data_A2U
# 
_chem_comp.id                                    A2U 
_chem_comp.name                                  S-Ethyl-CoA 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H40 N7 O16 P3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-17 
_chem_comp.pdbx_modified_date                    2024-04-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        795.587 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A2U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PTZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A2U C10 C1  C 0 1 N N N N N N 207.481 201.128 201.658 7.389  -1.795 0.382  C10 A2U 1  
A2U C17 C2  C 0 1 N N N N N N 211.473 201.076 200.091 3.796  -2.185 2.214  C17 A2U 2  
A2U C01 C3  C 0 1 N N N N N N 208.123 209.031 198.043 13.308 6.614  -0.534 C01 A2U 3  
A2U C02 C4  C 0 1 N N N N N N 207.783 208.641 199.476 12.337 5.742  0.264  C02 A2U 4  
A2U C04 C5  C 0 1 N N N N N N 207.324 206.316 201.268 10.752 3.389  0.378  C04 A2U 5  
A2U C05 C6  C 0 1 N N N N N N 207.778 204.859 201.611 10.276 2.111  -0.315 C05 A2U 6  
A2U C07 C7  C 0 1 N N N N N N 206.406 203.095 202.854 8.809  0.226  0.166  C07 A2U 7  
A2U C09 C8  C 0 1 N N N N N N 206.370 202.222 201.608 7.865  -0.517 1.076  C09 A2U 8  
A2U C12 C9  C 0 1 N N N N N N 209.909 201.238 202.472 5.922  -3.680 0.863  C12 A2U 9  
A2U C14 C10 C 0 1 N N R N N N 211.294 201.978 202.466 4.902  -4.373 1.731  C14 A2U 10 
A2U C16 C11 C 0 1 N N N N N N 212.262 201.430 201.402 3.581  -3.603 1.679  C16 A2U 11 
A2U C18 C12 C 0 1 N N N N N N 213.326 202.501 201.083 2.539  -4.320 2.540  C18 A2U 12 
A2U C19 C13 C 0 1 N N N N N N 212.948 200.149 201.934 3.087  -3.533 0.233  C19 A2U 13 
A2U C29 C14 C 0 1 N N N N N N 218.269 201.224 205.165 -4.261 -1.033 -0.999 C29 A2U 14 
A2U C30 C15 C 0 1 N N R N N N 217.716 202.005 206.366 -5.075 -0.550 0.204  C30 A2U 15 
A2U C32 C16 C 0 1 N N S N N N 215.347 202.535 206.041 -5.586 1.681  -0.148 C32 A2U 16 
A2U C34 C17 C 0 1 Y N N N N N 212.836 202.715 205.982 -5.229 3.271  1.778  C34 A2U 17 
A2U C36 C18 C 0 1 Y N N N N N 212.437 204.558 207.059 -5.899 5.151  0.930  C36 A2U 18 
A2U C37 C19 C 0 1 Y N N N N N 211.936 205.712 207.715 -6.270 6.470  0.618  C37 A2U 19 
A2U C40 C20 C 0 1 Y N N N N N 214.095 206.324 208.236 -6.869 5.765  -1.497 C40 A2U 20 
A2U C42 C21 C 0 1 Y N N N N N 213.795 204.359 207.028 -6.050 4.167  -0.062 C42 A2U 21 
A2U C43 C22 C 0 1 N N R N N N 215.462 201.684 207.113 -6.961 0.976  -0.028 C43 A2U 22 
A2U C45 C23 C 0 1 N N S N N N 217.018 201.204 207.152 -6.573 -0.517 -0.157 C45 A2U 23 
A2U N06 N1  N 0 1 N N N N N N 207.106 204.383 202.834 9.358  1.389  0.569  N06 A2U 24 
A2U N11 N2  N 0 1 N N N N N N 208.783 201.785 201.674 6.470  -2.517 1.267  N11 A2U 25 
A2U N33 N3  N 0 1 Y N N N N N 214.016 203.188 206.360 -5.620 2.993  0.502  N33 A2U 26 
A2U N35 N4  N 0 1 Y N N N N N 211.860 203.528 206.400 -5.393 4.538  2.027  N35 A2U 27 
A2U N38 N5  N 0 1 N N N N N N 210.487 205.971 207.769 -6.143 7.482  1.554  N38 A2U 28 
A2U N39 N6  N 0 1 Y N N N N N 212.788 206.556 208.283 -6.745 6.724  -0.597 N39 A2U 29 
A2U N41 N7  N 0 1 Y N N N N N 214.610 205.249 207.627 -6.535 4.516  -1.249 N41 A2U 30 
A2U O08 O1  O 0 1 N N N N N N 205.867 202.721 203.849 9.075  -0.223 -0.929 O08 A2U 31 
