data_TFU
#

_chem_comp.id                                   TFU
_chem_comp.name                                 "methyl 1-seleno-beta-L-fucopyranoside"
_chem_comp.type                                 L-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O4 Se"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;(2S,3S,4R,5S,6R)-2-methyl-6-methylselanyl-oxane-3,4,5-triol; methyl 6-deoxy-1-seleno-beta-L-galactopyranoside; methyl
1-seleno-beta-L-fucoside; methyl 1-seleno-L-fucoside; methyl 1-seleno-fucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-11-12
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       241.144
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TFU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5EO8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  TFU  "(2S,3S,4R,5S,6R)-2-methyl-6-methylselanyl-oxane-3,4,5-triol"  PDB  ?  
2  TFU  "methyl 6-deoxy-1-seleno-beta-L-galactopyranoside"             PDB  ?  
3  TFU  "methyl 1-seleno-beta-L-fucoside"                              PDB  ?  
4  TFU  "methyl 1-seleno-L-fucoside"                                   PDB  ?  
5  TFU  "methyl 1-seleno-fucoside"                                     PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TFU  C1   C1   C   0  1  N  N  R  51.304   8.146  11.993  -0.308   0.009   0.489  C1   TFU   1  
TFU  C2   C2   C   0  1  N  N  S  51.232   8.891  13.321   0.580   1.151  -0.013  C2   TFU   2  
TFU  O2   O2   O   0  1  N  N  N  52.466   8.754  14.041   0.051   2.400   0.437  O2   TFU   3  
TFU  C3   C3   C   0  1  N  N  R  50.950  10.369  13.082   1.997   0.966   0.540  C3   TFU   4  
TFU  O3   O3   O   0  1  N  N  N  50.687  11.008  14.339   2.851   1.987   0.018  O3   TFU   5  
TFU  C4   C4   C   0  1  N  N  S  49.758  10.554  12.153   2.523  -0.408   0.116  C4   TFU   6  
TFU  O4   O4   O   0  1  N  N  N  48.563  10.178  12.845   2.613  -0.466  -1.309  O4   TFU   7  
TFU  C5   C5   C   0  1  N  N  S  49.933   9.709  10.889   1.560  -1.490   0.612  C5   TFU   8  
TFU  C6   C6   C   0  1  N  N  N  48.756   9.831   9.925   2.047  -2.862   0.141  C6   TFU   9  
TFU  O5   O5   O   0  1  N  N  N  50.102   8.343  11.255   0.255  -1.241   0.087  O5   TFU  10  
TFU  SE1  SE1  SE  0  1  N  N  N  51.552   6.238  12.294  -2.103   0.194  -0.275  SE1  TFU  11  
TFU  C7   C7   C   0  1  N  N  N  53.338   6.176  11.519  -3.006  -1.357   0.513  C7   TFU  12  
TFU  H1   H1   H   0  1  N  N  N  52.187   8.473  11.424  -0.369   0.047   1.576  H1   TFU  13  
TFU  H2   H2   H   0  1  N  N  N  50.407   8.469  13.914   0.609   1.139  -1.102  H2   TFU  14  
TFU  HO2  HO2  H   0  1  N  Y  N  52.406   9.223  14.865  -0.847   2.581   0.128  HO2  TFU  15  
TFU  H3   H3   H   0  1  N  N  N  51.835  10.823  12.612   1.975   1.030   1.628  H3   TFU  16  
TFU  HO3  HO3  H   0  1  N  Y  N  51.432  10.891  14.916   2.572   2.885   0.243  HO3  TFU  17  
TFU  H4   H4   H   0  1  N  N  N  49.702  11.613  11.860   3.510  -0.570   0.550  H4   TFU  18  
TFU  HO4  HO4  H   0  1  N  Y  N  48.468  10.710  13.626   2.941  -1.311  -1.648  HO4  TFU  19  
TFU  H5   H5   H   0  1  N  N  N  50.836  10.061  10.369   1.523  -1.472   1.702  H5   TFU  20  
