data_N3U
# 
_chem_comp.id                                    N3U 
_chem_comp.name                                  L-xylulose-5-phosphate 
_chem_comp.type                                  L-saccharide 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C5 H11 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-03-23 
_chem_comp.pdbx_modified_date                    2022-07-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.110 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N3U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UF3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N3U C01  C1  C 0 1 N N N -7.177 -5.199 13.166 0.592  0.341  0.377  C01  N3U 1  
N3U C02  C2  C 0 1 N N S -6.395 -6.041 14.236 -0.773 -0.179 -0.076 C02  N3U 2  
N3U C03  C3  C 0 1 N N R -5.413 -7.065 13.544 -1.878 0.558  0.685  C03  N3U 3  
N3U C04  C4  C 0 1 N N N -4.191 -6.406 12.851 -3.223 0.134  0.152  C04  N3U 4  
N3U C06  C5  C 0 1 N N N -3.182 -5.524 13.623 -3.835 -1.168 0.601  C06  N3U 5  
N3U O05  O1  O 0 1 N N N -4.028 -6.554 11.694 -3.810 0.838  -0.634 O05  N3U 6  
N3U O07  O2  O 0 1 N N N -1.931 -5.389 13.004 -5.100 -1.344 -0.038 O07  N3U 7  
N3U O08  O3  O 0 1 N N N -6.116 -7.839 12.584 -1.718 1.967  0.509  O08  N3U 8  
N3U O09  O4  O 0 1 N N N -5.732 -5.240 15.206 -0.928 0.047  -1.478 O09  N3U 9  
N3U O10  O5  O 0 1 N N N -6.291 -4.545 12.313 1.625  -0.426 -0.245 O10  N3U 10 
N3U O12  O6  O 0 1 N N N -5.512 -3.532 10.145 3.551  -0.461 1.543  O12  N3U 11 
N3U O13  O7  O 0 1 N N N -7.906 -3.671 10.588 4.062  -1.112 -0.952 O13  N3U 12 
N3U O14  O8  O 0 1 N N N -6.651 -5.686 10.034 3.501  1.261  -0.301 O14  N3U 13 
N3U P11  P1  P 0 1 N N N -6.595 -4.367 10.725 3.192  -0.154 0.004  P11  N3U 14 
N3U H012 H1  H 0 0 N N N -7.802 -4.453 13.679 0.695  1.388  0.092  H012 N3U 15 
N3U H011 H2  H 0 0 N N N -7.818 -5.870 12.576 0.675  0.250  1.460  H011 N3U 16 
N3U H021 H3  H 0 0 N N N -7.149 -6.648 14.758 -0.841 -1.248 0.130  H021 N3U 17 
N3U H031 H4  H 0 0 N N N -5.028 -7.729 14.332 -1.814 0.314  1.745  H031 N3U 18 
N3U H061 H5  H 0 0 N N N -3.619 -4.521 13.735 -3.174 -1.992 0.332  H061 N3U 19 
N3U H062 H6  H 0 0 N N N -3.027 -5.970 14.617 -3.973 -1.151 1.682  H062 N3U 20 
N3U H071 H7  H 0 0 N N N -1.970 -5.752 12.127 -5.553 -2.164 0.205  H071 N3U 21 
N3U H081 H8  H 0 0 N N N -5.691 -7.758 11.738 -1.764 2.256  -0.413 H081 N3U 22 
N3U H091 H9  H 0 0 N N N -5.278 -5.801 15.824 -0.878 0.978  -1.734 H091 N3U 23 
N3U H1   H10 H 0 1 N N N -5.078 -4.014 9.451  3.373  -1.372 1.814  H1   N3U 24 
N3U H2   H11 H 0 1 N N N -8.503 -4.215 10.088 5.018  -1.002 -0.855 H2   N3U 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N3U O14 P11  DOUB N N 1  
N3U O12 P11  SING N N 2  
N3U O13 P11  SING N N 3  
N3U P11 O10  SING N N 4  
N3U O05 C04  DOUB N N 5  
N3U O10 C01  SING N N 6  
N3U O08 C03  SING N N 7  
N3U C04 C03  SING N N 8  
N3U C04 C06  SING N N 9  
N3U O07 C06  SING N N 10 
N3U C01 C02  SING N N 11 
N3U C03 C02  SING N N 12 
N3U C02 O09  SING N N 13 
N3U C01 H012 SING N N 14 
N3U C01 H011 SING N N 15 
N3U C02 H021 SING N N 16 
N3U C03 H031 SING N N 17 
N3U C06 H061 SING N N 18 
N3U C06 H062 SING N N 19 
N3U O07 H071 SING N N 20 
N3U O08 H081 SING N N 21 
N3U O09 H091 SING N N 22 
N3U O12 H1   SING N N 23 
N3U O13 H2   SING N N 24 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N3U SMILES           ACDLabs              12.01 "O=P(O)(O)OCC(O)C(O)C(=O)CO"                                                                     
N3U InChI            InChI                1.03  "InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)/t4-,5-/m0/s1" 
N3U InChIKey         InChI                1.03  FNZLKVNUWIIPSJ-WHFBIAKZSA-N                                                                      
N3U SMILES_CANONICAL CACTVS               3.385 "OCC(=O)[C@H](O)[C@@H](O)CO[P](O)(O)=O"                                                          
N3U SMILES           CACTVS               3.385 "OCC(=O)[CH](O)[CH](O)CO[P](O)(O)=O"                                                             
N3U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]([C@H](C(=O)CO)O)O)OP(=O)(O)O"                                                          
N3U SMILES           "OpenEye OEToolkits" 2.0.7 "C(C(C(C(=O)CO)O)O)OP(=O)(O)O"                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
N3U "SYSTEMATIC NAME" ACDLabs              12.01 5-O-phosphono-L-xylulose                                                           
N3U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{S},3~{R})-2,3,5-tris(oxidanyl)-4-oxidanylidene-pentyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N3U "Create component" 2022-03-23 RCSB 
N3U "Initial release"  2022-07-20 RCSB 
# 
