data_DZU
#

_chem_comp.id                                   DZU
_chem_comp.name                                 "8-[(E)-2-[5-methyl-1-[3-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]benzimidazol-2-yl]ethenyl]quinoline"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C33 H35 N5 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-26
_chem_comp.pdbx_modified_date                   2020-09-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       517.664
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DZU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6KZE
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DZU  C3   C1   C  0  1  Y  N  N  18.412   2.754  -17.712  -3.972  -5.065   0.107  C3   DZU   1  
DZU  C4   C2   C  0  1  Y  N  N  19.578   3.377  -18.214  -4.305  -3.715  -0.164  C4   DZU   2  
DZU  C11  C3   C  0  1  N  N  N  21.044   3.989  -20.149  -3.646  -1.257  -0.057  C11  DZU   3  
DZU  C39  C4   C  0  1  N  N  N  14.730   0.611  -25.152  10.173   0.185  -1.089  C39  DZU   4  
DZU  N36  N1   N  0  1  N  N  N  15.105   1.963  -25.580   9.462  -1.062  -1.404  N36  DZU   5  
DZU  C35  C5   C  0  1  N  N  N  15.450   2.798  -24.430   8.231  -0.790  -2.158  C35  DZU   6  
DZU  C34  C6   C  0  1  N  N  N  15.979   4.150  -24.880   7.264   0.008  -1.281  C34  DZU   7  
DZU  C37  C7   C  0  1  N  N  N  14.018   2.590  -26.330   9.171  -1.825  -0.183  C37  DZU   8  
DZU  C38  C8   C  0  1  N  N  N  14.316   4.057  -26.593   8.204  -1.027   0.695  C38  DZU   9  
DZU  N33  N2   N  0  1  N  N  N  15.725   4.341  -26.315   6.972  -0.755  -0.059  N33  DZU  10  
DZU  C32  C9   C  0  1  N  N  N  16.126   5.674  -26.784   5.987  -0.055   0.776  C32  DZU  11  
DZU  C31  C10  C  0  1  N  N  N  17.268   5.634  -27.795   4.642  -0.011   0.049  C31  DZU  12  
DZU  C30  C11  C  0  1  N  N  N  18.181   6.831  -27.687   3.615   0.718   0.919  C30  DZU  13  
DZU  O29  O1   O  0  1  N  N  N  19.431   6.435  -27.097   2.359   0.760   0.240  O29  DZU  14  
DZU  C27  C12  C  0  1  Y  N  N  19.575   6.529  -25.732   1.332   1.377   0.880  C27  DZU  15  
DZU  C26  C13  C  0  1  Y  N  N  18.508   6.941  -24.959   1.531   1.936   2.135  C26  DZU  16  
DZU  C25  C14  C  0  1  Y  N  N  18.682   7.101  -23.601   0.488   2.565   2.787  C25  DZU  17  
DZU  C24  C15  C  0  1  Y  N  N  19.902   6.838  -23.010  -0.757   2.638   2.193  C24  DZU  18  
DZU  C28  C16  C  0  1  Y  N  N  20.811   6.263  -25.158   0.085   1.453   0.279  C28  DZU  19  
DZU  C23  C17  C  0  1  Y  N  N  20.972   6.398  -23.777  -0.963   2.080   0.938  C23  DZU  20  
DZU  N14  N3   N  0  1  Y  N  N  22.120   5.801  -23.142  -2.223   2.160   0.333  N14  DZU  21  
DZU  C15  C18  C  0  1  Y  N  N  23.424   5.806  -23.658  -2.869   3.313  -0.076  C15  DZU  22  
DZU  C18  C19  C  0  1  Y  N  N  23.963   6.239  -24.859  -2.544   4.661  -0.041  C18  DZU  23  
