data_KTU
#

_chem_comp.id                                   KTU
_chem_comp.name                                 "prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulopyranosidonic acid"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C11 H16 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulosidonic acid; prop-2-en-1-yl
3,5-dideoxy-D-threo-oct-5-en-2-ulosidonic acid; prop-2-en-1-yl 3,5-dideoxy-threo-oct-5-en-2-ulosidonic acid
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-10-12
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       260.241
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    KTU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4HGW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  KTU  "prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulosidonic acid"  PDB  ?  
2  KTU  "prop-2-en-1-yl 3,5-dideoxy-D-threo-oct-5-en-2-ulosidonic acid"        PDB  ?  
3  KTU  "prop-2-en-1-yl 3,5-dideoxy-threo-oct-5-en-2-ulosidonic acid"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KTU  C11   C11   C  0  1  N  N  N  -12.554   0.677  3.143   2.178   3.611  -1.336  C11   KTU   1  
KTU  C10   C10   C  0  1  N  N  N  -12.716   1.484  4.423   2.592   2.416  -0.994  C10   KTU   2  
KTU  C9    C9    C  0  1  N  N  N  -11.595   1.984  5.058   1.768   1.573  -0.055  C9    KTU   3  
KTU  O2    O2    O  0  1  N  N  N  -10.351   1.790  4.396   1.692   0.237  -0.557  O2    KTU   4  
KTU  C2    C2    C  0  1  N  N  R   -9.107   2.261  4.874   0.996  -0.668   0.303  C2    KTU   5  
KTU  C1    C1    C  0  1  N  N  N   -9.244   3.504  5.669   1.773  -0.854   1.580  C1    KTU   6  
KTU  O1A   O1A   O  0  1  N  N  N  -10.036   4.421  5.332   2.792  -0.230   1.764  O1A   KTU   7  
KTU  O1B   O1B   O  0  1  N  N  N   -8.539   3.635  6.727   1.334  -1.711   2.515  O1B   KTU   8  
KTU  C3    C3    C  0  1  N  N  N   -8.258   2.412  3.677   0.825  -2.022  -0.401  C3    KTU   9  
KTU  O6    O6    O  0  1  N  N  N   -8.508   1.213  5.735  -0.303  -0.149   0.599  O6    KTU  10  
KTU  C6    C6    C  0  1  N  N  N   -8.524  -0.072  5.073  -1.225  -0.166  -0.389  C6    KTU  11  
KTU  C7    C7    C  0  1  N  N  R   -7.758  -1.046  5.946  -2.450   0.699  -0.238  C7    KTU  12  
KTU  O7    O7    O  0  1  N  N  N   -7.320  -2.140  5.207  -2.052   2.053  -0.011  O7    KTU  13  
KTU  C8    C8    C  0  1  N  N  N   -8.627  -1.541  7.056  -3.280   0.206   0.948  C8    KTU  14  
KTU  O8    O8    O  0  1  N  N  N   -9.846  -0.876  7.314  -4.498   0.951   1.020  O8    KTU  15  
KTU  C5    C5    C  0  1  N  N  N   -7.939  -0.016  3.712  -1.109  -0.894  -1.468  C5    KTU  16  
KTU  C4    C4    C  0  1  N  N  R   -8.304   1.176  2.883   0.079  -1.785  -1.718  C4    KTU  17  
KTU  O4    O4    O  0  1  N  Y  N   -7.391   1.216  1.757  -0.365  -3.036  -2.246  O4    KTU  18  
KTU  H111  H111  H  0  0  N  N  N  -11.569   0.499  2.738   2.769   4.215  -2.008  H111  KTU  19  
KTU  H112  H112  H  0  0  N  N  N  -13.424   0.282  2.640   1.245   3.990  -0.948  H112  KTU  20  
KTU  H10   H10   H  0  1  N  N  N  -13.699   1.665  4.832   3.524   2.035  -1.385  H10   KTU  21  
KTU  H92   H92   H  0  1  N  N  N  -11.527   1.502  6.045   2.235   1.564   0.930  H92   KTU  22  
KTU  H6    H6    H  0  1  N  N  N   -8.732   4.471  7.135   1.866  -1.797   3.318  H6    KTU  23  
KTU  H31   H31   H  0  1  N  N  N   -7.221   2.611  3.986   1.804  -2.456  -0.605  H31   KTU  24  
KTU  H32   H32   H  0  1  N  N  N   -8.627   3.252  3.070   0.249  -2.695   0.233  H32   KTU  25  
KTU  H7    H7    H  0  1  N  N  N   -6.898  -0.517  6.383  -3.048   0.644  -1.148  H7    KTU  26  
