data_U4U
# 
_chem_comp.id                                    U4U 
_chem_comp.name                                  "1-[(5S,9P,12aR)-9-(2-chloro-6-hydroxyphenyl)-8-ethynyl-10-fluoro-3,4,12,12a-tetrahydro-6H-pyrazino[2,1-c][1,4]benzoxazepin-2(1H)-yl]propan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H22 Cl F N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        428.884 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U4U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8DNJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U4U C23 C1  C  0 1 N N N N N N 16.107 -6.560 3.762  3.807  -3.240 -0.994 C23 U4U 1  
U4U C13 C2  C  0 1 N N N N N N 15.075 -6.022 3.681  3.034  -2.480 -0.545 C13 U4U 2  
U4U C2  C3  C  0 1 Y N N N N N 13.808 -5.374 3.571  2.091  -1.551 0.003  C2  U4U 3  
U4U C3  C4  C  0 1 Y N N N N N 13.006 -5.746 2.500  0.775  -1.950 0.241  C3  U4U 4  
U4U C4  C5  C  0 1 Y N N N N N 11.762 -5.155 2.332  -0.128 -1.050 0.766  C4  U4U 5  
U4U C7  C6  C  0 1 N N N N N N 11.007 -5.673 1.095  -1.542 -1.471 1.064  C7  U4U 6  
U4U N1  N1  N  0 1 N N N N N N 10.375 -4.533 0.421  -2.480 -0.810 0.130  N1  U4U 7  
U4U C10 C7  C  0 1 N N N N N N 10.160 -4.844 -1.003 -3.626 -1.724 -0.033 C10 U4U 8  
U4U C11 C8  C  0 1 N N N N N N 9.638  -3.597 -1.734 -4.641 -1.153 -1.021 C11 U4U 9  
U4U N2  N2  N  0 1 N N N N N N 8.433  -3.088 -1.049 -5.031 0.178  -0.523 N2  U4U 10 
U4U C20 C9  C  0 1 N N N N N N 7.330  -2.793 -1.754 -6.322 0.499  -0.308 C20 U4U 11 
U4U O3  O1  O  0 1 N N N N N N 6.310  -2.401 -1.203 -6.613 1.602  0.102  O3  U4U 12 
U4U C21 C10 C  0 1 N N N N N N 7.297  -2.942 -3.271 -7.405 -0.514 -0.579 C21 U4U 13 
U4U C22 C11 C  0 1 N N N N N N 6.161  -3.705 -3.955 -8.769 0.099  -0.256 C22 U4U 14 
U4U C12 C12 C  0 1 N N N N N N 8.488  -2.953 0.430  -3.953 1.137  -0.270 C12 U4U 15 
U4U C8  C13 C  0 1 N N R N N N 9.062  -4.242 1.028  -2.875 0.509  0.627  C8  U4U 16 
U4U C9  C14 C  0 1 N N N N N N 9.100  -4.250 2.572  -1.699 1.491  0.626  C9  U4U 17 
U4U O1  O2  O  0 1 N N N N N N 10.139 -3.517 3.201  -0.674 1.117  1.536  O1  U4U 18 
U4U C5  C15 C  0 1 Y N N N N N 11.325 -4.198 3.238  0.258  0.248  1.047  C5  U4U 19 
U4U C6  C16 C  0 1 Y N N N N N 12.132 -3.826 4.315  1.561  0.663  0.827  C6  U4U 20 
U4U F1  F1  F  0 1 N N N N N N 11.711 -2.898 5.190  1.930  1.930  1.118  F1  U4U 21 
U4U C1  C17 C  0 1 Y N N N N N 13.382 -4.419 4.500  2.491  -0.238 0.308  C1  U4U 22 
U4U C14 C18 C  0 1 Y N N N N N 14.227 -4.026 5.555  3.890  0.188  0.075  C14 U4U 23 
U4U C15 C19 C  0 1 Y N N N N N 14.067 -4.400 6.889  4.260  0.737  -1.153 C15 U4U 24 
U4U CL1 CL1 CL 0 0 N N N N N N 12.764 -5.407 7.395  3.080  0.926  -2.412 CL1 U4U 25 
U4U C16 C20 C  0 1 Y N N N N N 14.975 -3.952 7.859  5.567  1.132  -1.364 C16 U4U 26 
U4U C17 C21 C  0 1 Y N N N N N 16.049 -3.129 7.515  6.510  0.984  -0.363 C17 U4U 27 