DZU  C19  C20  C  0  1  Y  N  N  25.330   6.100  -25.048  -3.429   5.591  -0.544  C19  DZU  24  
DZU  C20  C21  C  0  1  Y  N  N  26.158   5.542  -24.073  -4.642   5.188  -1.084  C20  DZU  25  
DZU  C22  C22  C  0  1  N  N  N  27.641   5.392  -24.318  -5.596   6.220  -1.629  C22  DZU  26  
DZU  C21  C23  C  0  1  Y  N  N  25.587   5.122  -22.875  -4.981   3.865  -1.127  C21  DZU  27  
DZU  C16  C24  C  0  1  Y  N  N  24.223   5.251  -22.660  -4.099   2.903  -0.623  C16  DZU  28  
DZU  N17  N4   N  0  1  Y  N  N  23.451   4.911  -21.547  -4.154   1.559  -0.529  N17  DZU  29  
DZU  C13  C25  C  0  1  Y  N  N  22.210   5.237  -21.874  -3.052   1.106   0.028  C13  DZU  30  
DZU  C12  C26  C  0  1  N  N  N  21.032   4.896  -21.103  -2.754  -0.305   0.287  C12  DZU  31  
DZU  C10  C27  C  0  1  Y  N  N  19.861   3.324  -19.608  -3.348  -2.671   0.203  C10  DZU  32  
DZU  N5   N5   N  0  1  Y  N  N  20.470   4.024  -17.410  -5.468  -3.417  -0.741  N5   DZU  33  
DZU  C6   C28  C  0  1  Y  N  N  20.207   4.063  -16.116  -6.326  -4.354  -1.071  C6   DZU  34  
DZU  C1   C29  C  0  1  Y  N  N  19.089   3.497  -15.532  -6.064  -5.701  -0.834  C1   DZU  35  
DZU  C9   C30  C  0  1  Y  N  N  18.989   2.649  -20.438  -2.150  -3.045   0.803  C9   DZU  36  
DZU  C8   C31  C  0  1  Y  N  N  17.855   2.029  -19.944  -1.869  -4.381   1.048  C8   DZU  37  
DZU  C7   C32  C  0  1  Y  N  N  17.563   2.077  -18.614  -2.742  -5.371   0.710  C7   DZU  38  
DZU  C2   C33  C  0  1  Y  N  N  18.193   2.846  -16.324  -4.889  -6.074  -0.244  C2   DZU  39  
DZU  H1   H1   H  0  1  N  N  N  22.003   3.715  -19.734  -4.580  -0.979  -0.523  H1   DZU  40  
DZU  H2   H2   H  0  1  N  N  N  15.561   0.160  -24.591   9.530   0.828  -0.488  H2   DZU  41  
DZU  H3   H3   H  0  1  N  N  N  13.839   0.664  -24.509  11.080  -0.045  -0.531  H3   DZU  42  
DZU  H4   H4   H  0  1  N  N  N  14.508  -0.005  -26.036  10.436   0.697  -2.015  H4   DZU  43  
DZU  H6   H6   H  0  1  N  N  N  14.552   2.950  -23.813   8.471  -0.213  -3.052  H6   DZU  44  
DZU  H7   H7   H  0  1  N  N  N  16.222   2.289  -23.834   7.766  -1.733  -2.448  H7   DZU  45  
DZU  H8   H8   H  0  1  N  N  N  17.062   4.197  -24.693   7.718   0.962  -1.014  H8   DZU  46  
DZU  H9   H9   H  0  1  N  N  N  15.474   4.945  -24.312   6.338   0.186  -1.828  H9   DZU  47  
DZU  H10  H10  H  0  1  N  N  N  13.087   2.510  -25.750   8.717  -2.779  -0.449  H10  DZU  48  
DZU  H11  H11  H  0  1  N  N  N  13.897   2.069  -27.291  10.097  -2.003   0.365  H11  DZU  49  
DZU  H12  H12  H  0  1  N  N  N  14.099   4.289  -27.646   7.963  -1.604   1.589  H12  DZU  50  
DZU  H13  H13  H  0  1  N  N  N  13.684   4.679  -25.942   8.668  -0.084   0.985  H13  DZU  51  
DZU  H15  H15  H  0  1  N  N  N  16.447   6.269  -25.916   5.871  -0.584   1.722  H15  DZU  52  
DZU  H16  H16  H  0  1  N  N  N  15.257   6.155  -27.256   6.330   0.961   0.968  H16  DZU  53  
