data_0U
# 
_chem_comp.id                                    0U 
_chem_comp.name                                  "L-URIDINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "L-RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C9 H13 N2 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-07-16 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        324.181 
_chem_comp.one_letter_code                       U 
_chem_comp.three_letter_code                     0U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1R3O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0U OP3    O3P    O 0 1 N Y N -5.079 6.025  103.390 5.309  0.123  -0.181 OP3    0U 1  
0U P      P      P 0 1 N N N -4.674 6.848  102.070 4.116  -0.945 -0.004 P      0U 2  
0U OP1    O1P    O 0 1 N N N -4.085 5.880  101.100 3.899  -1.658 -1.283 OP1    0U 3  
0U OP2    O2P    O 0 1 N N N -5.858 7.684  101.727 4.510  -2.005 1.141  OP2    0U 4  
0U "O5'"  "O5'"  O 0 1 N N N -3.511 7.756  102.545 2.766  -0.176 0.418  "O5'"  0U 5  
0U "C5'"  "C5'"  C 0 1 N N N -2.268 7.168  102.852 2.101  0.755  -0.438 "C5'"  0U 6  
0U "C4'"  "C4'"  C 0 1 N N S -1.367 8.232  103.410 0.857  1.299  0.268  "C4'"  0U 7  
0U "O4'"  "O4'"  O 0 1 N N N -1.897 8.778  104.650 -0.116 0.248  0.453  "O4'"  0U 8  
0U "C3'"  "C3'"  C 0 1 N N R -1.171 9.452  102.500 0.146  2.343  -0.622 "C3'"  0U 9  
0U "O3'"  "O3'"  O 0 1 N N N -0.152 9.207  101.515 0.507  3.667  -0.225 "O3'"  0U 10 
0U "C2'"  "C2'"  C 0 1 N N S -0.673 10.463 103.515 -1.357 2.091  -0.367 "C2'"  0U 11 
0U "O2'"  "O2'"  O 0 1 N N N 0.687  10.242 103.786 -1.971 3.253  0.194  "O2'"  0U 12 
0U "C1'"  "C1'"  C 0 1 N N S -1.554 10.162 104.739 -1.377 0.925  0.646  "C1'"  0U 13 
0U N1     N1     N 0 1 N N N -2.789 11.035 104.772 -2.492 0.020  0.360  N1     0U 14 
0U C2     C2     C 0 1 N N N -2.726 12.317 105.288 -2.242 -1.254 0.006  C2     0U 15 
0U O2     O2     O 0 1 N N N -1.708 12.786 105.768 -1.092 -1.640 -0.071 O2     0U 16 
0U N3     N3     N 0 1 N N N -3.916 13.016 105.254 -3.247 -2.108 -0.262 N3     0U 17 
0U C4     C4     C 0 1 N N N -5.124 12.583 104.737 -4.529 -1.696 -0.181 C4     0U 18 
0U O4     O4     O 0 1 N N N -6.125 13.306 104.753 -5.439 -2.467 -0.423 O4     0U 19 
0U C5     C5     C 0 1 N N N -5.111 11.252 104.196 -4.806 -0.358 0.190  C5     0U 20 
0U C6     C6     C 0 1 N N N -3.971 10.556 104.236 -3.778 0.476  0.460  C6     0U 21 
0U HOP3   HOP3   H 0 0 N N N -4.859 5.108  103.272 5.506  0.628  0.620  HOP3   0U 22 
0U HOP2   HOP2   H 0 0 N N N -6.137 7.490  100.840 5.316  -2.506 0.953  HOP2   0U 23 
0U "H5'"  "H5'1" H 0 1 N N N -2.406 6.368  103.595 2.775  1.579  -0.673 "H5'"  0U 24 
0U "H5''" "H5'2" H 0 0 N N N -1.822 6.740  101.942 1.805  0.254  -1.360 "H5''" 0U 25 
0U "H4'"  "H4'"  H 0 1 N N N -0.411 7.704  103.538 1.128  1.738  1.228  "H4'"  0U 26 
0U "H3'"  "H3'"  H 0 1 N N N -2.066 9.746  101.932 0.391  2.180  -1.671 "H3'"  0U 27 
0U "HO3'" H3T    H 0 0 N Y N -0.050 9.976  100.966 0.089  4.363  -0.750 "HO3'" 0U 28 
0U "H2'"  "H2'"  H 0 1 N N N -0.742 11.511 103.187 -1.858 1.805  -1.292 "H2'"  0U 29 