U4U C18 C22 C  0 1 Y N N N N N 16.218 -2.753 6.187  6.154  0.441  0.857  C18 U4U 28 
U4U C19 C23 C  0 1 Y N N N N N 15.305 -3.191 5.225  4.846  0.045  1.086  C19 U4U 29 
U4U O2  O3  O  0 1 N N N N N N 15.493 -2.813 3.930  4.494  -0.483 2.287  O2  U4U 30 
U4U H1  H1  H  0 1 N N N N N N 17.045 -7.049 3.836  4.498  -3.921 -1.395 H1  U4U 31 
U4U H2  H2  H  0 1 N N N N N N 13.350 -6.493 1.800  0.465  -2.959 0.014  H2  U4U 32 
U4U H3  H3  H  0 1 N N N N N N 10.236 -6.393 1.406  -1.627 -2.553 0.956  H3  U4U 33 
U4U H4  H4  H  0 1 N N N N N N 11.713 -6.164 0.409  -1.795 -1.190 2.086  H4  U4U 34 
U4U H6  H6  H  0 1 N N N N N N 9.423  -5.655 -1.093 -3.269 -2.685 -0.401 H6  U4U 35 
U4U H7  H7  H  0 1 N N N N N N 11.111 -5.161 -1.455 -4.109 -1.868 0.934  H7  U4U 36 
U4U H8  H8  H  0 1 N N N N N N 9.385  -3.860 -2.772 -4.188 -1.062 -2.008 H8  U4U 37 
U4U H9  H9  H  0 1 N N N N N N 10.416 -2.819 -1.732 -5.516 -1.801 -1.071 H9  U4U 38 
U4U H10 H10 H  0 1 N N N N N N 8.232  -3.446 -3.558 -7.377 -0.805 -1.629 H10 U4U 39 
U4U H11 H11 H  0 1 N N N N N N 7.287  -1.924 -3.687 -7.245 -1.393 0.046  H11 U4U 40 
U4U H12 H12 H  0 1 N N N N N N 6.318  -3.700 -5.044 -8.797 0.390  0.794  H12 U4U 41 
U4U H13 H13 H  0 1 N N N N N N 6.146  -4.743 -3.592 -8.929 0.978  -0.880 H13 U4U 42 
U4U H14 H14 H  0 1 N Y N N N N 5.201  -3.221 -3.721 -9.552 -0.633 -0.451 H14 U4U 43 
U4U H15 H15 H  0 1 N N N N N N 9.132  -2.103 0.699  -3.504 1.433  -1.219 H15 U4U 44 
U4U H16 H16 H  0 1 N N N N N N 7.475  -2.784 0.823  -4.362 2.019  0.222  H16 U4U 45 
U4U H17 H17 H  0 1 N N N N N N 8.381  -5.053 0.731  -3.260 0.414  1.642  H17 U4U 46 
U4U H18 H18 H  0 1 N N N N N N 8.144  -3.840 2.928  -1.278 1.536  -0.379 H18 U4U 47 
U4U H19 H19 H  0 1 N N N N N N 9.192  -5.297 2.895  -2.067 2.481  0.896  H19 U4U 48 
U4U H20 H20 H  0 1 N N N N N N 14.841 -4.248 8.889  5.853  1.558  -2.315 H20 U4U 49 
U4U H21 H21 H  0 1 N N N N N N 16.740 -2.788 8.271  7.530  1.295  -0.535 H21 U4U 50 
U4U H22 H22 H  0 1 N N N N N N 17.050 -2.126 5.901  6.896  0.328  1.634  H22 U4U 51 
U4U H23 H23 H  0 1 N N N N N N 16.258 -2.253 3.871  4.588  -1.445 2.336  H23 U4U 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U4U C22 C21 SING N N 1  
U4U C21 C20 SING N N 2  
U4U C20 O3  DOUB N N 3  
U4U C20 N2  SING N N 4  
U4U C11 N2  SING N N 5  
U4U C11 C10 SING N N 6  
U4U N2  C12 SING N N 7  
U4U C10 N1  SING N N 8  
U4U N1  C8  SING N N 9  
U4U N1  C7  SING N N 10 
U4U C12 C8  SING N N 11 
U4U C8  C9  SING N N 12 
U4U C7  C4  SING N N 13 
U4U C4  C3  DOUB Y N 14 
U4U C4  C5  SING Y N 15 
U4U C3  C2  SING Y N 16 
U4U C9  O1  SING N N 17 
U4U O1  C5  SING N N 18 
U4U C5  C6  DOUB Y N 19 
U4U C2  C13 SING N N 20 
U4U C2  C1  DOUB Y N 21 
U4U C13 C23 TRIP N N 22 
U4U O2  C19 SING N N 23 
U4U C6  C1  SING Y N 24 
U4U C6  F1  SING N N 25 
U4U C1  C14 SING N N 26 
U4U C19 C14 DOUB Y N 27 
U4U C19 C18 SING Y N 28 
