data_XTT
# 
_chem_comp.id                                    XTT 
_chem_comp.name                                  "6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H13 N7 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Aplithianine B" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-07 
_chem_comp.pdbx_modified_date                    2023-10-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        315.354 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XTT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FE5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XTT C10 C1  C 0 1 Y N N 8.914  18.340 -2.414 4.764  1.943  0.619  C10 XTT 1  
XTT C13 C2  C 0 1 N N N -0.764 21.462 0.425  -3.812 1.547  -1.149 C13 XTT 2  
XTT C01 C3  C 0 1 N N N 2.428  18.254 -0.426 -0.173 -2.016 -1.114 C01 XTT 3  
XTT C02 C4  C 0 1 N N N 3.185  16.832 -0.398 1.082  -2.807 -0.715 C02 XTT 4  
XTT C03 C5  C 0 1 Y N N 3.656  23.008 0.000  -3.073 -1.364 2.142  C03 XTT 5  
XTT C04 C6  C 0 1 Y N N 1.311  22.581 0.253  -3.790 0.180  0.596  C04 XTT 6  
XTT C05 C7  C 0 1 Y N N 1.576  21.211 0.139  -2.561 0.078  -0.057 C05 XTT 7  
XTT C06 C8  C 0 1 Y N N 2.956  20.781 -0.050 -1.602 -0.793 0.460  C06 XTT 8  
XTT C07 C9  C 0 1 N N N 5.292  18.327 -1.497 1.934  -0.229 -0.075 C07 XTT 9  
XTT C08 C10 C 0 1 N N N 4.684  19.255 -0.573 0.639  -0.034 0.168  C08 XTT 10 
XTT C09 C11 C 0 1 Y N N 6.740  18.021 -1.919 2.906  0.802  0.329  C09 XTT 11 
XTT C11 C12 C 0 1 Y N N 7.307  16.793 -2.216 2.646  1.930  1.049  C11 XTT 12 
XTT C12 C13 C 0 1 N N N 7.548  20.420 -1.805 5.006  -0.205 -0.682 C12 XTT 13 
XTT N01 N1  N 0 1 N N N 3.357  19.386 -0.186 -0.366 -0.930 -0.153 N01 XTT 14 
XTT N02 N2  N 0 1 Y N N 3.944  21.657 -0.101 -1.899 -1.491 1.556  N02 XTT 15 
XTT N03 N3  N 0 1 Y N N 2.393  23.540 0.186  -4.007 -0.557 1.681  N03 XTT 16 
XTT N04 N4  N 0 1 N N N -0.168 22.649 0.428  -4.545 1.098  -0.112 N04 XTT 17 
XTT N05 N5  N 0 1 N N N 0.235  20.588 0.257  -2.605 0.948  -1.142 N05 XTT 18 
XTT N06 N6  N 0 1 Y N N 7.722  18.988 -2.028 4.258  0.811  0.062  N06 XTT 19 
XTT N07 N7  N 0 1 Y N N 8.653  17.005 -2.527 3.796  2.597  1.201  N07 XTT 20 
XTT O01 O1  O 0 1 N N N -2.126 21.189 0.574  -4.185 2.365  -1.969 O01 XTT 21 
XTT S01 S1  S 0 1 N N N 4.506  16.732 -1.717 2.512  -1.694 -0.868 S01 XTT 22 
XTT H1  H1  H 0 1 N N N 9.867  18.817 -2.590 5.799  2.248  0.588  H1  XTT 23 
XTT H2  H2  H 0 1 N N N 1.956  18.385 -1.411 -0.042 -1.601 -2.113 H2  XTT 24 
XTT H3  H3  H 0 1 N N N 1.654  18.259 0.355  -1.041 -2.675 -1.100 H3  XTT 25 
XTT H4  H4  H 0 1 N N N 2.449  16.032 -0.568 0.991  -3.150 0.316  H4  XTT 26 
XTT H5  H5  H 0 1 N N N 3.653  16.696 0.588  1.207  -3.662 -1.379 H5  XTT 27 
XTT H6  H6  H 0 1 N N N 4.482  23.700 -0.072 -3.281 -1.950 3.026  H6  XTT 28 
XTT H8  H8  H 0 1 N N N 5.366  19.954 -0.112 0.353  0.889  0.650  H8  XTT 29 
XTT H10 H10 H 0 1 N N N 6.799  15.840 -2.209 1.682  2.233  1.429  H10 XTT 30 
XTT H11 H11 H 0 1 N N N 6.507  20.622 -1.513 5.273  -1.022 -0.013 H11 XTT 31 
XTT H12 H12 H 0 1 N N N 8.224  20.751 -1.003 4.389  -0.588 -1.495 H12 XTT 32 