A2U O13 O2  O 0 1 N N N N N N 209.766 200.239 203.113 6.248  -4.169 -0.197 O13 A2U 32 
A2U O15 O3  O 0 1 N N N N N N 211.047 203.353 202.174 4.696  -5.704 1.253  O15 A2U 33 
A2U O20 O4  O 0 1 N N N N N N 214.275 200.475 202.314 1.853  -2.814 0.185  O20 A2U 34 
A2U O22 O5  O 0 1 N N N N N N 216.002 198.522 202.157 1.921  -1.600 -2.146 O22 A2U 35 
A2U O23 O6  O 0 1 N N N N N N 215.084 199.455 200.061 0.787  -3.837 -1.861 O23 A2U 36 
A2U O24 O7  O 0 1 N N N N N N 216.796 200.878 201.394 -0.354 -1.827 -0.848 O24 A2U 37 
A2U O26 O8  O 0 1 N N N N N N 218.831 202.229 202.177 -2.134 -2.962 -2.231 O26 A2U 38 
A2U O27 O9  O 0 1 N N N N N N 218.862 199.800 202.530 -1.568 -0.572 -2.813 O27 A2U 39 
A2U O28 O10 O 0 1 N N N N N N 217.358 201.269 204.068 -2.890 -1.171 -0.621 O28 A2U 40 
A2U O31 O11 O 0 1 N N N N N N 216.725 203.172 205.905 -4.689 0.790  0.549  O31 A2U 41 
A2U O44 O12 O 0 1 N N N N N N 215.171 202.315 208.339 -7.559 1.239  1.243  O44 A2U 42 
A2U O46 O13 O 0 1 N N N N N N 217.526 201.290 208.483 -7.326 -1.311 0.762  O46 A2U 43 
A2U O48 O14 O 0 1 N N N N N N 219.384 200.666 210.169 -9.021 -3.149 1.575  O48 A2U 44 
A2U O49 O15 O 0 1 N N N N N N 219.616 199.917 207.821 -9.168 -2.158 -0.742 O49 A2U 45 
A2U O50 O16 O 0 1 N N N N N N 219.900 202.298 208.396 -7.245 -3.725 -0.276 O50 A2U 46 
A2U P21 P1  P 0 1 N N N N N N 215.543 199.786 201.468 1.046  -2.548 -1.183 P21 A2U 47 
A2U P25 P2  P 0 1 N N N N N N 217.998 201.030 202.534 -1.745 -1.662 -1.641 P25 A2U 48 
A2U P47 P3  P 0 1 N N N N N N 219.142 201.040 208.721 -8.211 -2.577 0.307  P47 A2U 49 
A2U S03 S1  S 0 1 N N N N N N 208.150 206.876 199.732 11.889 4.283  -0.716 S03 A2U 50 
A2U H1  H1  H 0 1 N N N N N N 207.362 200.520 202.567 6.874  -1.537 -0.543 H1  A2U 51 
A2U H2  H2  H 0 1 N N N N N N 207.404 200.481 200.772 8.247  -2.427 0.156  H2  A2U 52 
A2U H3  H3  H 0 1 N N N N N N 210.713 200.313 200.314 2.834  -1.680 2.301  H3  A2U 53 
A2U H4  H4  H 0 1 N N N N N N 210.981 201.980 199.704 4.271  -2.235 3.194  H4  A2U 54 
A2U H5  H5  H 0 1 N N N N N N 212.172 200.687 199.336 4.436  -1.632 1.527  H5  A2U 55 
A2U H6  H6  H 0 1 N N N N N N 207.901 210.097 197.890 14.206 6.041  -0.763 H6  A2U 56 
A2U H7  H7  H 0 1 N N N N N N 209.192 208.849 197.857 12.833 6.932  -1.462 H7  A2U 57 
A2U H8  H8  H 0 1 N N N N N N 207.522 208.428 197.347 13.577 7.491  0.055  H8  A2U 58 
A2U H9  H9  H 0 1 N N N N N N 208.384 209.245 200.172 12.812 5.425  1.192  H9  A2U 59 
A2U H10 H10 H 0 1 N N N N N N 206.714 208.823 199.661 11.438 6.315  0.493  H10 A2U 60 
A2U H11 H11 H 0 1 N N N N N N 207.596 206.988 202.095 9.894  4.021  0.605  H11 A2U 61 
A2U H12 H12 H 0 1 N N N N N N 206.234 206.335 201.124 11.267 3.130  1.304  H12 A2U 62 
A2U H13 H13 H 0 1 N N N N N N 207.521 204.193 200.774 9.761  2.369  -1.240 H13 A2U 63 
A2U H14 H14 H 0 1 N N N N N N 208.867 204.847 201.768 11.135 1.479  -0.541 H14 A2U 64 
A2U H15 H15 H 0 1 N N N N N N 206.527 202.854 200.722 7.006  0.115  1.302  H15 A2U 65 
A2U H16 H16 H 0 1 N N N N N N 205.387 201.733 201.540 8.379  -0.776 2.001  H16 A2U 66 
A2U H17 H17 H 0 1 N N N N N N 211.754 201.870 203.459 5.263  -4.407 2.759  H17 A2U 67 
A2U H18 H18 H 0 1 N N N N N N 213.881 202.752 201.999 1.583  -3.802 2.460  H18 A2U 68 
