data_5KU
#

_chem_comp.id                                   5KU
_chem_comp.name                                 "(6R)-5-(acetylamino)-2,6-anhydro-3,4,5-trideoxy-4-[(diaminomethylidene)amino]-6-[(11R,12S)-12,13-dihydroxy-9-oxo-2,5,10-trioxa-8-azatridecan-11-yl]-D-threo-hex-2-enonic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H31 N5 O10"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-10-15
_chem_comp.pdbx_modified_date                   2020-04-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       477.466
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5KU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5E6L
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5KU  CAI  C1   C  0  1  N  N  N  -33.087  -69.075  -18.572  -6.421   3.696   0.335  CAI  5KU   1  
5KU  CAK  C2   C  0  1  N  N  N  -32.680  -66.928  -19.609  -6.125   1.577   1.416  CAK  5KU   2  
5KU  CAL  C3   C  0  1  N  N  N  -33.150  -66.270  -18.295  -6.130   0.070   1.154  CAL  5KU   3  
5KU  CAN  C4   C  0  1  N  N  N  -32.289  -65.591  -16.148  -4.968  -1.656  -0.038  CAN  5KU   4  
5KU  CAO  C5   C  0  1  N  N  N  -30.881  -65.563  -15.435  -3.788  -1.896  -0.981  CAO  5KU   5  
5KU  CAT  C6   C  0  1  N  N  R  -26.313  -62.401  -17.945   2.065  -0.586  -0.549  CAT  5KU   6  
5KU  CAU  C7   C  0  1  N  N  S  -25.614  -61.948  -16.699   1.495   0.837  -0.631  CAU  5KU   7  
5KU  CAV  C8   C  0  1  N  N  R  -24.725  -62.963  -16.167   2.587   1.818  -0.191  CAV  5KU   8  
5KU  CAW  C9   C  0  1  N  N  N  -23.655  -63.379  -17.112   3.220   1.325   1.081  CAW  5KU   9  
5KU  CAX  C10  C  0  1  N  N  N  -24.282  -63.576  -18.523   3.097   0.073   1.495  CAX  5KU  10  
5KU  CAZ  C11  C  0  1  N  N  R  -27.869  -62.507  -17.823   1.022  -1.589  -1.045  CAZ  5KU  11  
5KU  OAJ  O1   O  0  1  N  N  N  -33.236  -68.249  -19.708  -6.402   2.273   0.199  OAJ  5KU  12  
5KU  OAM  O2   O  0  1  N  N  N  -32.127  -66.446  -17.303  -5.054  -0.264   0.273  OAM  5KU  13  
5KU  OAY  O3   O  0  1  N  N  N  -25.793  -63.681  -18.403   2.389  -0.863   0.816  OAY  5KU  14  
5KU  CBA  C12  C  0  1  N  N  S  -28.547  -61.898  -19.071   1.547  -3.012  -0.846  CBA  5KU  15  
5KU  CBB  C13  C  0  1  N  N  N  -29.755  -62.741  -19.574   0.457  -4.016  -1.226  CBB  5KU  16  
5KU  CBF  C14  C  0  1  N  N  N  -23.964  -61.554  -13.923   3.942   3.079  -1.717  CBF  5KU  17  
5KU  CBJ  C15  C  0  1  N  N  N  -29.257  -63.998  -16.663  -1.359  -1.712  -0.930  CBJ  5KU  18  
5KU  CBO  C16  C  0  1  N  N  N  -27.181  -61.621  -14.388  -0.611   1.882   0.011  CBO  5KU  19  
5KU  CBP  C17  C  0  1  N  N  N  -27.964  -60.489  -13.661  -1.802   2.005   0.926  CBP  5KU  20  
