -0.069 0.128  I1  X5U 13 
X5U HE2 H1  H 0 1 N N N N N N 15.605 20.269 -3.897 1.244  2.102  0.483  HE2 X5U 14 
X5U HE1 H2  H 0 1 N N N N N N 13.639 22.149 -7.189 1.190  -1.901 -0.990 HE1 X5U 15 
X5U HD1 H3  H 0 1 N N N N N N 12.827 23.912 -5.680 -1.229 -1.713 -1.411 HD1 X5U 16 
X5U HD2 H4  H 0 1 N N N N N N 14.799 22.049 -2.403 -1.175 2.289  0.062  HD2 X5U 17 
X5U H2  H5  H 0 1 N Y N Y Y N 12.332 25.484 -0.926 -3.623 -1.677 1.520  H2  X5U 18 
X5U H   H6  H 0 1 N N N Y Y N 11.539 25.994 -2.259 -3.354 -2.042 -0.080 H   X5U 19 
X5U H3  H9  H 0 1 N N N N N N 11.099 22.659 -3.760 -2.246 0.938  1.651  H3  X5U 20 
X5U H1  H10 H 0 1 N N N N N N 9.878  23.502 -2.749 -3.629 1.941  1.153  H1  X5U 21 
X5U HB1 H11 H 0 1 N N N N N N 10.760 24.402 -4.029 -3.863 0.618  2.322  HB1 X5U 22 
X5U HB2 H12 H 0 1 N N N N N N 13.152 25.112 -3.624 -3.079 1.451  -1.190 HB2 X5U 23 
X5U HB3 H13 H 0 1 N N N N N N 14.047 24.363 -2.258 -3.102 -0.220 -1.803 HB3 X5U 24 
X5U OXT O3  O 0 1 N Y N Y N Y 11.034 22.030 -1.026 -5.903 -0.826 0.687  OXT X5U 25 
X5U HXT H14 H 0 1 N Y N Y N Y 11.212 21.455 -0.291 -6.842 -0.793 0.460  HXT X5U 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X5U C1  CA  SING N N 1  
X5U CA  N   SING N N 2  
X5U CA  CB  SING N N 3  
X5U CB  CG  SING N N 4  
X5U CG  CD1 DOUB Y N 5  
X5U CD1 CE1 SING Y N 6  
X5U CE1 CZ  DOUB Y N 7  
X5U CZ  I1  SING N N 8  
X5U CZ  CE2 SING Y N 9  
X5U CE2 CD2 DOUB Y N 10 
X5U CA  C   SING N N 11 
X5U C   O   DOUB N N 12 
X5U CG  CD2 SING Y N 13 
X5U CE2 HE2 SING N N 14 
X5U CE1 HE1 SING N N 15 
X5U CD1 HD1 SING N N 16 
X5U CD2 HD2 SING N N 17 
X5U N   H2  SING N N 18 
X5U N   H   SING N N 19 
X5U C1  H3  SING N N 20 
X5U C1  H1  SING N N 21 
X5U C1  HB1 SING N N 22 
X5U CB  HB2 SING N N 23 
X5U CB  HB3 SING N N 24 
X5U C   OXT SING N N 25 
X5U OXT HXT SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X5U InChI            InChI                1.06  "InChI=1S/C10H12INO2/c1-10(12,9(13)14)6-7-2-4-8(11)5-3-7/h2-5H,6,12H2,1H3,(H,13,14)/t10-/m0/s1" 
X5U InChIKey         InChI                1.06  YNCJAZPOXKKAMD-JTQLQIEISA-N                                                                     
X5U SMILES_CANONICAL CACTVS               3.385 "C[C@](N)(Cc1ccc(I)cc1)C(O)=O"                                                                  
X5U SMILES           CACTVS               3.385 "C[C](N)(Cc1ccc(I)cc1)C(O)=O"                                                                   
X5U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@](Cc1ccc(cc1)I)(C(=O)O)N"                                                                  
X5U SMILES           "OpenEye OEToolkits" 2.0.7 "CC(Cc1ccc(cc1)I)(C(=O)O)N"                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           X5U 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-azanyl-3-(4-iodophenyl)-2-methyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 X5U "(2S)-2-azanyl-3-(4-iodophenyl)-2-methyl-propanoic acid" PDB     ? 
2 X5U 4-Iodo-alpha-methyl-L-phenylalanine                      PUBCHEM ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X5U "Create component"      2023-10-23 PDBE 
X5U "Other modification"    2023-10-26 PDBE 
X5U "Modify backbone"       2023-11-03 PDBE 
X5U "Modify parent residue" 2024-01-22 PDBE 
X5U "Modify PCM"            2024-09-27 PDBE 
X5U "Initial release"       2024-12-04 RCSB 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 X5U PHE Methylation "Named protein modification" "Amino-acid backbone"   "Any position" ? ? ? ? 
2 X5U PHE Iodination  "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
# 