A2U H19 H19 H 0 1 N N N N N N 214.024 202.111 200.327 2.426  -5.347 2.194  H19 A2U 69 
A2U H20 H20 H 0 1 N N N N N N 212.832 203.404 200.695 2.865  -4.321 3.580  H20 A2U 70 
A2U H21 H21 H 0 1 N N N N N N 212.396 199.767 202.805 3.830  -3.023 -0.380 H21 A2U 71 
A2U H22 H22 H 0 1 N N N N N N 212.965 199.382 201.145 2.934  -4.543 -0.148 H22 A2U 72 
A2U H23 H23 H 0 1 N N N N N N 218.428 200.176 205.459 -4.645 -1.996 -1.335 H23 A2U 73 
A2U H24 H24 H 0 1 N N N N N N 219.227 201.668 204.856 -4.343 -0.307 -1.808 H24 A2U 74 
A2U H25 H25 H 0 1 N N N N N N 218.558 202.469 206.901 -4.912 -1.216 1.052  H25 A2U 75 
A2U H26 H26 H 0 1 N N N N N N 215.191 201.931 205.135 -5.296 1.779  -1.194 H26 A2U 76 
A2U H27 H27 H 0 1 N N N N N N 212.685 201.806 205.419 -4.843 2.546  2.480  H27 A2U 77 
A2U H28 H28 H 0 1 N N N N N N 214.766 207.028 208.706 -7.260 6.015  -2.472 H28 A2U 78 
A2U H29 H29 H 0 1 N N N N N N 214.837 200.788 206.979 -7.625 1.277  -0.838 H29 A2U 79 
A2U H30 H30 H 0 1 N N N N N N 217.051 200.161 206.803 -6.727 -0.864 -1.178 H30 A2U 80 
A2U H31 H31 H 0 1 N N N N N N 207.128 204.946 203.660 9.145  1.748  1.445  H31 A2U 81 
A2U H32 H32 H 0 1 N N N N N N 208.920 202.618 201.138 6.258  -2.158 2.142  H32 A2U 82 
A2U H33 H33 H 0 1 N N N N N N 210.318 206.821 208.269 -5.795 7.284  2.437  H33 A2U 83 
A2U H34 H34 H 0 1 N N N N N N 210.129 206.054 206.839 -6.403 8.388  1.327  H34 A2U 84 
A2U H35 H35 H 0 1 N N N N N N 210.450 203.712 202.820 4.374  -5.750 0.343  H35 A2U 85 
A2U H36 H36 H 0 1 N N N N N N 215.907 197.785 201.565 2.129  -0.736 -1.765 H36 A2U 86 
A2U H37 H37 H 0 1 N N N N N N 219.753 200.039 202.303 -1.313 0.306  -2.499 H37 A2U 87 
A2U H38 H38 H 0 1 N N N N N N 215.264 201.689 209.048 -7.738 2.175  1.407  H38 A2U 88 
A2U H39 H39 H 0 1 N N N N N N 219.783 199.805 210.212 -9.577 -3.914 1.374  H39 A2U 89 
A2U H40 H40 H 0 1 N N N N N N 220.517 202.124 207.695 -6.591 -4.048 0.359  H40 A2U 90 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A2U C01 C02 SING N N 1  
A2U C02 S03 SING N N 2  
A2U S03 C04 SING N N 3  
A2U O23 P21 DOUB N N 4  
A2U C17 C16 SING N N 5  
A2U C18 C16 SING N N 6  
A2U C04 C05 SING N N 7  
A2U O24 P21 SING N N 8  
A2U O24 P25 SING N N 9  
A2U C16 C19 SING N N 10 
A2U C16 C14 SING N N 11 
A2U P21 O22 SING N N 12 
A2U P21 O20 SING N N 13 
A2U C09 C10 SING N N 14 
A2U C09 C07 SING N N 15 
A2U C05 N06 SING N N 16 
A2U C10 N11 SING N N 17 
A2U N11 C12 SING N N 18 
A2U C19 O20 SING N N 19 
A2U O15 C14 SING N N 20 
A2U O26 P25 DOUB N N 21 
A2U C14 C12 SING N N 22 
A2U C12 O13 DOUB N N 23 
A2U O27 P25 SING N N 24 
A2U P25 O28 SING N N 25 
A2U N06 C07 SING N N 26 
A2U C07 O08 DOUB N N 27 
A2U O28 C29 SING N N 28 
A2U C29 C30 SING N N 29 
A2U O31 C32 SING N N 30 
A2U O31 C30 SING N N 31 
A2U C34 N33 SING Y N 32 
A2U C34 N35 DOUB Y N 33 
A2U C32 N33 SING N N 34 
A2U C32 C43 SING N N 35 
A2U N33 C42 SING Y N 36 
A2U C30 C45 SING N N 37 
A2U N35 C36 SING Y N 38 
A2U C42 C36 DOUB Y N 39 
A2U C42 N41 SING Y N 40 
A2U C36 C37 SING Y N 41 
A2U C43 C45 SING N N 42 
A2U C43 O44 SING N N 43 
A2U C45 O46 SING N N 44 
A2U N41 C40 DOUB Y N 45 
A2U C37 N38 SING N N 46 
A2U C37 N39 DOUB Y N 47 
A2U O49 P47 DOUB N N 48 
A2U C40 N39 SING Y N 49 
A2U O50 P47 SING N N 50 
A2U O46 P47 SING N N 51 
