data_CZU
#

_chem_comp.id                                   CZU
_chem_comp.name                                 "[[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H15 N4 O14 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Inosine-5'-triphosphate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-24
_chem_comp.pdbx_modified_date                   2022-03-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       508.166
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CZU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6K49
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CZU  C2     C1   C  0  1  N  N  N  57.206  48.692  -21.690   7.273   1.573  -1.681  C2     CZU   1  
CZU  C4     C2   C  0  1  Y  N  N  54.883  48.560  -22.172   5.528   0.895  -0.337  C4     CZU   2  
CZU  C5     C3   C  0  1  Y  N  N  54.909  47.263  -21.821   6.051   1.621   0.737  C5     CZU   3  
CZU  C6     C4   C  0  1  N  N  N  56.035  46.673  -21.418   7.256   2.342   0.540  C6     CZU   4  
CZU  O6     O1   O  0  1  N  N  N  56.036  45.483  -21.104   7.752   2.991   1.445  O6     CZU   5  
CZU  "C1'"  C5   C  0  1  N  N  R  52.958  50.074  -23.006   3.487  -0.564  -0.641  "C1'"  CZU   6  
CZU  "C2'"  C6   C  0  1  N  N  R  52.310  49.887  -24.349   3.950  -2.035  -0.549  "C2'"  CZU   7  
CZU  "C3'"  C7   C  0  1  N  N  S  51.407  51.102  -24.357   2.633  -2.840  -0.484  "C3'"  CZU   8  
CZU  "C4'"  C8   C  0  1  N  N  R  50.903  51.062  -22.895   1.530  -1.760  -0.544  "C4'"  CZU   9  
CZU  "C5'"  C9   C  0  1  N  N  N  49.522  50.424  -22.669   0.358  -2.145   0.361  "C5'"  CZU  10  
CZU  C8     C10  C  0  1  Y  N  N  52.896  47.755  -22.400   4.236   0.665   1.431  C8     CZU  11  
CZU  N1     N1   N  0  1  N  N  N  57.221  47.413  -21.348   7.834   2.299  -0.681  N1     CZU  12  
CZU  N3     N2   N  0  1  N  N  N  56.009  49.292  -22.115   6.168   0.901  -1.515  N3     CZU  13  
CZU  N7     N3   N  0  1  Y  N  N  53.679  46.770  -21.960   5.218   1.442   1.788  N7     CZU  14  
CZU  N9     N4   N  0  1  Y  N  N  53.631  48.857  -22.535   4.386   0.302   0.126  N9     CZU  15  
CZU  O1A    O2   O  0  1  N  N  N  49.829  47.452  -24.760  -2.704  -2.617   0.775  O1A    CZU  16  
CZU  O1B    O3   O  0  1  N  N  N  49.020  48.166  -27.113  -5.396  -1.162   0.508  O1B    CZU  17  
CZU  O1G    O4   O  0  1  N  N  N  45.407  46.137  -29.428  -7.458   0.343  -1.199  O1G    CZU  18  
CZU  "O2'"  O5   O  0  1  N  N  N  53.265  49.937  -25.432   4.704  -2.396  -1.708  "O2'"  CZU  19  
CZU  O2A    O6   O  0  1  N  N  N  48.444  47.696  -22.599  -1.816  -1.093   2.580  O2A    CZU  20  
CZU  O2B    O7   O  0  1  N  N  N  48.089  45.920  -26.325  -4.973   0.766   2.081  O2B    CZU  21  
CZU  O2G    O8   O  0  1  N  N  N  45.000  45.326  -27.049  -7.292   2.620  -0.123  O2G    CZU  22  
CZU  "O3'"  O9   O  0  1  N  N  N  52.235  52.245  -24.556   2.530  -3.724  -1.602  "O3'"  CZU  23  
CZU  O3A    O10  O  0  1  N  N  N  47.432  48.111  -25.016  -3.089  -0.139   0.487  O3A    CZU  24  
CZU  O3B    O11  O  0  1  N  N  N  46.406  47.689  -27.489  -5.160   1.133  -0.515  O3B    CZU  25  
CZU  O3G    O12  O  0  1  N  N  N  43.804  47.478  -27.955  -6.419   2.193  -2.565  O3G    CZU  26  
CZU  "O4'"  O13  O  0  1  N  N  N  51.754  50.083  -22.267   2.165  -0.557  -0.060  "O4'"  CZU  27  
CZU  "O5'"  O14  O  0  1  N  N  N  49.013  49.816  -23.859  -0.698  -1.195   0.203  "O5'"  CZU  28  
CZU  PA     P1   P  0  1  N  N  N  48.645  48.259  -23.936  -2.090  -1.290   1.006  PA     CZU  29  
CZU  PB     P2   P  0  1  N  N  N  47.752  47.367  -26.478  -4.670   0.121   0.637  PB     CZU  30  
CZU  PG     P3   P  0  1  N  N  N  45.082  46.712  -27.941  -6.601   1.546  -1.103  PG     CZU  31  
CZU  H1     H1   H  0  1  N  N  N  58.114  49.274  -21.642   7.755   1.556  -2.647  H1     CZU  32  
CZU  H2     H2   H  0  1  N  N  N  53.566  50.988  -22.930   3.446  -0.242  -1.681  H2     CZU  33  
CZU  H3     H3   H  0  1  N  N  N  51.716  48.961  -24.372   4.540  -2.194   0.354  H3     CZU  34  
CZU  H4     H4   H  0  1  N  N  N  50.584  51.012  -25.081   2.572  -3.397   0.451  H4     CZU  35  
