data_QBU
# 
_chem_comp.id                                    QBU 
_chem_comp.name                                  "N-(5-phenylpentyl)adenosine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H27 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-06 
_chem_comp.pdbx_modified_date                    2023-01-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        413.470 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QBU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CY1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QBU C18 C1  C 0 1 Y N N -31.840 2.226  2.954  -10.714 -1.618 0.542  C18 QBU 1  
QBU C17 C2  C 0 1 Y N N -30.564 2.698  3.175  -10.132 -0.924 1.586  C17 QBU 2  
QBU C16 C3  C 0 1 Y N N -29.832 2.251  4.263  -9.034  -0.117 1.352  C16 QBU 3  
QBU C15 C4  C 0 1 Y N N -30.370 1.323  5.146  -8.519  -0.004 0.075  C15 QBU 4  
QBU C14 C5  C 0 1 N N N -29.583 0.851  6.345  -7.322  0.877  -0.180 C14 QBU 5  
QBU C13 C6  C 0 1 N N N -29.902 1.639  7.612  -6.041  0.058  -0.012 C13 QBU 6  
QBU C12 C7  C 0 1 N N N -28.985 1.326  8.779  -4.826  0.951  -0.270 C12 QBU 7  
QBU C11 C8  C 0 1 N N N -29.179 2.261  9.959  -3.545  0.132  -0.102 C11 QBU 8  
QBU C10 C9  C 0 1 N N N -28.327 1.910  11.162 -2.331  1.026  -0.361 C10 QBU 9  
QBU C9  C10 C 0 1 Y N N -29.521 2.779  13.174 0.130   0.840  -0.385 C9  QBU 10 
QBU N2  N1  N 0 1 Y N N -31.453 2.731  15.227 2.529   2.053  -0.769 N2  QBU 11 
QBU C8  C11 C 0 1 Y N N -30.473 3.629  15.092 1.392   2.703  -0.899 C8  QBU 12 
QBU C7  C12 C 0 1 Y N N -31.421 1.827  14.247 2.539   0.765  -0.441 C7  QBU 13 
QBU N1  N2  N 0 1 Y N N -30.798 0.699  12.361 1.607   -1.181 0.083  N1  QBU 14 
QBU C1  C13 C 0 1 N N R -34.604 -0.132 14.231 5.517   0.597  0.998  C1  QBU 15 
QBU C5  C14 C 0 1 Y N N -31.840 0.132  12.925 2.897   -1.346 0.084  C5  QBU 16 
QBU C6  C15 C 0 1 Y N N -30.521 1.771  13.193 1.317   0.104  -0.234 C6  QBU 17 
QBU C4  C16 C 0 1 N N R -33.342 0.330  14.954 4.963   0.043  -0.333 C4  QBU 18 
QBU C3  C17 C 0 1 N N N -33.571 -3.069 15.372 7.712   -2.287 0.219  C3  QBU 19 
QBU O3  O1  O 0 1 N N N -32.888 -0.779 15.706 5.647   -1.215 -0.523 O3  QBU 20 
QBU C2  C18 C 0 1 N N R -33.970 -1.714 15.911 7.012   -0.970 -0.118 C2  QBU 21 
QBU O2  O2  O 0 1 N N N -34.339 -4.106 15.970 7.847   -3.073 -0.967 O2  QBU 22 
QBU N   N3  N 0 1 Y N N -32.261 0.753  14.067 3.517   -0.174 -0.232 N   QBU 23 
QBU C   C19 C 0 1 N N S -35.207 -1.089 15.263 6.897   -0.084 1.142  C   QBU 24 
QBU O   O3  O 0 1 N N N -35.993 -0.402 16.231 7.938   0.894  1.164  O   QBU 25 
QBU C19 C20 C 0 1 Y N N -32.384 1.302  3.821  -10.199 -1.504 -0.736 C19 QBU 26 
QBU C20 C21 C 0 1 Y N N -31.655 0.852  4.909  -9.100  -0.698 -0.969 C20 QBU 27 
QBU N3  N4  N 0 1 Y N N -29.530 3.705  14.148 0.219   2.125  -0.715 N3  QBU 28 
QBU N4  N5  N 0 1 N N N -28.536 2.845  12.255 -1.104  0.242  -0.199 N4  QBU 29 
QBU O1  O4  O 0 1 N N N -35.448 0.985  13.983 5.665   2.017  0.925  O1  QBU 30 
