data_UGU
# 
_chem_comp.id                                    UGU 
_chem_comp.name                                  "(Z)-7-[(1R,2R,3R,5S)-3,5-bis(oxidanyl)-2-[(E,3S)-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H34 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Dinoprost; Prostaglandin F2a; PGF2alpha" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-30 
_chem_comp.pdbx_modified_date                    2023-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        354.481 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UGU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IUK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UGU C2  C1  C 0 1 N N N N N N 116.382 96.321  76.205 3.876  -3.081 -0.029 C2  UGU 1  
UGU C3  C2  C 0 1 N N N N N N 115.992 97.183  77.402 4.423  -1.706 0.361  C3  UGU 2  
UGU C4  C3  C 0 1 N N N N N N 114.652 97.894  77.225 3.274  -0.816 0.837  C4  UGU 3  
UGU C5  C4  C 0 1 N N N N N N 114.754 99.329  77.728 3.813  0.538  1.222  C5  UGU 4  
UGU C6  C5  C 0 1 N N N N N N 114.020 99.776  78.724 3.283  1.622  0.713  C6  UGU 5  
UGU C7  C6  C 0 1 N N N N N N 113.006 98.850  79.383 2.030  1.530  -0.119 C7  UGU 6  
UGU C8  C7  C 0 1 N N R N N N 112.940 98.687  80.892 0.972  2.479  0.445  C8  UGU 7  
UGU C9  C8  C 0 1 N N S N N N 112.063 97.323  81.261 1.425  3.939  0.269  C9  UGU 8  
UGU O3  O1  O 0 1 N N N N N N 111.924 96.492  80.152 2.702  3.981  -0.370 O3  UGU 9  
UGU C12 C9  C 0 1 N N R N N N 114.138 98.556  81.494 -0.347 2.329  -0.342 C12 UGU 10 
UGU C11 C10 C 0 1 N N R N N N 113.743 97.734  82.798 -0.910 3.769  -0.419 C11 UGU 11 
UGU O4  O2  O 0 1 N N N N N N 114.858 96.987  83.151 -1.793 3.909  -1.533 O4  UGU 12 
UGU C10 C11 C 0 1 N N N N N N 112.620 96.711  82.336 0.366  4.625  -0.619 C10 UGU 13 
UGU C13 C12 C 0 1 N N N N N N 114.432 99.922  82.053 -1.302 1.427  0.397  C13 UGU 14 
UGU C14 C13 C 0 1 N N N N N N 113.416 100.476 82.649 -1.730 0.325  -0.166 C14 UGU 15 
UGU C15 C14 C 0 1 N N S N N N 113.677 101.821 83.250 -2.686 -0.576 0.573  C15 UGU 16 
UGU O5  O3  O 0 1 N N N N N N 114.270 101.455 84.473 -3.064 0.039  1.806  O5  UGU 17 
UGU C16 C15 C 0 1 N N N N N N 114.717 102.610 82.461 -3.932 -0.810 -0.283 C16 UGU 18 
UGU C17 C16 C 0 1 N N N N N N 115.278 103.781 83.264 -4.846 -1.822 0.411  C17 UGU 19 
UGU C18 C17 C 0 1 N N N N N N 114.843 105.130 82.695 -6.092 -2.055 -0.445 C18 UGU 20 
UGU C19 C18 C 0 1 N N N N N N 116.030 105.945 82.185 -7.006 -3.067 0.249  C19 UGU 21 
UGU C20 C19 C 0 1 N N N N N N 115.692 106.780 80.950 -8.252 -3.301 -0.608 C20 UGU 22 
UGU O1  O4  O 0 1 N N N N N N 118.568 95.478  75.586 6.137  -3.528 -0.519 O1  UGU 23 
UGU C1  C20 C 0 1 N N N N N N 117.677 95.560  76.477 5.008  -3.958 -0.498 C1  UGU 24 
UGU O2  O5  O 0 1 N N N N N N 117.856 95.024  77.602 4.762  -5.217 -0.894 O2  UGU 25 
UGU H1  H1  H 0 1 N N N N N N 116.523 96.968  75.327 3.395  -3.539 0.835  H1  UGU 26 
UGU H2  H2  H 0 1 N N N N N N 115.576 95.600  76.004 3.147  -2.967 -0.832 H2  UGU 27 