DZU  H17  H17  H  0  1  N  N  N  16.841   5.607  -28.808   4.757   0.518  -0.897  H17  DZU  54  
DZU  H18  H18  H  0  1  N  N  N  17.860   4.723  -27.622   4.299  -1.028  -0.143  H18  DZU  55  
DZU  H19  H19  H  0  1  N  N  N  18.364   7.243  -28.690   3.500   0.189   1.865  H19  DZU  56  
DZU  H20  H20  H  0  1  N  N  N  17.706   7.598  -27.057   3.959   1.735   1.111  H20  DZU  57  
DZU  H21  H21  H  0  1  N  N  N  17.548   7.136  -25.413   2.503   1.880   2.602  H21  DZU  58  
DZU  H22  H22  H  0  1  N  N  N  17.855   7.436  -22.992   0.646   2.999   3.763  H22  DZU  59  
DZU  H23  H23  H  0  1  N  N  N  20.024   6.975  -21.946  -1.572   3.130   2.705  H23  DZU  60  
DZU  H24  H24  H  0  1  N  N  N  21.642   5.954  -25.775  -0.071   1.022  -0.699  H24  DZU  61  
DZU  H25  H25  H  0  1  N  N  N  23.337   6.672  -25.625  -1.601   4.981   0.378  H25  DZU  62  
DZU  H26  H26  H  0  1  N  N  N  25.767   6.434  -25.978  -3.177   6.641  -0.518  H26  DZU  63  
DZU  H27  H27  H  0  1  N  N  N  28.163   6.297  -23.973  -5.387   6.386  -2.686  H27  DZU  64  
DZU  H28  H28  H  0  1  N  N  N  28.017   4.518  -23.766  -6.620   5.865  -1.513  H28  DZU  65  
DZU  H29  H29  H  0  1  N  N  N  27.822   5.252  -25.394  -5.471   7.155  -1.083  H29  DZU  66  
DZU  H30  H30  H  0  1  N  N  N  26.212   4.692  -22.106  -5.928   3.563  -1.549  H30  DZU  67  
DZU  H31  H31  H  0  1  N  N  N  20.106   5.407  -21.320  -1.820  -0.583   0.753  H31  DZU  68  
DZU  H32  H32  H  0  1  N  N  N  20.911   4.570  -15.473  -7.259  -4.074  -1.537  H32  DZU  69  
DZU  H33  H33  H  0  1  N  N  N  18.929   3.570  -14.466  -6.789  -6.450  -1.115  H33  DZU  70  
DZU  H34  H34  H  0  1  N  N  N  19.196   2.604  -21.497  -1.434  -2.287   1.085  H34  DZU  71  
DZU  H35  H35  H  0  1  N  N  N  17.196   1.503  -20.618  -0.931  -4.644   1.515  H35  DZU  72  
DZU  H36  H36  H  0  1  N  N  N  16.671   1.591  -18.246  -2.489  -6.400   0.916  H36  DZU  73  
DZU  H37  H37  H  0  1  N  N  N  17.312   2.399  -15.887  -4.670  -7.114  -0.052  H37  DZU  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DZU  C31  C30  SING  N  N   1  
DZU  C31  C32  SING  N  N   2  
DZU  C30  O29  SING  N  N   3  
DZU  O29  C27  SING  N  N   4  
DZU  C32  N33  SING  N  N   5  
DZU  C38  C37  SING  N  N   6  
DZU  C38  N33  SING  N  N   7  
DZU  C37  N36  SING  N  N   8  
DZU  N33  C34  SING  N  N   9  
DZU  C27  C28  DOUB  Y  N  10  
DZU  C27  C26  SING  Y  N  11  
DZU  N36  C39  SING  N  N  12  
DZU  N36  C35  SING  N  N  13  
DZU  C28  C23  SING  Y  N  14  
DZU  C19  C18  DOUB  Y  N  15  
DZU  C19  C20  SING  Y  N  16  
DZU  C26  C25  DOUB  Y  N  17  
DZU  C34  C35  SING  N  N  18  
DZU  C18  C15  SING  Y  N  19  
DZU  C22  C20  SING  N  N  20  
DZU  C20  C21  DOUB  Y  N  21  
DZU  C23  N14  SING  N  N  22  
DZU  C23  C24  DOUB  Y  N  23  
DZU  C15  N14  SING  Y  N  24  
DZU  C15  C16  DOUB  Y  N  25  
DZU  C25  C24  SING  Y  N  26  