XTT H13 H13 H 0 1 N N N 7.782  20.966 -2.731 5.913  0.240  -1.092 H13 XTT 33 
XTT H14 H14 H 0 1 N N N -0.666 23.509 0.538  -5.451 1.371  0.102  H14 XTT 34 
XTT H15 H15 H 0 1 N N N 0.090  19.599 0.215  -1.893 1.094  -1.784 H15 XTT 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XTT N07 C10 DOUB Y N 1  
XTT N07 C11 SING Y N 2  
XTT C10 N06 SING Y N 3  
XTT C11 C09 DOUB Y N 4  
XTT N06 C09 SING Y N 5  
XTT N06 C12 SING N N 6  
XTT C09 C07 SING N N 7  
XTT S01 C07 SING N N 8  
XTT S01 C02 SING N N 9  
XTT C07 C08 DOUB N N 10 
XTT C08 N01 SING N N 11 
XTT C01 C02 SING N N 12 
XTT C01 N01 SING N N 13 
XTT N01 C06 SING N N 14 
XTT N02 C06 DOUB Y N 15 
XTT N02 C03 SING Y N 16 
XTT C06 C05 SING Y N 17 
XTT C03 N03 DOUB Y N 18 
XTT C05 C04 DOUB Y N 19 
XTT C05 N05 SING N N 20 
XTT N03 C04 SING Y N 21 
XTT C04 N04 SING N N 22 
XTT N05 C13 SING N N 23 
XTT C13 N04 SING N N 24 
XTT C13 O01 DOUB N N 25 
XTT C10 H1  SING N N 26 
XTT C01 H2  SING N N 27 
XTT C01 H3  SING N N 28 
XTT C02 H4  SING N N 29 
XTT C02 H5  SING N N 30 
XTT C03 H6  SING N N 31 
XTT C08 H8  SING N N 32 
XTT C11 H10 SING N N 33 
XTT C12 H11 SING N N 34 
XTT C12 H12 SING N N 35 
XTT C12 H13 SING N N 36 
XTT N04 H14 SING N N 37 
XTT N05 H15 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XTT SMILES           ACDLabs              12.01 "Cn1cncc1C1=CN(CCS1)c1ncnc2NC(=O)Nc12"                                                                                         
XTT InChI            InChI                1.06  "InChI=1S/C13H13N7OS/c1-19-7-14-4-8(19)9-5-20(2-3-22-9)12-10-11(15-6-16-12)18-13(21)17-10/h4-7H,2-3H2,1H3,(H2,15,16,17,18,21)" 
XTT InChIKey         InChI                1.06  SKLGDFMOCQVDTN-UHFFFAOYSA-N                                                                                                    
XTT SMILES_CANONICAL CACTVS               3.385 "Cn1cncc1C2=CN(CCS2)c3ncnc4NC(=O)Nc34"                                                                                         
XTT SMILES           CACTVS               3.385 "Cn1cncc1C2=CN(CCS2)c3ncnc4NC(=O)Nc34"                                                                                         
XTT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cncc1C2=CN(CCS2)c3c4c(ncn3)NC(=O)N4"                                                                                       
XTT SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1cncc1C2=CN(CCS2)c3c4c(ncn3)NC(=O)N4"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XTT "SYSTEMATIC NAME" ACDLabs              12.01 "6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one" 
XTT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[6-(3-methylimidazol-4-yl)-2,3-dihydro-1,4-thiazin-4-yl]-7,9-dihydropurin-8-one"                 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XTT "Create component" 2022-12-07 RCSB 
XTT "Initial release"  2023-10-18 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      XTT 
_pdbx_chem_comp_synonyms.name         "Aplithianine B" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