UGU H3  H3  H 0 1 N N N N N N 115.930 96.538  78.291 5.152  -1.820 1.164  H3  UGU 28 
UGU H4  H4  H 0 1 N N N N N N 116.773 97.943  77.554 4.904  -1.248 -0.503 H4  UGU 29 
UGU H5  H5  H 0 1 N N N N N N 114.381 97.900  76.159 2.546  -0.702 0.035  H5  UGU 30 
UGU H6  H6  H 0 1 N N N N N N 113.878 97.361  77.797 2.793  -1.274 1.702  H6  UGU 31 
UGU H7  H7  H 0 1 N N N N N N 115.452 100.001 77.251 4.637  0.614  1.916  H7  UGU 32 
UGU H8  H8  H 0 1 N N N N N N 114.136 100.792 79.072 3.744  2.583  0.891  H8  UGU 33 
UGU H9  H9  H 0 1 N N N N N N 112.013 99.202  79.066 2.257  1.809  -1.148 H9  UGU 34 
UGU H10 H10 H 0 1 N N N N N N 113.189 97.847  78.971 1.653  0.508  -0.095 H10 UGU 35 
UGU H11 H11 H 0 1 N N N N N N 112.386 99.541  81.308 0.803  2.265  1.501  H11 UGU 36 
UGU H12 H12 H 0 1 N N N N N N 111.065 97.690  81.542 1.475  4.434  1.239  H12 UGU 37 
UGU H13 H13 H 0 1 N N N N N N 111.420 95.723  80.393 3.042  4.876  -0.510 H13 UGU 38 
UGU H14 H14 H 0 1 N N N N N N 114.960 98.102  80.921 -0.152 1.939  -1.341 H14 UGU 39 
UGU H15 H15 H 0 1 N N N N N N 113.372 98.401  83.590 -1.416 4.036  0.509  H15 UGU 40 
UGU H16 H16 H 0 1 N N N N N N 114.665 96.478  83.929 -2.173 4.794  -1.625 H16 UGU 41 
UGU H17 H17 H 0 1 N N N N N N 111.876 96.557  83.131 0.195  5.649  -0.287 H17 UGU 42 
UGU H18 H18 H 0 1 N N N N N N 113.060 95.743  82.054 0.676  4.609  -1.664 H18 UGU 43 
UGU H19 H19 H 0 1 N N N N N N 115.397 100.399 81.968 -1.634 1.691  1.390  H19 UGU 44 
UGU H21 H21 H 0 1 N N N N N N 112.450 99.997  82.706 -1.398 0.061  -1.159 H21 UGU 45 
UGU H23 H23 H 0 1 N N N N N N 112.749 102.398 83.375 -2.201 -1.531 0.776  H23 UGU 46 
UGU H24 H24 H 0 1 N N N N N N 113.647 100.960 84.992 -3.502 0.894  1.701  H24 UGU 47 
UGU H25 H25 H 0 1 N N N N N N 115.544 101.936 82.191 -4.466 0.132  -0.413 H25 UGU 48 
UGU H26 H26 H 0 1 N N N N N N 114.248 103.000 81.546 -3.636 -1.196 -1.258 H26 UGU 49 
UGU H27 H27 H 0 1 N N N N N N 114.922 103.702 84.302 -4.312 -2.764 0.540  H27 UGU 50 
UGU H28 H28 H 0 1 N N N N N N 116.377 103.727 83.249 -5.142 -1.435 1.386  H28 UGU 51 
UGU H29 H29 H 0 1 N N N N N N 114.333 105.701 83.485 -6.626 -1.113 -0.575 H29 UGU 52 
UGU H30 H30 H 0 1 N N N N N N 114.147 104.956 81.861 -5.796 -2.442 -1.421 H30 UGU 53 
UGU H31 H31 H 0 1 N N N N N N 116.846 105.254 81.928 -6.472 -4.009 0.378  H31 UGU 54 
UGU H32 H32 H 0 1 N N N N N N 116.361 106.622 82.986 -7.302 -2.681 1.224  H32 UGU 55 
UGU H33 H33 H 0 1 N N N N N N 116.583 107.342 80.632 -8.785 -2.359 -0.737 H33 UGU 56 
UGU H34 H34 H 0 1 N N N N N N 115.367 106.115 80.136 -7.956 -3.687 -1.583 H34 UGU 57 
UGU H35 H35 H 0 1 N N N N N N 114.882 107.484 81.194 -8.903 -4.022 -0.113 H35 UGU 58 
UGU H36 H36 H 0 1 N N N N N N 118.706 94.600  77.620 5.520  -5.741 -1.186 H36 UGU 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UGU O1  C1  DOUB N N 1  
UGU C2  C1  SING N N 2  
UGU C2  C3  SING N N 3  
UGU C1  O2  SING N N 4  
UGU C4  C3  SING N N 5  
UGU C4  C5  SING N N 6  
UGU C5  C6  DOUB N Z 7  
UGU C6  C7  SING N N 8  
UGU C7  C8  SING N N 9  