QBU H1  H1  H 0 1 N N N -32.410 2.578  2.107  -11.569 -2.252 0.725  H1  QBU 31 
QBU H2  H2  H 0 1 N N N -30.133 3.420  2.497  -10.534 -1.012 2.584  H2  QBU 32 
QBU H3  H3  H 0 1 N N N -28.833 2.628  4.426  -8.579  0.426  2.168  H3  QBU 33 
QBU H4  H4  H 0 1 N N N -29.816 -0.209 6.523  -7.371  1.271  -1.195 H4  QBU 34 
QBU H5  H5  H 0 1 N N N -28.511 0.959  6.125  -7.321  1.703  0.531  H5  QBU 35 
QBU H6  H6  H 0 1 N N N -29.817 2.712  7.383  -5.992  -0.337 1.003  H6  QBU 36 
QBU H7  H7  H 0 1 N N N -30.935 1.409  7.912  -6.042  -0.769 -0.723 H7  QBU 37 
QBU H8  H8  H 0 1 N N N -29.182 0.297  9.112  -4.875  1.345  -1.285 H8  QBU 38 
QBU H9  H9  H 0 1 N N N -27.943 1.407  8.436  -4.825  1.778  0.441  H9  QBU 39 
QBU H10 H10 H 0 1 N N N -28.923 3.282  9.639  -3.497  -0.262 0.913  H10 QBU 40 
QBU H11 H11 H 0 1 N N N -30.236 2.225  10.260 -3.546  -0.694 -0.813 H11 QBU 41 
QBU H12 H12 H 0 1 N N N -28.590 0.898  11.503 -2.379  1.420  -1.376 H12 QBU 42 
QBU H13 H13 H 0 1 N N N -27.267 1.935  10.869 -2.330  1.852  0.350  H13 QBU 43 
QBU H14 H14 H 0 1 N N N -30.438 4.398  15.849 1.419   3.750  -1.166 H14 QBU 44 
QBU H15 H15 H 0 1 N N N -34.346 -0.672 13.308 4.866   0.322  1.827  H15 QBU 45 
QBU H16 H16 H 0 1 N N N -32.321 -0.747 12.522 3.403   -2.275 0.304  H16 QBU 46 
QBU H17 H17 H 0 1 N N N -33.608 1.159  15.627 5.188   0.725  -1.152 H17 QBU 47 
QBU H18 H18 H 0 1 N N N -33.733 -3.084 14.284 8.700   -2.079 0.631  H18 QBU 48 
QBU H19 H19 H 0 1 N N N -32.506 -3.241 15.587 7.121   -2.836 0.953  H19 QBU 49 
QBU H20 H20 H 0 1 N N N -34.163 -1.814 16.989 7.553   -0.444 -0.905 H20 QBU 50 
QBU H21 H21 H 0 1 N N N -34.070 -4.945 15.615 8.283   -3.924 -0.828 H21 QBU 51 
QBU H22 H22 H 0 1 N N N -35.793 -1.867 14.751 6.927   -0.696 2.043  H22 QBU 52 
QBU H23 H23 H 0 1 N N N -36.349 -1.027 16.852 8.826   0.521  1.253  H23 QBU 53 
QBU H24 H24 H 0 1 N N N -33.383 0.928  3.651  -10.654 -2.046 -1.552 H24 QBU 54 
QBU H25 H25 H 0 1 N N N -32.090 0.127  5.581  -8.698  -0.609 -1.968 H25 QBU 55 
QBU H26 H26 H 0 1 N N N -27.685 2.830  12.780 -1.156  -0.698 0.037  H26 QBU 56 
QBU H27 H27 H 0 1 N N N -36.233 0.696  13.533 6.010   2.418  1.735  H27 QBU 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QBU C18 C17 DOUB Y N 1  
QBU C18 C19 SING Y N 2  
QBU C17 C16 SING Y N 3  
QBU C19 C20 DOUB Y N 4  
QBU C16 C15 DOUB Y N 5  
QBU C20 C15 SING Y N 6  
QBU C15 C14 SING N N 7  
QBU C14 C13 SING N N 8  
QBU C13 C12 SING N N 9  
QBU C12 C11 SING N N 10 
QBU C11 C10 SING N N 11 
QBU C10 N4  SING N N 12 
QBU N4  C9  SING N N 13 
QBU N1  C5  DOUB Y N 14 
QBU N1  C6  SING Y N 15 
QBU C5  N   SING Y N 16 
QBU C9  C6  DOUB Y N 17 
QBU C9  N3  SING Y N 18 
QBU C6  C7  SING Y N 19 
QBU O1  C1  SING N N 20 
QBU N   C7  SING Y N 21 
QBU N   C4  SING N N 22 
QBU N3  C8  DOUB Y N 23 
QBU C1  C4  SING N N 24 
QBU C1  C   SING N N 25 
QBU C7  N2  DOUB Y N 26 
QBU C4  O3  SING N N 27 
