data_V6U
# 
_chem_comp.id                                    V6U 
_chem_comp.name                                  "methyl 2-[[3-(2-azanyl-6-chloranyl-pyrimidin-4-yl)-1-methyl-pyrazol-4-yl]methyl]benzoate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H16 Cl N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-23 
_chem_comp.pdbx_modified_date                    2023-04-21 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        357.794 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V6U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CNH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V6U C12  C1  C  0 1 Y N N -29.700 -1.027 1.239  -2.907 -0.163 0.379  C12  V6U 1  
V6U C13  C2  C  0 1 Y N N -28.890 0.197  0.983  -1.836 0.732  0.362  C13  V6U 2  
V6U C14  C3  C  0 1 Y N N -27.765 0.514  1.899  -1.393 1.294  1.541  C14  V6U 3  
V6U C15  C4  C  0 1 Y N N -27.457 -0.429 3.018  -2.007 0.972  2.739  C15  V6U 4  
V6U C16  C5  C  0 1 Y N N -28.266 -1.643 3.243  -3.068 0.085  2.762  C16  V6U 5  
V6U C17  C6  C  0 1 Y N N -29.393 -1.959 2.370  -3.522 -0.484 1.591  C17  V6U 6  
V6U C18  C7  C  0 1 N N N -33.126 4.019  1.369  1.808  5.082  -0.399 C18  V6U 7  
V6U C02  C8  C  0 1 Y N N -26.738 5.898  1.519  3.377  -1.627 -0.016 C02  V6U 8  
V6U C03  C9  C  0 1 Y N N -28.050 5.465  1.387  3.049  -0.297 -0.222 C03  V6U 9  
V6U C04  C10 C  0 1 Y N N -28.245 4.149  0.890  1.716  0.090  -0.075 C04  V6U 10 
V6U C06  C11 C  0 1 Y N N -25.819 3.898  0.704  1.164  -2.090 0.438  C06  V6U 11 
V6U C09  C12 C  0 1 Y N N -29.642 3.604  0.818  1.314  1.502  -0.285 C09  V6U 12 
V6U C10  C13 C  0 1 Y N N -30.077 2.337  0.427  0.036  1.952  -0.670 C10  V6U 13 
V6U C11  C14 C  0 1 Y N N -31.429 2.355  0.556  0.078  3.299  -0.752 C11  V6U 14 
V6U C21  C15 C  0 1 N N N -29.229 1.165  -0.121 -1.166 1.084  -0.941 C21  V6U 15 
V6U C22  C16 C  0 1 N N N -30.812 -1.454 0.348  -3.391 -0.764 -0.881 C22  V6U 16 
V6U C25  C17 C  0 1 N N N -32.131 -3.232 -0.545 -4.773 -2.260 -2.126 C25  V6U 17 
V6U N01  N1  N  0 1 Y N N -25.618 5.203  1.169  2.421  -2.487 0.306  N01  V6U 18 
V6U N05  N2  N  0 1 Y N N -27.134 3.380  0.575  0.809  -0.828 0.255  N05  V6U 19 
V6U N07  N3  N  0 1 Y N N -31.780 3.575  1.021  1.329  3.697  -0.434 N07  V6U 20 
V6U N08  N4  N  0 1 Y N N -30.658 4.337  1.208  2.088  2.557  -0.140 N08  V6U 21 
V6U N20  N5  N  0 1 N N N -24.661 3.156  0.404  0.196  -3.020 0.775  N20  V6U 22 
V6U O23  O1  O  0 1 N N N -31.004 -2.848 0.204  -4.346 -1.714 -0.851 O23  V6U 23 
V6U O24  O2  O  0 1 N N N -31.421 -0.661 -0.212 -2.928 -0.402 -1.944 O24  V6U 24 
V6U CL19 CL1 CL 0 0 N N N -26.524 7.554  2.034  5.019  -2.163 -0.185 CL19 V6U 25 
V6U H141 H1  H  0 0 N N N -27.179 1.410  1.759  -0.564 1.987  1.530  H141 V6U 26 
V6U H151 H2  H  0 0 N N N -26.626 -0.218 3.675  -1.655 1.414  3.659  H151 V6U 27 
V6U H161 H3  H  0 0 N N N -28.022 -2.304 4.061  -3.543 -0.163 3.701  H161 V6U 28 
V6U H171 H4  H  0 0 N N N -29.990 -2.843 2.536  -4.351 -1.176 1.611  H171 V6U 29 
V6U H182 H5  H  0 0 N N N -33.080 5.034  1.791  1.654  5.494  0.598  H182 V6U 30 
V6U H181 H6  H  0 0 N N N -33.755 4.026  0.466  2.871  5.105  -0.642 H181 V6U 31 
V6U H183 H7  H  0 0 N N N -33.558 3.332  2.112  1.256  5.676  -1.127 H183 V6U 32 