UGU O3  C9  SING N N 10 
UGU C8  C9  SING N N 11 
UGU C8  C12 SING N N 12 
UGU C20 C19 SING N N 13 
UGU C9  C10 SING N N 14 
UGU C12 C13 SING N N 15 
UGU C12 C11 SING N N 16 
UGU C13 C14 DOUB N E 17 
UGU C19 C18 SING N N 18 
UGU C10 C11 SING N N 19 
UGU C16 C15 SING N N 20 
UGU C16 C17 SING N N 21 
UGU C14 C15 SING N N 22 
UGU C18 C17 SING N N 23 
UGU C11 O4  SING N N 24 
UGU C15 O5  SING N N 25 
UGU C2  H1  SING N N 26 
UGU C2  H2  SING N N 27 
UGU C3  H3  SING N N 28 
UGU C3  H4  SING N N 29 
UGU C4  H5  SING N N 30 
UGU C4  H6  SING N N 31 
UGU C5  H7  SING N N 32 
UGU C6  H8  SING N N 33 
UGU C7  H9  SING N N 34 
UGU C7  H10 SING N N 35 
UGU C8  H11 SING N N 36 
UGU C9  H12 SING N N 37 
UGU O3  H13 SING N N 38 
UGU C12 H14 SING N N 39 
UGU C11 H15 SING N N 40 
UGU O4  H16 SING N N 41 
UGU C10 H17 SING N N 42 
UGU C10 H18 SING N N 43 
UGU C13 H19 SING N N 44 
UGU C14 H21 SING N N 45 
UGU C15 H23 SING N N 46 
UGU O5  H24 SING N N 47 
UGU C16 H25 SING N N 48 
UGU C16 H26 SING N N 49 
UGU C17 H27 SING N N 50 
UGU C17 H28 SING N N 51 
UGU C18 H29 SING N N 52 
UGU C18 H30 SING N N 53 
UGU C19 H31 SING N N 54 
UGU C19 H32 SING N N 55 
UGU C20 H33 SING N N 56 
UGU C20 H34 SING N N 57 
UGU C20 H35 SING N N 58 
UGU O2  H36 SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UGU InChI            InChI                1.06  "InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,18-,19+/m0/s1" 
UGU InChIKey         InChI                1.06  PXGPLTODNUVGFL-YNNPMVKQSA-N                                                                                                                                                               
UGU SMILES_CANONICAL CACTVS               3.385 "CCCCC[C@H](O)/C=C/[C@H]1[C@H](O)C[C@H](O)[C@@H]1C\C=C/CCCC(O)=O"                                                                                                                         
UGU SMILES           CACTVS               3.385 "CCCCC[CH](O)C=C[CH]1[CH](O)C[CH](O)[CH]1CC=CCCCC(O)=O"                                                                                                                                   
UGU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC[C@@H](/C=C/[C@H]1[C@@H](C[C@@H]([C@@H]1C/C=C\CCCC(=O)O)O)O)O"                                                                                                                      
UGU SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCC(C=CC1C(CC(C1CC=CCCCC(=O)O)O)O)O"                                                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           UGU 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-3,5-bis(oxidanyl)-2-[(~{E},3~{S})-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UGU "Create component" 2023-05-30 PDBJ 
UGU "Initial release"  2023-07-12 RCSB 
UGU "Modify synonyms"  2023-11-01 PDBJ 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 UGU Dinoprost           PUBCHEM ? 
2 UGU "Prostaglandin F2a" PUBCHEM ? 
3 UGU PGF2alpha           PUBCHEM ? 
# 
