data_XET
# 
_chem_comp.id                                    XET 
_chem_comp.name                                  "[6-(methanesulfonyl)-1,6-diazaspiro[3.3]heptan-1-yl][2-({[3-(propan-2-yl)-5-(trifluoromethoxy)phenyl]methyl}amino)pyrimidin-5-yl]methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H26 F3 N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-06 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        513.533 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XET 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G3I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XET C11 C1  C 0 1 N N N N N N -11.612 8.455  41.823 6.453   2.910  -0.058 C11 XET 1  
XET C15 C2  C 0 1 N N N N N N -14.140 4.884  45.322 2.913   -0.559 -0.665 C15 XET 2  
XET C17 C3  C 0 1 Y N N N N N -14.861 7.033  46.282 0.868   -0.567 0.709  C17 XET 3  
XET C19 C4  C 0 1 Y N N N N N -15.608 8.937  47.267 -1.032  -0.571 2.009  C19 XET 4  
XET C20 C5  C 0 1 Y N N N N N -14.311 9.295  47.631 -1.810  -0.500 0.846  C20 XET 5  
XET C21 C6  C 0 1 Y N N N N N -13.326 8.380  47.271 -1.152  -0.465 -0.391 C21 XET 6  
XET C23 C7  C 0 1 N N N N N N -14.136 10.544 48.430 -3.283  -0.462 0.921  C23 XET 7  
XET C26 C8  C 0 1 N N N N N N -11.490 10.503 48.620 -3.710  -0.737 -1.638 C26 XET 8  
XET C27 C9  C 0 1 N N N N N N -11.057 11.768 49.384 -5.163  -1.232 -1.777 C27 XET 9  
XET C28 C10 C 0 1 N N N N N N -12.492 12.174 49.488 -5.445  -0.418 -0.515 C28 XET 10 
XET C1  C11 C 0 1 N N N N N N -10.088 2.167  43.343 8.181   -3.249 -1.320 C1  XET 11 
XET C2  C12 C 0 1 N N N N N N -10.590 3.044  42.205 7.145   -3.187 -0.196 C2  XET 12 
XET C3  C13 C 0 1 N N N N N N -11.155 2.205  41.072 7.848   -3.342 1.154  C3  XET 13 
XET C4  C14 C 0 1 Y N N N N N -11.557 4.148  42.626 6.432   -1.860 -0.241 C4  XET 14 
XET C5  C15 C 0 1 Y N N N N N -12.393 4.035  43.735 5.063   -1.817 -0.423 C5  XET 15 
XET C6  C16 C 0 1 Y N N N N N -13.266 5.057  44.109 4.406   -0.601 -0.466 C6  XET 16 
XET C7  C17 C 0 1 Y N N N N N -13.254 6.244  43.402 5.117   0.574  -0.325 C7  XET 17 
XET C8  C18 C 0 1 Y N N N N N -12.453 6.351  42.285 6.492   0.534  -0.142 C8  XET 18 
XET C9  C19 C 0 1 Y N N N N N -11.613 5.319  41.891 7.148   -0.687 -0.095 C9  XET 19 
XET O10 O1  O 0 1 N N N N N N -12.517 7.509  41.567 7.194   1.690  -0.004 O10 XET 20 
XET F12 F1  F 0 1 N N N N N N -11.799 9.524  41.063 5.502   2.923  0.968  F12 XET 21 
XET F13 F2  F 0 1 N N N N N N -11.642 8.799  43.066 7.324   3.993  0.100  F13 XET 22 
XET F14 F3  F 0 1 N N N N N N -10.385 8.067  41.624 5.806   3.008  -1.295 F14 XET 23 
XET N16 N1  N 0 1 N N N N N N -15.134 5.897  45.624 2.245   -0.596 0.638  N16 XET 24 
XET N18 N2  N 0 1 Y N N N N N -15.909 7.822  46.593 0.283   -0.603 1.899  N18 XET 25 
XET N22 N3  N 0 1 Y N N N N N -13.573 7.252  46.600 0.167   -0.500 -0.416 N22 XET 26 
XET O24 O2  O 0 1 N N N N N N -15.102 11.234 48.677 -3.834  -0.373 2.001  O24 XET 27 
XET N25 N4  N 0 1 N N N N N N -12.900 10.890 48.858 -4.017  -0.527 -0.207 N25 XET 28 
XET C29 C20 C 0 1 N N N N N N -12.987 13.539 48.940 -6.514  -0.849 0.489  C29 XET 29 
XET N30 N5  N 0 1 N N N N N N -13.312 13.943 50.336 -7.348  0.213  -0.112 N30 XET 30 