A2U P47 O48 SING N N 52 
A2U C10 H1  SING N N 53 
A2U C10 H2  SING N N 54 
A2U C17 H3  SING N N 55 
A2U C17 H4  SING N N 56 
A2U C17 H5  SING N N 57 
A2U C01 H6  SING N N 58 
A2U C01 H7  SING N N 59 
A2U C01 H8  SING N N 60 
A2U C02 H9  SING N N 61 
A2U C02 H10 SING N N 62 
A2U C04 H11 SING N N 63 
A2U C04 H12 SING N N 64 
A2U C05 H13 SING N N 65 
A2U C05 H14 SING N N 66 
A2U C09 H15 SING N N 67 
A2U C09 H16 SING N N 68 
A2U C14 H17 SING N N 69 
A2U C18 H18 SING N N 70 
A2U C18 H19 SING N N 71 
A2U C18 H20 SING N N 72 
A2U C19 H21 SING N N 73 
A2U C19 H22 SING N N 74 
A2U C29 H23 SING N N 75 
A2U C29 H24 SING N N 76 
A2U C30 H25 SING N N 77 
A2U C32 H26 SING N N 78 
A2U C34 H27 SING N N 79 
A2U C40 H28 SING N N 80 
A2U C43 H29 SING N N 81 
A2U C45 H30 SING N N 82 
A2U N06 H31 SING N N 83 
A2U N11 H32 SING N N 84 
A2U N38 H33 SING N N 85 
A2U N38 H34 SING N N 86 
A2U O15 H35 SING N N 87 
A2U O22 H36 SING N N 88 
A2U O27 H37 SING N N 89 
A2U O44 H38 SING N N 90 
A2U O48 H39 SING N N 91 
A2U O50 H40 SING N N 92 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A2U InChI            InChI                1.06  "InChI=1S/C23H40N7O16P3S/c1-4-50-8-7-25-14(31)5-6-26-21(34)18(33)23(2,3)10-43-49(40,41)46-48(38,39)42-9-13-17(45-47(35,36)37)16(32)22(44-13)30-12-29-15-19(24)27-11-28-20(15)30/h11-13,16-18,22,32-33H,4-10H2,1-3H3,(H,25,31)(H,26,34)(H,38,39)(H,40,41)(H2,24,27,28)(H2,35,36,37)/t13-,16-,17-,18+,22+/m1/s1" 
A2U InChIKey         InChI                1.06  YGTAAWZKDDQUQN-RJFKWGFDSA-N                                                                                                                                                                                                                                                                                    
A2U SMILES_CANONICAL CACTVS               3.385 "CCSCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23"                                                                                                                                                                                        
A2U SMILES           CACTVS               3.385 "CCSCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23"                                                                                                                                                                                               
A2U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCSCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O"                                                                                                                                                                                              
A2U SMILES           "OpenEye OEToolkits" 2.0.7 "CCSCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O"                                                                                                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           A2U 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[[(2~{R},3~{S},4~{R},5~{S})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[3-(2-ethylsulfanylethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A2U "Create component" 2023-07-17 PDBE 
A2U "Initial release"  2024-04-17 RCSB 
# 