5KU  CBQ  C18  C  0  1  N  N  N  -23.719  -64.525  -19.437   3.760  -0.322   2.750  CBQ  5KU  21  
5KU  NBD  N1   N  0  1  N  N  N  -24.180  -62.708  -14.747   3.607   1.914  -1.239  NBD  5KU  22  
5KU  NBG  N2   N  0  1  N  N  N  -24.143  -60.335  -14.271   4.779   3.161  -2.805  NBG  5KU  23  
5KU  NBH  N3   N  0  1  N  N  N  -23.550  -61.829  -12.760   3.458   4.226  -1.134  NBH  5KU  24  
5KU  NBI  N4   N  0  1  N  N  N  -29.819  -65.355  -16.460  -2.537  -1.575  -0.290  NBI  5KU  25  
5KU  NBM  N5   N  0  1  N  N  N  -26.522  -61.201  -15.671   0.337   0.956   0.259  NBM  5KU  26  
5KU  OBC  O4   O  0  1  N  N  N  -30.793  -61.855  -19.100   0.984  -5.342  -1.151  OBC  5KU  27  
5KU  OBE  O5   O  0  1  N  N  N  -27.745  -61.571  -20.153   1.911  -3.198   0.523  OBE  5KU  28  
5KU  OBK  O6   O  0  1  N  N  N  -28.252  -63.833  -17.645  -0.209  -1.418  -0.294  OBK  5KU  29  
5KU  OBL  O7   O  0  1  N  N  N  -29.668  -63.068  -16.039  -1.335  -2.101  -2.081  OBL  5KU  30  
5KU  OBN  O8   O  0  1  N  N  N  -27.138  -62.733  -13.934  -0.506   2.616  -0.949  OBN  5KU  31  
5KU  OBR  O9   O  0  1  N  N  N  -24.423  -64.886  -20.407   4.401   0.495   3.381  OBR  5KU  32  
5KU  OBS  O10  O  0  1  N  N  N  -22.541  -64.924  -19.351   3.654  -1.588   3.199  OBS  5KU  33  
5KU  H1   H1   H  0  1  N  N  N  -33.549  -70.054  -18.767  -6.639   4.150  -0.632  H1   5KU  34  
5KU  H2   H2   H  0  1  N  N  N  -32.017  -69.211  -18.356  -7.191   3.982   1.052  H2   5KU  35  
5KU  H3   H3   H  0  1  N  N  N  -33.578  -68.603  -17.708  -5.449   4.040   0.688  H3   5KU  36  
5KU  H4   H4   H  0  1  N  N  N  -31.582  -66.991  -19.615  -6.888   1.819   2.156  H4   5KU  37  
5KU  H5   H5   H  0  1  N  N  N  -33.018  -66.323  -20.463  -5.147   1.877   1.792  H5   5KU  38  
5KU  H6   H6   H  0  1  N  N  N  -33.325  -65.197  -18.460  -6.006  -0.464   2.096  H6   5KU  39  
5KU  H7   H7   H  0  1  N  N  N  -34.082  -66.746  -17.955  -7.076  -0.216   0.695  H7   5KU  40  
5KU  H8   H8   H  0  1  N  N  N  -32.581  -64.577  -16.459  -5.891  -1.978  -0.521  H8   5KU  41  
5KU  H9   H9   H  0  1  N  N  N  -33.053  -66.001  -15.471  -4.821  -2.225   0.880  H9   5KU  42  
5KU  H10  H10  H  0  1  N  N  N  -30.711  -66.519  -14.917  -3.776  -2.941  -1.289  H10  5KU  43  
5KU  H11  H11  H  0  1  N  N  N  -30.854  -64.741  -14.705  -3.891  -1.259  -1.860  H11  5KU  44  
5KU  H12  H12  H  0  1  N  N  N  -26.109  -61.654  -18.726   2.963  -0.657  -1.163  H12  5KU  45  
5KU  H13  H13  H  0  1  N  N  N  -24.937  -61.157  -17.054   1.195   1.055  -1.656  H13  5KU  46  
5KU  H14  H14  H  0  1  N  N  N  -25.355  -63.858  -16.053   2.147   2.800  -0.022  H14  5KU  47  
5KU  H15  H15  H  0  1  N  N  N  -22.614  -63.521  -16.861   3.796   2.017   1.679  H15  5KU  48  