XET C31 C21 C 0 1 N N N N N N -13.079 12.570 50.867 -6.148  0.937  -0.580 C31 XET 31 
XET S32 S1  S 0 1 N N N N N N -14.544 14.905 50.796 -8.979  0.483  -0.220 S32 XET 32 
XET O33 O3  O 0 1 N N N N N N -14.316 15.212 52.171 -9.126  1.277  -1.389 O33 XET 33 
XET O34 O4  O 0 1 N N N N N N -14.618 15.969 49.846 -9.555  -0.813 -0.138 O34 XET 34 
XET C35 C22 C 0 1 N N N N N N -16.019 13.965 50.674 -9.375  1.452  1.262  C35 XET 35 
XET H47 H1  H 0 1 N N N N N N -14.677 3.932  45.199 2.642   0.360  -1.186 H47 XET 36 
XET H46 H2  H 0 1 N N N N N N -13.472 4.818  46.194 2.601   -1.418 -1.258 H46 XET 37 
XET H49 H3  H 0 1 N N N N N N -16.416 9.598  47.545 -1.502  -0.600 2.981  H49 XET 38 
XET H50 H4  H 0 1 N N N N N N -12.305 8.594  47.550 -1.716  -0.410 -1.310 H50 XET 39 
XET H51 H5  H 0 1 N N N N N N -11.191 9.558  49.097 -2.963  -1.511 -1.816 H51 XET 40 
XET H52 H6  H 0 1 N N N N N N -11.195 10.488 47.560 -3.505  0.184  -2.184 H52 XET 41 
XET H53 H7  H 0 1 N N N N N N -10.573 11.568 50.351 -5.672  -0.857 -2.665 H53 XET 42 
XET H54 H8  H 0 1 N N N N N N -10.433 12.459 48.798 -5.276  -2.308 -1.642 H54 XET 43 
XET H36 H9  H 0 1 N N N N N N -9.686  2.802  44.146 8.904   -2.443 -1.193 H36 XET 44 
XET H38 H10 H 0 1 N N N N N N -10.920 1.563  43.735 8.696   -4.208 -1.288 H38 XET 45 
XET H37 H11 H 0 1 N N N N N N -9.295  1.501  42.971 7.680   -3.138 -2.282 H37 XET 46 
XET H39 H12 H 0 1 N N N N N N -9.704  3.553  41.797 6.422   -3.992 -0.323 H39 XET 47 
XET H42 H13 H 0 1 N N N N N N -11.509 2.866  40.267 8.572   -2.537 1.282  H42 XET 48 
XET H41 H14 H 0 1 N N N N N N -10.371 1.540  40.682 7.111   -3.299 1.955  H41 XET 49 
XET H40 H15 H 0 1 N N N N N N -11.995 1.602  41.446 8.364   -4.302 1.187  H40 XET 50 
XET H43 H16 H 0 1 N N N N N N -12.364 3.129  44.323 4.505   -2.736 -0.533 H43 XET 51 
XET H44 H17 H 0 1 N N N N N N -13.864 7.077  43.720 4.604   1.524  -0.359 H44 XET 52 
XET H45 H18 H 0 1 N N N N N N -11.001 5.430  41.008 8.217   -0.721 0.052  H45 XET 53 
XET H48 H19 H 0 1 N N N N N N -15.514 6.177  44.743 2.771   -0.642 1.452  H48 XET 54 
XET H56 H20 H 0 1 N N N N N N -12.205 14.147 48.462 -6.895  -1.856 0.322  H56 XET 55 
XET H55 H21 H 0 1 N N N N N N -13.858 13.471 48.272 -6.244  -0.660 1.528  H55 XET 56 
XET H58 H22 H 0 1 N N N N N N -13.996 12.028 51.143 -5.766  1.666  0.136  H58 XET 57 
XET H57 H23 H 0 1 N N N N N N -12.360 12.520 51.698 -6.240  1.337  -1.589 H57 XET 58 
XET H60 H24 H 0 1 N N N N N N -16.876 14.585 50.978 -8.807  2.382  1.251  H60 XET 59 
XET H59 H25 H 0 1 N N N N N N -16.157 13.633 49.634 -10.442 1.677  1.273  H59 XET 60 
XET H61 H26 H 0 1 N N N N N N -15.950 13.087 51.333 -9.116  0.878  2.151  H61 XET 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XET C1  C2  SING N N 1  
XET C2  C3  SING N N 2  
XET C2  C4  SING N N 3  
XET C4  C5  DOUB Y N 4  
XET C4  C9  SING Y N 5  
XET C5  C6  SING Y N 6  
XET C6  C7  DOUB Y N 7  
XET C6  C15 SING N N 8  
XET C7  C8  SING Y N 9  
XET C8  C9  DOUB Y N 10 
XET C8  O10 SING N N 11 
XET O10 C11 SING N N 12 
XET C11 F12 SING N N 13 
XET C11 F13 SING N N 14 
XET C11 F14 SING N N 15 
XET C15 N16 SING N N 16 
XET N16 C17 SING N N 17 
XET C17 N18 DOUB Y N 18 
XET C17 N22 SING Y N 19 
XET N18 C19 SING Y N 20 
XET C19 C20 DOUB Y N 21 