V6U H031 H8  H  0 0 N N N -28.884 6.099  1.650  3.808  0.424  -0.489 H031 V6U 33 
V6U H111 H9  H  0 0 N N N -32.102 1.542  0.328  -0.743 3.945  -1.024 H111 V6U 34 
V6U H212 H10 H  0 0 N N N -29.799 0.639  -0.901 -0.849 0.171  -1.444 H212 V6U 35 
V6U H211 H11 H  0 0 N N N -28.298 1.562  -0.552 -1.868 1.624  -1.576 H211 V6U 36 
V6U H253 H12 H  0 0 N N N -32.183 -4.330 -0.593 -5.176 -1.460 -2.747 H253 V6U 37 
V6U H252 H13 H  0 0 N N N -33.041 -2.842 -0.064 -3.921 -2.717 -2.630 H252 V6U 38 
V6U H251 H14 H  0 0 N N N -32.051 -2.824 -1.563 -5.544 -3.013 -1.960 H251 V6U 39 
V6U H201 H15 H  0 0 N N N -24.921 2.240  0.098  0.441  -3.948 0.912  H201 V6U 40 
V6U H202 H16 H  0 0 N N N -24.149 3.617  -0.321 -0.729 -2.743 0.875  H202 V6U 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V6U C25 O23  SING N N 1  
V6U O24 C22  DOUB N N 2  
V6U C21 C10  SING N N 3  
V6U C21 C13  SING N N 4  
V6U O23 C22  SING N N 5  
V6U C22 C12  SING N N 6  
V6U N20 C06  SING N N 7  
V6U C10 C11  DOUB Y N 8  
V6U C10 C09  SING Y N 9  
V6U C11 N07  SING Y N 10 
V6U N05 C06  DOUB Y N 11 
V6U N05 C04  SING Y N 12 
V6U C06 N01  SING Y N 13 
V6U C09 C04  SING N N 14 
V6U C09 N08  DOUB Y N 15 
V6U C04 C03  DOUB Y N 16 
V6U C13 C12  DOUB Y N 17 
V6U C13 C14  SING Y N 18 
V6U N07 N08  SING Y N 19 
V6U N07 C18  SING N N 20 
V6U N01 C02  DOUB Y N 21 
V6U C12 C17  SING Y N 22 
V6U C03 C02  SING Y N 23 
V6U C02 CL19 SING N N 24 
V6U C14 C15  DOUB Y N 25 
V6U C17 C16  DOUB Y N 26 
V6U C15 C16  SING Y N 27 
V6U C14 H141 SING N N 28 
V6U C15 H151 SING N N 29 
V6U C16 H161 SING N N 30 
V6U C17 H171 SING N N 31 
V6U C18 H182 SING N N 32 
V6U C18 H181 SING N N 33 
V6U C18 H183 SING N N 34 
V6U C03 H031 SING N N 35 
V6U C11 H111 SING N N 36 
V6U C21 H212 SING N N 37 
V6U C21 H211 SING N N 38 
V6U C25 H253 SING N N 39 
V6U C25 H252 SING N N 40 
V6U C25 H251 SING N N 41 
V6U N20 H201 SING N N 42 
V6U N20 H202 SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V6U InChI            InChI                1.06  "InChI=1S/C17H16ClN5O2/c1-23-9-11(7-10-5-3-4-6-12(10)16(24)25-2)15(22-23)13-8-14(18)21-17(19)20-13/h3-6,8-9H,7H2,1-2H3,(H2,19,20,21)" 
V6U InChIKey         InChI                1.06  FIUGGTKIGCZJJN-UHFFFAOYSA-N                                                                                                           
V6U SMILES_CANONICAL CACTVS               3.385 "COC(=O)c1ccccc1Cc2cn(C)nc2c3cc(Cl)nc(N)n3"                                                                                           
V6U SMILES           CACTVS               3.385 "COC(=O)c1ccccc1Cc2cn(C)nc2c3cc(Cl)nc(N)n3"                                                                                           
V6U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(c(n1)c2cc(nc(n2)N)Cl)Cc3ccccc3C(=O)OC"                                                                                         
V6U SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1cc(c(n1)c2cc(nc(n2)N)Cl)Cc3ccccc3C(=O)OC"                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           V6U 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "methyl 2-[[3-(2-azanyl-6-chloranyl-pyrimidin-4-yl)-1-methyl-pyrazol-4-yl]methyl]benzoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V6U "Create component" 2023-02-23 PDBE 
V6U "Initial release"  2023-04-26 RCSB 
# 