5KU  H18  H18  H  0  1  N  N  N  -28.174  -61.911  -16.951   0.828  -1.418  -2.104  H18  5KU  49  
5KU  H19  H19  H  0  1  N  N  N  -28.993  -60.957  -18.717   2.421  -3.168  -1.479  H19  5KU  50  
5KU  H20  H20  H  0  1  N  N  N  -29.801  -63.734  -19.103  -0.382  -3.919  -0.536  H20  5KU  51  
5KU  H21  H21  H  0  1  N  N  N  -29.764  -62.853  -20.668   0.116  -3.816  -2.242  H21  5KU  52  
5KU  H22  H22  H  0  1  N  N  N  -28.418  -60.888  -12.742  -2.455   2.801   0.568  H22  5KU  53  
5KU  H23  H23  H  0  1  N  N  N  -27.273  -59.673  -13.403  -2.350   1.063   0.937  H23  5KU  54  
5KU  H24  H24  H  0  1  N  N  N  -28.754  -60.106  -14.324  -1.462   2.240   1.935  H24  5KU  55  
5KU  H26  H26  H  0  1  N  N  N  -23.955  -59.597  -13.623   5.028   4.028  -3.161  H26  5KU  56  
5KU  H27  H27  H  0  1  N  N  N  -23.362  -61.093  -12.109   3.018   4.183  -0.271  H27  5KU  57  
5KU  H28  H28  H  0  1  N  N  N  -23.411  -62.782  -12.491   3.557   5.079  -1.586  H28  5KU  58  
5KU  H29  H29  H  0  1  N  N  N  -29.488  -66.124  -17.006  -2.557  -1.265   0.629  H29  5KU  59  
5KU  H30  H30  H  0  1  N  N  N  -26.701  -60.249  -15.917   0.252   0.369   1.027  H30  5KU  60  
5KU  H31  H31  H  0  1  N  N  N  -31.643  -62.215  -19.323   0.346  -6.032  -1.380  H31  5KU  61  
5KU  H32  H32  H  0  1  N  N  N  -27.005  -61.056  -19.855   1.180  -3.074   1.144  H32  5KU  62  
5KU  H33  H33  H  0  1  N  N  N  -22.341  -65.484  -20.092   4.106  -1.800   4.027  H33  5KU  63  
5KU  H16  H16  H  0  1  N  N  N  -24.470  -60.121  -15.191   5.120   2.351  -3.216  H16  5KU  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5KU  OBR  CBQ  DOUB  N  N   1  
5KU  OBE  CBA  SING  N  N   2  
5KU  OAJ  CAK  SING  N  N   3  
5KU  OAJ  CAI  SING  N  N   4  
5KU  CAK  CAL  SING  N  N   5  
5KU  CBB  OBC  SING  N  N   6  
5KU  CBB  CBA  SING  N  N   7  
5KU  CBQ  OBS  SING  N  N   8  
5KU  CBQ  CAX  SING  N  N   9  
5KU  CBA  CAZ  SING  N  N  10  
5KU  CAX  OAY  SING  N  N  11  
5KU  CAX  CAW  DOUB  N  N  12  
5KU  OAY  CAT  SING  N  N  13  
5KU  CAL  OAM  SING  N  N  14  
5KU  CAT  CAZ  SING  N  N  15  
5KU  CAT  CAU  SING  N  N  16  
5KU  CAZ  OBK  SING  N  N  17  
5KU  OBK  CBJ  SING  N  N  18  
5KU  OAM  CAN  SING  N  N  19  
5KU  CAW  CAV  SING  N  N  20  
5KU  CAU  CAV  SING  N  N  21  
5KU  CAU  NBM  SING  N  N  22  
5KU  CBJ  NBI  SING  N  N  23  
5KU  CBJ  OBL  DOUB  N  N  24  
5KU  NBI  CAO  SING  N  N  25  
5KU  CAV  NBD  SING  N  N  26  
5KU  CAN  CAO  SING  N  N  27  
5KU  NBM  CBO  SING  N  N  28  
5KU  NBD  CBF  DOUB  N  N  29  
5KU  CBO  OBN  DOUB  N  N  30  
5KU  CBO  CBP  SING  N  N  31  
5KU  NBG  CBF  SING  N  N  32  
5KU  CBF  NBH  SING  N  N  33  
