data_LWU
# 
_chem_comp.id                                    LWU 
_chem_comp.name                                  "1-(2-(2-((6-(dihydroxymethyl)-2-phenylpyrimidin-4-yl)methylene)hydrazineyl)-2-oxoethyl)pyridin-1-ium" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H20 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-yl-ethanehydrazide" 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2022-07-15 
_chem_comp.pdbx_modified_date                    2023-06-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        366.394 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LWU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AEV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LWU C12 C1  C 0 1 N N N 199.914 98.651  6.867  0.034  -0.637 -1.795 C12 LWU 1  
LWU C02 C2  C 0 1 N N N 197.955 96.893  9.125  -3.342 -0.077 -0.645 C02 LWU 2  
LWU C03 C3  C 0 1 N N N 197.828 96.502  10.562 -4.695 0.016  -1.301 C03 LWU 3  
LWU C05 C4  C 0 1 Y N N 196.816 94.269  10.763 -6.021 1.509  0.033  C05 LWU 4  
LWU C06 C5  C 0 1 Y N N 195.723 93.452  10.991 -6.979 1.782  0.991  C06 LWU 5  
LWU C07 C6  C 0 1 Y N N 194.477 94.055  11.274 -7.621 0.729  1.623  C07 LWU 6  
LWU C08 C7  C 0 1 Y N N 194.346 95.460  11.318 -7.274 -0.565 1.267  C08 LWU 7  
LWU C09 C8  C 0 1 Y N N 195.459 96.258  11.079 -6.306 -0.761 0.301  C09 LWU 8  
LWU C13 C9  C 0 1 Y N N 200.234 99.148  5.497  1.370  -0.724 -1.103 C13 LWU 9  
LWU C14 C10 C 0 1 Y N N 199.290 99.257  4.463  1.891  -1.955 -0.735 C14 LWU 10 
LWU C15 C11 C 0 1 Y N N 199.743 99.787  3.221  3.124  -1.991 -0.100 C15 LWU 11 
LWU C16 C12 C 0 1 N N N 198.779 99.950  2.065  3.729  -3.306 0.318  C16 LWU 12 
LWU C20 C13 C 0 1 Y N N 201.892 100.051 4.068  3.236  0.304  -0.232 C20 LWU 13 
LWU C21 C14 C 0 1 Y N N 203.294 100.487 3.799  3.984  1.555  0.040  C21 LWU 14 
LWU C22 C15 C 0 1 Y N N 203.577 101.247 2.653  3.452  2.786  -0.341 C22 LWU 15 
LWU C23 C16 C 0 1 Y N N 204.888 101.660 2.388  4.153  3.947  -0.084 C23 LWU 16 
LWU C24 C17 C 0 1 Y N N 205.924 101.314 3.269  5.381  3.891  0.549  C24 LWU 17 
LWU C25 C18 C 0 1 Y N N 205.641 100.556 4.415  5.914  2.673  0.929  C25 LWU 18 
LWU C26 C19 C 0 1 Y N N 204.332 100.142 4.680  5.220  1.506  0.684  C26 LWU 19 
LWU N04 N1  N 1 1 Y N N 196.673 95.656  10.819 -5.716 0.265  -0.281 N04 LWU 20 
LWU N10 N2  N 0 1 N N N 198.843 97.702  8.646  -2.244 -0.303 -1.394 N10 LWU 21 
LWU N11 N3  N 0 1 N N N 198.845 98.001  7.234  -1.017 -0.388 -0.800 N11 LWU 22 
LWU N19 N4  N 0 1 Y N N 201.021 100.179 3.017  3.762  -0.857 0.133  N19 LWU 23 
LWU N27 N5  N 0 1 Y N N 201.547 99.562  5.309  2.063  0.372  -0.845 N27 LWU 24 
LWU O01 O1  O 0 1 N N N 197.001 96.284  8.338  -3.240 0.052  0.556  O01 LWU 25 
LWU O17 O2  O 0 1 N N N 197.854 98.899  2.063  4.541  -3.110 1.477  O17 LWU 26 
LWU O18 O3  O 0 1 N N N 199.498 99.937  0.814  2.686  -4.236 0.619  O18 LWU 27 
LWU H1  H1  H 0 1 N N N 200.753 97.991  7.133  0.051  0.179  -2.517 H1  LWU 28 
LWU H2  H2  H 0 1 N N N 199.935 99.546  7.506  -0.169 -1.576 -2.311 H2  LWU 29 
LWU H3  H3  H 0 1 N N N 198.736 95.956  10.859 -4.694 0.835  -2.022 H3  LWU 30 
LWU H4  H4  H 0 1 N N N 197.735 97.416  11.167 -4.915 -0.920 -1.815 H4  LWU 31 
LWU H5  H5  H 0 1 N N N 197.779 93.834  10.542 -5.519 2.324  -0.468 H5  LWU 32 
LWU H6  H6  H 0 1 N N N 195.820 92.377  10.953 -7.224 2.803  1.244  H6  LWU 33 
LWU H7  H7  H 0 1 N N N 193.614 93.433  11.459 -8.374 0.913  2.376  H7  LWU 34 
LWU H8  H8  H 0 1 N N N 193.389 95.911  11.536 -7.754 -1.410 1.740  H8  LWU 35 
LWU H9  H9  H 0 1 N N N 195.375 97.335  11.097 -6.030 -1.766 0.018  H9  LWU 36 
LWU H10 H10 H 0 1 N N N 198.264 98.952  4.604  1.348  -2.867 -0.937 H10 LWU 37 