XET C20 C21 SING Y N 22 
XET C20 C23 SING N N 23 
XET C21 N22 DOUB Y N 24 
XET C23 O24 DOUB N N 25 
XET C23 N25 SING N N 26 
XET N25 C26 SING N N 27 
XET N25 C28 SING N N 28 
XET C26 C27 SING N N 29 
XET C27 C28 SING N N 30 
XET C28 C29 SING N N 31 
XET C28 C31 SING N N 32 
XET C29 N30 SING N N 33 
XET N30 C31 SING N N 34 
XET N30 S32 SING N N 35 
XET S32 O33 DOUB N N 36 
XET S32 O34 DOUB N N 37 
XET S32 C35 SING N N 38 
XET C15 H47 SING N N 39 
XET C15 H46 SING N N 40 
XET C19 H49 SING N N 41 
XET C21 H50 SING N N 42 
XET C26 H51 SING N N 43 
XET C26 H52 SING N N 44 
XET C27 H53 SING N N 45 
XET C27 H54 SING N N 46 
XET C1  H36 SING N N 47 
XET C1  H38 SING N N 48 
XET C1  H37 SING N N 49 
XET C2  H39 SING N N 50 
XET C3  H42 SING N N 51 
XET C3  H41 SING N N 52 
XET C3  H40 SING N N 53 
XET C5  H43 SING N N 54 
XET C7  H44 SING N N 55 
XET C9  H45 SING N N 56 
XET N16 H48 SING N N 57 
XET C29 H56 SING N N 58 
XET C29 H55 SING N N 59 
XET C31 H58 SING N N 60 
XET C31 H57 SING N N 61 
XET C35 H60 SING N N 62 
XET C35 H59 SING N N 63 
XET C35 H61 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XET SMILES           ACDLabs              12.01 "O=S(C)(=O)N1CC2(CCN2C(=O)c2cnc(NCc3cc(cc(OC(F)(F)F)c3)C(C)C)nc2)C1"                                                                                                                  
XET InChI            InChI                1.06  "InChI=1S/C22H26F3N5O4S/c1-14(2)16-6-15(7-18(8-16)34-22(23,24)25)9-26-20-27-10-17(11-28-20)19(31)30-5-4-21(30)12-29(13-21)35(3,32)33/h6-8,10-11,14H,4-5,9,12-13H2,1-3H3,(H,26,27,28)" 
XET InChIKey         InChI                1.06  AJGQSOQDPFCOEY-UHFFFAOYSA-N                                                                                                                                                           
XET SMILES_CANONICAL CACTVS               3.385 "CC(C)c1cc(CNc2ncc(cn2)C(=O)N3CCC34CN(C4)[S](C)(=O)=O)cc(OC(F)(F)F)c1"                                                                                                                
XET SMILES           CACTVS               3.385 "CC(C)c1cc(CNc2ncc(cn2)C(=O)N3CCC34CN(C4)[S](C)(=O)=O)cc(OC(F)(F)F)c1"                                                                                                                
XET SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1cc(cc(c1)OC(F)(F)F)CNc2ncc(cn2)C(=O)N3CCC34CN(C4)S(=O)(=O)C"                                                                                                                  
XET SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)c1cc(cc(c1)OC(F)(F)F)CNc2ncc(cn2)C(=O)N3CCC34CN(C4)S(=O)(=O)C"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XET "SYSTEMATIC NAME" ACDLabs              12.01 "[6-(methanesulfonyl)-1,6-diazaspiro[3.3]heptan-1-yl][2-({[3-(propan-2-yl)-5-(trifluoromethoxy)phenyl]methyl}amino)pyrimidin-5-yl]methanone" 
XET "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6-methylsulfonyl-1,6-diazaspiro[3.3]heptan-1-yl)-[2-[[3-propan-2-yl-5-(trifluoromethyloxy)phenyl]methylamino]pyrimidin-5-yl]methanone"     
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XET "Create component" 2023-06-06 RCSB 
XET "Initial release"  2024-12-18 RCSB 
# 