U4U C14 C15 SING Y N 29 
U4U C18 C17 DOUB Y N 30 
U4U C15 CL1 SING N N 31 
U4U C15 C16 DOUB Y N 32 
U4U C17 C16 SING Y N 33 
U4U C23 H1  SING N N 34 
U4U C3  H2  SING N N 35 
U4U C7  H3  SING N N 36 
U4U C7  H4  SING N N 37 
U4U C10 H6  SING N N 38 
U4U C10 H7  SING N N 39 
U4U C11 H8  SING N N 40 
U4U C11 H9  SING N N 41 
U4U C21 H10 SING N N 42 
U4U C21 H11 SING N N 43 
U4U C22 H12 SING N N 44 
U4U C22 H13 SING N N 45 
U4U C22 H14 SING N N 46 
U4U C12 H15 SING N N 47 
U4U C12 H16 SING N N 48 
U4U C8  H17 SING N N 49 
U4U C9  H18 SING N N 50 
U4U C9  H19 SING N N 51 
U4U C16 H20 SING N N 52 
U4U C17 H21 SING N N 53 
U4U C18 H22 SING N N 54 
U4U O2  H23 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U4U SMILES           ACDLabs              12.01 "Oc1cccc(Cl)c1c1c(C#C)cc2CN3CCN(CC3COc2c1F)C(=O)CC"                                                                                                                  
U4U InChI            InChI                1.06  "InChI=1S/C23H22ClFN2O3/c1-3-14-10-15-11-26-8-9-27(19(29)4-2)12-16(26)13-30-23(15)22(25)20(14)21-17(24)6-5-7-18(21)28/h1,5-7,10,16,28H,4,8-9,11-13H2,2H3/t16-/m1/s1" 
U4U InChIKey         InChI                1.06  OMTNYVPXTAMVCY-MRXNPFEDSA-N                                                                                                                                          
U4U SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N1CCN2Cc3cc(C#C)c(c(F)c3OC[C@H]2C1)c4c(O)cccc4Cl"                                                                                                            
U4U SMILES           CACTVS               3.385 "CCC(=O)N1CCN2Cc3cc(C#C)c(c(F)c3OC[CH]2C1)c4c(O)cccc4Cl"                                                                                                             
U4U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN2Cc3cc(c(c(c3OC[C@H]2C1)F)c4c(cccc4Cl)O)C#C"                                                                                                            
U4U SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN2Cc3cc(c(c(c3OCC2C1)F)c4c(cccc4Cl)O)C#C"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
U4U "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(5S,9P,12aR)-9-(2-chloro-6-hydroxyphenyl)-8-ethynyl-10-fluoro-3,4,12,12a-tetrahydro-6H-pyrazino[2,1-c][1,4]benzoxazepin-2(1H)-yl]propan-1-one"    
U4U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(4~{a}~{R})-8-(2-chloranyl-6-oxidanyl-phenyl)-9-ethynyl-7-fluoranyl-1,2,4,4~{a},5,11-hexahydropyrazino[2,1-c][1,4]benzoxazepin-3-yl]propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U4U "Create component" 2022-08-04 RCSB 
U4U "Initial release"  2022-08-17 RCSB 
U4U "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            U4U 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C22 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