0U "HO2'" "HO'2" H 0 0 N N N 0.991  10.879 104.422 -1.933 4.033  -0.376 "HO2'" 0U 30 
0U "H1'"  "H1'"  H 0 1 N N N -1.014 10.381 105.672 -1.449 1.308  1.664  "H1'"  0U 31 
0U H3     H3     H 0 1 N N N -3.903 13.936 105.646 -3.050 -3.023 -0.516 H3     0U 32 
0U H5     H5     H 0 1 N N N -6.004 10.823 103.766 -5.826 -0.009 0.261  H5     0U 33 
0U H6     H6     H 0 1 N N N -3.972 9.558  103.824 -3.970 1.498  0.748  H6     0U 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0U OP3   P      SING N N 1  
0U OP3   HOP3   SING N N 2  
0U P     OP1    DOUB N N 3  
0U P     OP2    SING N N 4  
0U P     "O5'"  SING N N 5  
0U OP2   HOP2   SING N N 6  
0U "O5'" "C5'"  SING N N 7  
0U "C5'" "C4'"  SING N N 8  
0U "C5'" "H5'"  SING N N 9  
0U "C5'" "H5''" SING N N 10 
0U "C4'" "O4'"  SING N N 11 
0U "C4'" "C3'"  SING N N 12 
0U "C4'" "H4'"  SING N N 13 
0U "O4'" "C1'"  SING N N 14 
0U "C3'" "O3'"  SING N N 15 
0U "C3'" "C2'"  SING N N 16 
0U "C3'" "H3'"  SING N N 17 
0U "O3'" "HO3'" SING N N 18 
0U "C2'" "O2'"  SING N N 19 
0U "C2'" "C1'"  SING N N 20 
0U "C2'" "H2'"  SING N N 21 
0U "O2'" "HO2'" SING N N 22 
0U "C1'" N1     SING N N 23 
0U "C1'" "H1'"  SING N N 24 
0U N1    C2     SING N N 25 
0U N1    C6     SING N N 26 
0U C2    O2     DOUB N N 27 
0U C2    N3     SING N N 28 
0U N3    C4     SING N N 29 
0U N3    H3     SING N N 30 
0U C4    O4     DOUB N N 31 
0U C4    C5     SING N N 32 
0U C5    C6     DOUB N N 33 
0U C5    H5     SING N N 34 
0U C6    H6     SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0U SMILES           ACDLabs              11.02 "O=P(O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O"                                                                                                         
0U SMILES_CANONICAL CACTVS               3.352 "O[C@@H]1[C@H](O)[C@H](O[C@H]1CO[P](O)(O)=O)N2C=CC(=O)NC2=O"                                                                                        
0U SMILES           CACTVS               3.352 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=O)NC2=O"                                                                                             
0U SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)NC1=O)[C@@H]2[C@H]([C@H]([C@@H](O2)COP(=O)(O)O)O)O"                                                                                     
0U SMILES           "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)O)O)O"                                                                                                       
0U InChI            InChI                1.03  "InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m0/s1" 
0U InChIKey         InChI                1.03  DJJCXFVJDGTHFX-PSQAKQOGSA-N                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0U "SYSTEMATIC NAME" ACDLabs              11.02 "1-(5-O-phosphono-beta-L-ribofuranosyl)pyrimidine-2,4(1H,3H)-dione"                                
0U "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[(2S,3R,4S,5S)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0U "Create component"  2009-07-16 RCSB 
0U "Modify descriptor" 2011-06-04 RCSB 
# 