DZU  N14  C13  SING  Y  N  27  
DZU  C21  C16  SING  Y  N  28  
DZU  C16  N17  SING  Y  N  29  
DZU  C13  N17  DOUB  Y  N  30  
DZU  C13  C12  SING  N  N  31  
DZU  C12  C11  DOUB  N  E  32  
DZU  C9   C8   DOUB  Y  N  33  
DZU  C9   C10  SING  Y  N  34  
DZU  C11  C10  SING  N  N  35  
DZU  C8   C7   SING  Y  N  36  
DZU  C10  C4   DOUB  Y  N  37  
DZU  C7   C3   DOUB  Y  N  38  
DZU  C4   C3   SING  Y  N  39  
DZU  C4   N5   SING  Y  N  40  
DZU  C3   C2   SING  Y  N  41  
DZU  N5   C6   DOUB  Y  N  42  
DZU  C2   C1   DOUB  Y  N  43  
DZU  C6   C1   SING  Y  N  44  
DZU  C11  H1   SING  N  N  45  
DZU  C39  H2   SING  N  N  46  
DZU  C39  H3   SING  N  N  47  
DZU  C39  H4   SING  N  N  48  
DZU  C35  H6   SING  N  N  49  
DZU  C35  H7   SING  N  N  50  
DZU  C34  H8   SING  N  N  51  
DZU  C34  H9   SING  N  N  52  
DZU  C37  H10  SING  N  N  53  
DZU  C37  H11  SING  N  N  54  
DZU  C38  H12  SING  N  N  55  
DZU  C38  H13  SING  N  N  56  
DZU  C32  H15  SING  N  N  57  
DZU  C32  H16  SING  N  N  58  
DZU  C31  H17  SING  N  N  59  
DZU  C31  H18  SING  N  N  60  
DZU  C30  H19  SING  N  N  61  
DZU  C30  H20  SING  N  N  62  
DZU  C26  H21  SING  N  N  63  
DZU  C25  H22  SING  N  N  64  
DZU  C24  H23  SING  N  N  65  
DZU  C28  H24  SING  N  N  66  
DZU  C18  H25  SING  N  N  67  
DZU  C19  H26  SING  N  N  68  
DZU  C22  H27  SING  N  N  69  
DZU  C22  H28  SING  N  N  70  
DZU  C22  H29  SING  N  N  71  
DZU  C21  H30  SING  N  N  72  
DZU  C12  H31  SING  N  N  73  
DZU  C6   H32  SING  N  N  74  
DZU  C1   H33  SING  N  N  75  
DZU  C9   H34  SING  N  N  76  
DZU  C8   H35  SING  N  N  77  
DZU  C7   H36  SING  N  N  78  
DZU  C2   H37  SING  N  N  79  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DZU  InChI             InChI                 1.03   "InChI=1S/C33H35N5O/c1-25-12-14-31-30(23-25)35-32(15-13-27-8-3-7-26-9-5-16-34-33(26)27)38(31)28-10-4-11-29(24-28)39-22-6-17-37-20-18-36(2)19-21-37/h3-5,7-16,23-24H,6,17-22H2,1-2H3/b15-13+"  
DZU  InChIKey          InChI                 1.03   KQVBPBWJTADBHJ-FYWRMAATSA-N  
DZU  SMILES_CANONICAL  CACTVS                3.385  "CN1CCN(CCCOc2cccc(c2)n3c(\C=C\c4cccc5cccnc45)nc6cc(C)ccc36)CC1"  
DZU  SMILES            CACTVS                3.385  "CN1CCN(CCCOc2cccc(c2)n3c(C=Cc4cccc5cccnc45)nc6cc(C)ccc36)CC1"  
DZU  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc2c(c1)nc(n2c3cccc(c3)OCCCN4CCN(CC4)C)/C=C/c5cccc6c5nccc6"  
DZU  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc2c(c1)nc(n2c3cccc(c3)OCCCN4CCN(CC4)C)C=Cc5cccc6c5nccc6"  
#
_pdbx_chem_comp_identifier.comp_id          DZU
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "8-[(~{E})-2-[5-methyl-1-[3-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]benzimidazol-2-yl]ethenyl]quinoline"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DZU  "Create component"  2019-09-26  PDBJ  
DZU  "Initial release"   2020-09-30  RCSB  
##