KTU  HO7   HO7   H  0  1  N  N  N   -6.844  -2.735  5.774  -1.516   2.177   0.784  HO7   KTU  27  
KTU  H81   H81   H  0  1  N  N  N   -8.872  -2.590  6.832  -3.509  -0.852   0.817  H81   KTU  28  
KTU  H82   H82   H  0  1  N  N  N   -8.031  -1.493  7.979  -2.715   0.344   1.870  H82   KTU  29  
KTU  HO8   HO8   H  0  1  N  N  N  -10.289  -1.297  8.041  -5.075   0.691   1.751  HO8   KTU  30  
KTU  H5    H5    H  0  1  N  N  N   -7.286  -0.792  3.339  -1.895  -0.855  -2.207  H5    KTU  31  
KTU  H4    H4    H  0  1  N  N  N   -9.328   1.036  2.508   0.748  -1.306  -2.433  H4    KTU  32  
KTU  HO4   HO4   H  0  1  N  N  N   -7.451   0.402  1.271  -0.846  -2.962  -3.081  HO4   KTU  33  
KTU  H91   H91   H  0  1  N  N  N  -11.739   3.067  5.188   0.765   1.990   0.022  H91   KTU  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KTU  C4   C3    SING  N  N   1  
KTU  C4   C5    SING  N  N   2  
KTU  C11  C10   DOUB  N  N   3  
KTU  C3   C2    SING  N  N   4  
KTU  C5   C6    DOUB  N  N   5  
KTU  O2   C2    SING  N  N   6  
KTU  O2   C9    SING  N  N   7  
KTU  C10  C9    SING  N  N   8  
KTU  C2   C1    SING  N  N   9  
KTU  C2   O6    SING  N  N  10  
KTU  C6   O6    SING  N  N  11  
KTU  C6   C7    SING  N  N  12  
KTU  O7   C7    SING  N  N  13  
KTU  O1A  C1    DOUB  N  N  14  
KTU  C1   O1B   SING  N  N  15  
KTU  C7   C8    SING  N  N  16  
KTU  C8   O8    SING  N  N  17  
KTU  C4   O4    SING  N  N  18  
KTU  C11  H111  SING  N  N  19  
KTU  C11  H112  SING  N  N  20  
KTU  C10  H10   SING  N  N  21  
KTU  C9   H92   SING  N  N  22  
KTU  O1B  H6    SING  N  N  23  
KTU  C3   H31   SING  N  N  24  
KTU  C3   H32   SING  N  N  25  
KTU  C7   H7    SING  N  N  26  
KTU  O7   HO7   SING  N  N  27  
KTU  C8   H81   SING  N  N  28  
KTU  C8   H82   SING  N  N  29  
KTU  O8   HO8   SING  N  N  30  
KTU  C5   H5    SING  N  N  31  
KTU  C4   H4    SING  N  N  32  
KTU  O4   HO4   SING  N  N  33  
KTU  C9   H91   SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KTU  SMILES            ACDLabs               12.01  "C=C\COC1(C(O)=O)OC(C(CO)O)=CC(C1)O"  
KTU  InChI             InChI                 1.03   "InChI=1S/C11H16O7/c1-2-3-17-11(10(15)16)5-7(13)4-9(18-11)8(14)6-12/h2,4,7-8,12-14H,1,3,5-6H2,(H,15,16)/t7-,8+,11+/m0/s1"  
KTU  InChIKey          InChI                 1.03   SDKKPKVWEQUWPM-VAOFZXAKSA-N  
KTU  SMILES_CANONICAL  CACTVS                3.385  "OC[C@@H](O)C1=C[C@H](O)C[C@@](OCC=C)(O1)C(O)=O"  
KTU  SMILES            CACTVS                3.385  "OC[CH](O)C1=C[CH](O)C[C](OCC=C)(O1)C(O)=O"  
KTU  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C=CCO[C@@]1(C[C@H](C=C(O1)[C@@H](CO)O)O)C(=O)O"  
KTU  SMILES            "OpenEye OEToolkits"  2.0.7  "C=CCOC1(CC(C=C(O1)C(CO)O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KTU  "SYSTEMATIC NAME"  ACDLabs               12.01  "prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulopyranosidonic acid"  
KTU  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R},4~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-4-oxidanyl-2-prop-2-enoxy-3,4-dihydropyran-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
KTU  "CARBOHYDRATE ISOMER"                  D             PDB  ?  
KTU  "CARBOHYDRATE RING"                    dihydropyran  PDB  ?  
KTU  "CARBOHYDRATE ANOMER"                  alpha         PDB  ?  
KTU  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  ketose        PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KTU  "Create component"    2012-10-12  RCSB  
KTU  "Initial release"     2013-01-04  RCSB  
KTU  "Other modification"  2020-04-12  RCSB  
KTU  "Other modification"  2020-07-03  RCSB  
KTU  "Modify synonyms"     2020-07-17  RCSB  
##