QBU C8  N2  SING Y N 28 
QBU C   C2  SING N N 29 
QBU C   O   SING N N 30 
QBU C3  C2  SING N N 31 
QBU C3  O2  SING N N 32 
QBU O3  C2  SING N N 33 
QBU C18 H1  SING N N 34 
QBU C17 H2  SING N N 35 
QBU C16 H3  SING N N 36 
QBU C14 H4  SING N N 37 
QBU C14 H5  SING N N 38 
QBU C13 H6  SING N N 39 
QBU C13 H7  SING N N 40 
QBU C12 H8  SING N N 41 
QBU C12 H9  SING N N 42 
QBU C11 H10 SING N N 43 
QBU C11 H11 SING N N 44 
QBU C10 H12 SING N N 45 
QBU C10 H13 SING N N 46 
QBU C8  H14 SING N N 47 
QBU C1  H15 SING N N 48 
QBU C5  H16 SING N N 49 
QBU C4  H17 SING N N 50 
QBU C3  H18 SING N N 51 
QBU C3  H19 SING N N 52 
QBU C2  H20 SING N N 53 
QBU O2  H21 SING N N 54 
QBU C   H22 SING N N 55 
QBU O   H23 SING N N 56 
QBU C19 H24 SING N N 57 
QBU C20 H25 SING N N 58 
QBU N4  H26 SING N N 59 
QBU O1  H27 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QBU SMILES           ACDLabs              12.01 "OCC1OC(n2cnc3c(NCCCCCc4ccccc4)ncnc32)C(O)C1O"                                                                                                                                                           
QBU InChI            InChI                1.03  "InChI=1S/C21H27N5O4/c27-11-15-17(28)18(29)21(30-15)26-13-25-16-19(23-12-24-20(16)26)22-10-6-2-5-9-14-7-3-1-4-8-14/h1,3-4,7-8,12-13,15,17-18,21,27-29H,2,5-6,9-11H2,(H,22,23,24)/t15-,17-,18-,21-/m1/s1" 
QBU InChIKey         InChI                1.03  OWDHJJGXMJRIBB-QTQZEZTPSA-N                                                                                                                                                                              
QBU SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(NCCCCCc4ccccc4)ncnc23"                                                                                                                                          
QBU SMILES           CACTVS               3.385 "OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(NCCCCCc4ccccc4)ncnc23"                                                                                                                                               
QBU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCCCCNc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]([C@H](O4)CO)O)O"                                                                                                                                   
QBU SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCCCCNc2c3c(ncn2)n(cn3)C4C(C(C(O4)CO)O)O"                                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
QBU "SYSTEMATIC NAME" ACDLabs              12.01 "N-(5-phenylpentyl)adenosine"                                                                       
QBU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-5-[6-(5-phenylpentylamino)purin-9-yl]oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QBU "Create component" 2022-06-06 RCSB 
QBU "Initial release"  2023-01-11 RCSB 
# 