TFU  H61  H63  H   0  1  N  N  N  48.622  10.885   9.640   2.085  -2.880  -0.948  H61  TFU  21  
TFU  H62  H62  H   0  1  N  N  N  48.955   9.231   9.025   3.043  -3.051   0.542  H62  TFU  22  
TFU  H63  H61  H   0  1  N  N  N  47.842   9.465  10.415   1.361  -3.632   0.494  H63  TFU  23  
TFU  H72  H72  H   0  1  N  N  N  53.725   5.147  11.570  -2.494  -2.270   0.206  H72  TFU  24  
TFU  H7   H7   H   0  1  N  N  N  53.293   6.500  10.469  -2.985  -1.277   1.599  H7   TFU  25  
TFU  H71  H71  H   0  1  N  N  N  54.005   6.846  12.081  -4.040  -1.388   0.171  H71  TFU  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TFU  C6  C5   SING  N  N   1  
TFU  C5  O5   SING  N  N   2  
TFU  C5  C4   SING  N  N   3  
TFU  O5  C1   SING  N  N   4  
TFU  C7  SE1  SING  N  N   5  
TFU  C1  SE1  SING  N  N   6  
TFU  C1  C2   SING  N  N   7  
TFU  C4  O4   SING  N  N   8  
TFU  C4  C3   SING  N  N   9  
TFU  C3  C2   SING  N  N  10  
TFU  C3  O3   SING  N  N  11  
TFU  C2  O2   SING  N  N  12  
TFU  C1  H1   SING  N  N  13  
TFU  C2  H2   SING  N  N  14  
TFU  O2  HO2  SING  N  N  15  
TFU  C3  H3   SING  N  N  16  
TFU  O3  HO3  SING  N  N  17  
TFU  C4  H4   SING  N  N  18  
TFU  O4  HO4  SING  N  N  19  
TFU  C5  H5   SING  N  N  20  
TFU  C6  H61  SING  N  N  21  
TFU  C6  H62  SING  N  N  22  
TFU  C6  H63  SING  N  N  23  
TFU  C7  H72  SING  N  N  24  
TFU  C7  H7   SING  N  N  25  
TFU  C7  H71  SING  N  N  26  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TFU  InChI             InChI                 1.03   "InChI=1S/C7H14O4Se/c1-3-4(8)5(9)6(10)7(11-3)12-2/h3-10H,1-2H3/t3-,4+,5+,6-,7+/m0/s1"  
TFU  InChIKey          InChI                 1.03   VHTNTJQSKJZERS-CXNFULCWSA-N  
TFU  SMILES_CANONICAL  CACTVS                3.385  "C[Se][C@H]1O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]1O"  
TFU  SMILES            CACTVS                3.385  "C[Se][CH]1O[CH](C)[CH](O)[CH](O)[CH]1O"  
TFU  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.4  "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)[Se]C)O)O)O"  
TFU  SMILES            "OpenEye OEToolkits"  2.0.4  "CC1C(C(C(C(O1)[Se]C)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          TFU
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.4
_pdbx_chem_comp_identifier.identifier       "(2~{S},3~{S},4~{R},5~{S},6~{R})-2-methyl-6-methylselanyl-oxane-3,4,5-triol"
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
TFU  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
TFU  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
TFU  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
TFU  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TFU  "Create component"          2015-11-12  RCSB  
TFU  "Initial release"           2016-06-29  RCSB  
TFU  "Other modification"        2020-07-03  RCSB  
TFU  "Modify name"               2020-07-17  RCSB  
TFU  "Modify synonyms"           2020-07-17  RCSB  
TFU  "Modify internal type"      2020-07-17  RCSB  
TFU  "Modify linking type"       2020-07-17  RCSB  
TFU  "Modify atom id"            2020-07-17  RCSB  
TFU  "Modify component atom id"  2020-07-17  RCSB  
TFU  "Modify leaving atom flag"  2020-07-17  RCSB  
##