LWU H11 H11 H 0 1 N N N 202.781 101.514 1.974  2.493  2.830  -0.836 H11 LWU 38 
LWU H12 H12 H 0 1 N N N 205.102 102.245 1.506  3.741  4.901  -0.379 H12 LWU 39 
LWU H13 H13 H 0 1 N N N 206.936 101.630 3.065  5.926  4.802  0.747  H13 LWU 40 
LWU H14 H14 H 0 1 N N N 206.437 100.291 5.095  6.874  2.635  1.423  H14 LWU 41 
LWU H15 H15 H 0 1 N N N 204.119 99.557  5.562  5.635  0.555  0.985  H15 LWU 42 
LWU H16 H16 H 0 1 N N N 199.523 98.117  9.250  -2.325 -0.406 -2.355 H16 LWU 43 
LWU H17 H17 H 0 1 N N N 198.042 98.558  7.022  -1.011 -1.097 -0.082 H17 LWU 44 
LWU H18 H18 H 0 1 N N N 197.374 98.897  2.883  4.060  -2.762 2.240  H18 LWU 45 
LWU H19 H19 H 0 1 N N N 200.129 100.647 0.804  3.003  -5.107 0.896  H19 LWU 46 
LWU H20 H20 H 0 1 N N N 198.258 100.912 2.178  4.342  -3.698 -0.494 H20 LWU 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LWU O18 C16 SING N N 1  
LWU O17 C16 SING N N 2  
LWU C16 C15 SING N N 3  
LWU C23 C22 DOUB Y N 4  
LWU C23 C24 SING Y N 5  
LWU C22 C21 SING Y N 6  
LWU N19 C15 DOUB Y N 7  
LWU N19 C20 SING Y N 8  
LWU C15 C14 SING Y N 9  
LWU C24 C25 DOUB Y N 10 
LWU C21 C20 SING N N 11 
LWU C21 C26 DOUB Y N 12 
LWU C20 N27 DOUB Y N 13 
LWU C25 C26 SING Y N 14 
LWU C14 C13 DOUB Y N 15 
LWU N27 C13 SING Y N 16 
LWU C13 C12 SING N N 17 
LWU C12 N11 SING N N 18 
LWU N11 N10 SING N N 19 
LWU O01 C02 DOUB N N 20 
LWU N10 C02 SING N N 21 
LWU C02 C03 SING N N 22 
LWU C03 N04 SING N N 23 
LWU C05 N04 DOUB Y N 24 
LWU C05 C06 SING Y N 25 
LWU N04 C09 SING Y N 26 
LWU C06 C07 DOUB Y N 27 
LWU C09 C08 DOUB Y N 28 
LWU C07 C08 SING Y N 29 
LWU C12 H1  SING N N 30 
LWU C12 H2  SING N N 31 
LWU C03 H3  SING N N 32 
LWU C03 H4  SING N N 33 
LWU C05 H5  SING N N 34 
LWU C06 H6  SING N N 35 
LWU C07 H7  SING N N 36 
LWU C08 H8  SING N N 37 
LWU C09 H9  SING N N 38 
LWU C14 H10 SING N N 39 
LWU C22 H11 SING N N 40 
LWU C23 H12 SING N N 41 
LWU C24 H13 SING N N 42 
LWU C25 H14 SING N N 43 
LWU C26 H15 SING N N 44 
LWU N10 H16 SING N N 45 
LWU N11 H17 SING N N 46 
LWU O17 H18 SING N N 47 
LWU O18 H19 SING N N 48 
LWU C16 H20 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LWU InChI            InChI                1.06  "InChI=1S/C19H19N5O3/c25-17(13-24-9-5-2-6-10-24)23-20-12-15-11-16(19(26)27)22-18(21-15)14-7-3-1-4-8-14/h1-11,19-20,26-27H,12-13H2/p+1" 
LWU InChIKey         InChI                1.06  JPVVLHGFGWJHHI-UHFFFAOYSA-O                                                                                                            
LWU SMILES_CANONICAL CACTVS               3.385 "OC(O)c1cc(CNNC(=O)C[n+]2ccccc2)nc(n1)c3ccccc3"                                                                                        
LWU SMILES           CACTVS               3.385 "OC(O)c1cc(CNNC(=O)C[n+]2ccccc2)nc(n1)c3ccccc3"                                                                                        
LWU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2nc(cc(n2)C(O)O)CNNC(=O)C[n+]3ccccc3"                                                                                      
LWU SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2nc(cc(n2)C(O)O)CNNC(=O)C[n+]3ccccc3"                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           LWU 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-ium-1-yl-ethanehydrazide" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      LWU 
_pdbx_chem_comp_synonyms.name         "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-yl-ethanehydrazide" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LWU "Create component"  2022-07-15 PDBE 
LWU "Modify descriptor" 2022-08-22 RCSB 
LWU "Initial release"   2023-06-14 RCSB 
# 