5KU  CAI  H1   SING  N  N  34  
5KU  CAI  H2   SING  N  N  35  
5KU  CAI  H3   SING  N  N  36  
5KU  CAK  H4   SING  N  N  37  
5KU  CAK  H5   SING  N  N  38  
5KU  CAL  H6   SING  N  N  39  
5KU  CAL  H7   SING  N  N  40  
5KU  CAN  H8   SING  N  N  41  
5KU  CAN  H9   SING  N  N  42  
5KU  CAO  H10  SING  N  N  43  
5KU  CAO  H11  SING  N  N  44  
5KU  CAT  H12  SING  N  N  45  
5KU  CAU  H13  SING  N  N  46  
5KU  CAV  H14  SING  N  N  47  
5KU  CAW  H15  SING  N  N  48  
5KU  CAZ  H18  SING  N  N  49  
5KU  CBA  H19  SING  N  N  50  
5KU  CBB  H20  SING  N  N  51  
5KU  CBB  H21  SING  N  N  52  
5KU  CBP  H22  SING  N  N  53  
5KU  CBP  H23  SING  N  N  54  
5KU  CBP  H24  SING  N  N  55  
5KU  NBG  H26  SING  N  N  56  
5KU  NBH  H27  SING  N  N  57  
5KU  NBH  H28  SING  N  N  58  
5KU  NBI  H29  SING  N  N  59  
5KU  NBM  H30  SING  N  N  60  
5KU  OBC  H31  SING  N  N  61  
5KU  OBE  H32  SING  N  N  62  
5KU  OBS  H33  SING  N  N  63  
5KU  NBG  H16  SING  N  N  64  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5KU  SMILES            ACDLabs               12.01  "COCCOCCNC(=O)OC(C1C(C(\N=C(\N)N)C=C(O1)C(O)=O)NC(=O)C)C(CO)O"  
5KU  InChI             InChI                 1.03   "InChI=1S/C18H31N5O10/c1-9(25)22-13-10(23-17(19)20)7-12(16(27)28)32-15(13)14(11(26)8-24)33-18(29)21-3-4-31-6-5-30-2/h7,10-11,13-15,24,26H,3-6,8H2,1-2H3,(H,21,29)(H,22,25)(H,27,28)(H4,19,20,23)/t10-,11+,13+,14-,15-/m1/s1"  
5KU  InChIKey          InChI                 1.03   BQFYPGHOUKTECI-ZVJHWVFESA-N  
5KU  SMILES_CANONICAL  CACTVS                3.385  "COCCOCCNC(=O)O[C@H]([C@@H](O)CO)[C@@H]1OC(=C[C@@H](N=C(N)N)[C@@H]1NC(C)=O)C(O)=O"  
5KU  SMILES            CACTVS                3.385  "COCCOCCNC(=O)O[CH]([CH](O)CO)[CH]1OC(=C[CH](N=C(N)N)[CH]1NC(C)=O)C(O)=O"  
5KU  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "CC(=O)N[C@H]1[C@@H](C=C(O[C@H]1[C@@H]([C@H](CO)O)OC(=O)NCCOCCOC)C(=O)O)N=C(N)N"  
5KU  SMILES            "OpenEye OEToolkits"  1.9.2  "CC(=O)NC1C(C=C(OC1C(C(CO)O)OC(=O)NCCOCCOC)C(=O)O)N=C(N)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5KU  "SYSTEMATIC NAME"  ACDLabs               12.01  "(6R)-5-(acetylamino)-2,6-anhydro-3,4,5-trideoxy-4-[(diaminomethylidene)amino]-6-[(11R,12S)-12,13-dihydroxy-9-oxo-2,5,10-trioxa-8-azatridecan-11-yl]-D-threo-hex-2-enonic acid"  
5KU  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(2R,3S,4R)-3-acetamido-4-[bis(azanyl)methylideneamino]-2-[(1R,2S)-1-[2-(2-methoxyethoxy)ethylcarbamoyloxy]-2,3-bis(oxidanyl)propyl]-3,4-dihydro-2H-pyran-6-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5KU  "Create component"    2015-10-15  RCSB  
5KU  "Initial release"     2016-03-02  RCSB  
5KU  "Obsolete component"  2020-04-12  RCSB  
##