CZU  H5     H5   H  0  1  N  N  N  50.969  52.053  -22.423   1.187  -1.624  -1.570  H5     CZU  36  
CZU  H6     H6   H  0  1  N  N  N  48.820  51.204  -22.340  -0.002  -3.137   0.088  H6     CZU  37  
CZU  H7     H7   H  0  1  N  N  N  49.609  49.656  -21.887   0.688  -2.152   1.400  H7     CZU  38  
CZU  H8     H8   H  0  1  N  N  N  51.840  47.673  -22.612   3.425   0.355   2.073  H8     CZU  39  
CZU  H10    H10  H  0  1  N  N  N  53.818  49.165  -25.403   5.020  -3.310  -1.703  H10    CZU  40  
CZU  H11    H11  H  0  1  N  N  N  49.041  46.969  -22.468  -1.414  -0.243   2.806  H11    CZU  41  
CZU  H12    H12  H  0  1  N  N  N  48.975  45.767  -26.631  -4.529   1.611   2.236  H12    CZU  42  
CZU  H13    H13  H  0  1  N  N  N  45.158  44.577  -27.612  -6.785   3.435  -0.012  H13    CZU  43  
CZU  H14    H14  H  0  1  N  N  N  51.697  53.028  -24.566   3.234  -4.385  -1.647  H14    CZU  44  
CZU  H15    H15  H  0  1  N  N  N  43.441  47.473  -28.833  -7.248   2.466  -2.981  H15    CZU  45  
CZU  H16    H16  H  0  1  N  N  N  58.070  46.981  -21.043   8.655   2.790  -0.843  H16    CZU  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CZU  O1G    PG     DOUB  N  N   1  
CZU  O3G    PG     SING  N  N   2  
CZU  PG     O3B    SING  N  N   3  
CZU  PG     O2G    SING  N  N   4  
CZU  O3B    PB     SING  N  N   5  
CZU  O1B    PB     DOUB  N  N   6  
CZU  PB     O2B    SING  N  N   7  
CZU  PB     O3A    SING  N  N   8  
CZU  "O2'"  "C2'"  SING  N  N   9  
CZU  O3A    PA     SING  N  N  10  
CZU  O1A    PA     DOUB  N  N  11  
CZU  "O3'"  "C3'"  SING  N  N  12  
CZU  "C3'"  "C2'"  SING  N  N  13  
CZU  "C3'"  "C4'"  SING  N  N  14  
CZU  "C2'"  "C1'"  SING  N  N  15  
CZU  PA     "O5'"  SING  N  N  16  
CZU  PA     O2A    SING  N  N  17  
CZU  "O5'"  "C5'"  SING  N  N  18  
CZU  "C1'"  N9     SING  N  N  19  
CZU  "C1'"  "O4'"  SING  N  N  20  
CZU  "C4'"  "C5'"  SING  N  N  21  
CZU  "C4'"  "O4'"  SING  N  N  22  
CZU  N9     C8     SING  Y  N  23  
CZU  N9     C4     SING  Y  N  24  
CZU  C8     N7     DOUB  Y  N  25  
CZU  C4     N3     SING  N  N  26  
CZU  C4     C5     DOUB  Y  N  27  
CZU  N3     C2     DOUB  N  N  28  
CZU  N7     C5     SING  Y  N  29  
CZU  C5     C6     SING  N  N  30  
CZU  C2     N1     SING  N  N  31  
CZU  C6     N1     SING  N  N  32  
CZU  C6     O6     DOUB  N  N  33  
CZU  C2     H1     SING  N  N  34  
CZU  "C1'"  H2     SING  N  N  35  
CZU  "C2'"  H3     SING  N  N  36  
CZU  "C3'"  H4     SING  N  N  37  
CZU  "C4'"  H5     SING  N  N  38  
CZU  "C5'"  H6     SING  N  N  39  
CZU  "C5'"  H7     SING  N  N  40  
CZU  C8     H8     SING  N  N  41  
CZU  "O2'"  H10    SING  N  N  42  
CZU  O2A    H11    SING  N  N  43  
CZU  O2B    H12    SING  N  N  44  
CZU  O2G    H13    SING  N  N  45  
CZU  "O3'"  H14    SING  N  N  46  
CZU  O3G    H15    SING  N  N  47  
CZU  N1     H16    SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CZU  InChI             InChI                 1.03   "InChI=1S/C10H15N4O14P3/c15-6-4(1-25-30(21,22)28-31(23,24)27-29(18,19)20)26-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,23,24)(H,11,12,17)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1"  
CZU  InChIKey          InChI                 1.03   HAEJPQIATWHALX-KQYNXXCUSA-N  
CZU  SMILES_CANONICAL  CACTVS                3.385  "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)n2cnc3C(=O)NC=Nc23"  
CZU  SMILES            CACTVS                3.385  "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)n2cnc3C(=O)NC=Nc23"  
CZU  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=CNC2=O"  
CZU  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=CNC2=O"  
#
_pdbx_chem_comp_identifier.comp_id          CZU
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CZU
_pdbx_chem_comp_synonyms.name        "Inosine-5'-triphosphate"
_pdbx_chem_comp_synonyms.provenance  AUTHOR
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CZU  "Create component"  2019-05-24  PDBJ  
CZU  "Modify synonyms"   2022-03-23  PDBJ  
CZU  "Initial release"   2022-03-30  RCSB  
##
