data_T6T
#

_chem_comp.id                                   T6T
_chem_comp.name                                 alpha-D-tagatopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-D-tagatose; D-tagatose; tagatose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-07-13
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       180.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    T6T
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5CI5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  T6T  alpha-D-tagatose  PDB  ?  
2  T6T  D-tagatose        PDB  ?  
3  T6T  tagatose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T6T  O3   O4      O  0  1  N  N  N  61.534  61.291  82.766  -0.066   1.714  -1.075  O3   T6T   1  
T6T  C3   C4      C  0  1  N  N  S  62.540  60.797  81.888   0.000   1.117   0.221  C3   T6T   2  
T6T  C4   C3      C  0  1  N  N  S  63.255  61.985  81.245  -1.354   0.487   0.565  C4   T6T   3  
T6T  O4   O3      O  0  1  N  N  N  62.299  62.852  80.620  -2.376   1.482   0.489  O4   T6T   4  
T6T  C5   C2      C  0  1  N  N  R  64.021  62.713  82.328  -1.652  -0.633  -0.437  C5   T6T   5  
T6T  O5   O2      O  0  1  N  N  N  64.718  63.831  81.775  -2.878  -1.276  -0.084  O5   T6T   6  
T6T  C6   C1      C  0  1  N  N  N  64.983  61.759  83.028  -0.511  -1.653  -0.405  C6   T6T   7  
T6T  O6   O5      O  0  1  N  N  N  64.237  60.689  83.606   0.722  -0.997  -0.702  O6   T6T   8  
T6T  C2   C5      C  0  1  N  N  S  63.489  59.930  82.651   1.077   0.028   0.228  C2   T6T   9  
T6T  O2   "O5'"   O  0  1  N  Y  N  64.393  59.293  81.740   1.179  -0.532   1.539  O2   T6T  10  
T6T  C1   C6      C  0  1  N  N  N  62.739  58.833  83.438   2.421   0.638  -0.172  C1   T6T  11  
T6T  O1   O6      O  0  1  N  N  N  61.912  58.054  82.654   3.426  -0.377  -0.166  O1   T6T  12  
T6T  HO3  HO4     H  0  1  N  Y  N  61.082  60.561  83.173  -0.729   2.414  -1.152  HO3  T6T  13  
T6T  H3   HAF     H  0  1  N  N  N  62.076  60.198  81.090   0.247   1.878   0.962  H3   T6T  14  
T6T  H4   H3      H  0  1  N  N  N  63.967  61.607  80.497  -1.319   0.074   1.573  H4   T6T  15  
T6T  HO4  HO3     H  0  1  N  Y  N  62.750  63.588  80.223  -3.262   1.152   0.694  HO4  T6T  16  
T6T  H5   H2      H  0  1  N  N  N  63.297  63.072  83.075  -1.736  -0.212  -1.439  H5   T6T  17  
T6T  HO5  HO2     H  0  1  N  Y  N  65.195  64.280  82.463  -3.130  -1.997  -0.677  HO5  T6T  18  
T6T  H61  H11     H  0  1  N  N  N  65.700  61.356  82.297  -0.454  -2.103   0.586  H61  T6T  19  
T6T  H62  H12     H  0  1  N  N  N  65.527  62.298  83.818  -0.698  -2.430  -1.146  H62  T6T  20  
T6T  HO2  "HO5'"  H  0  1  N  Y  N  64.996  58.742  82.225   1.844  -1.230   1.617  HO2  T6T  21  
T6T  H11  H61     H  0  1  N  N  N  63.483  58.178  83.915   2.343   1.066  -1.172  H11  T6T  22  
T6T  H12  H62     H  0  1  N  N  N  62.127  59.318  84.213   2.691   1.421   0.537  H12  T6T  23  
T6T  HO1  HO6     H  0  1  N  Y  N  61.483  57.402  83.196   4.307  -0.062  -0.411  HO1  T6T  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T6T  O4  C4   SING  N  N   1  
T6T  C4  C3   SING  N  N   2  
T6T  C4  C5   SING  N  N   3  
T6T  O2  C2   SING  N  N   4  
T6T  O5  C5   SING  N  N   5  
T6T  C3  C2   SING  N  N   6  
T6T  C3  O3   SING  N  N   7  
T6T  C5  C6   SING  N  N   8  
T6T  C2  C1   SING  N  N   9  
T6T  C2  O6   SING  N  N  10  
T6T  O1  C1   SING  N  N  11  
T6T  C6  O6   SING  N  N  12  
T6T  O3  HO3  SING  N  N  13  
T6T  C3  H3   SING  N  N  14  
T6T  C4  H4   SING  N  N  15  
T6T  O4  HO4  SING  N  N  16  
T6T  C5  H5   SING  N  N  17  
T6T  O5  HO5  SING  N  N  18  
T6T  C6  H61  SING  N  N  19  
T6T  C6  H62  SING  N  N  20  
T6T  O2  HO2  SING  N  N  21  
T6T  C1  H11  SING  N  N  22  
T6T  C1  H12  SING  N  N  23  
T6T  O1  HO1  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T6T  SMILES            ACDLabs               12.01  "OC1C(OCC(C1O)O)(CO)O"  
T6T  InChI             InChI                 1.03   "InChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4+,5+,6+/m1/s1"  
T6T  InChIKey          InChI                 1.03   LKDRXBCSQODPBY-VANKVMQKSA-N  
T6T  SMILES_CANONICAL  CACTVS                3.385  "OC[C@]1(O)OC[C@@H](O)[C@H](O)[C@@H]1O"  
T6T  SMILES            CACTVS                3.385  "OC[C]1(O)OC[CH](O)[CH](O)[CH]1O"  
T6T  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1[C@H]([C@@H]([C@@H]([C@@](O1)(CO)O)O)O)O"  
T6T  SMILES            "OpenEye OEToolkits"  2.0.6  "C1C(C(C(C(O1)(CO)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T6T  "SYSTEMATIC NAME"                      ACDLabs               12.01  alpha-D-tagatopyranose  
T6T  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  2.0.6  "(2~{S},3~{S},4~{S},5~{R})-2-(hydroxymethyl)oxane-2,3,4,5-tetrol"  
T6T  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DTagpa  
T6T  "COMMON NAME"                          GMML                  1.0    a-D-tagatopyranose  
T6T  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-Tagp  
T6T  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Tag  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
T6T  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
T6T  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
T6T  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
T6T  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  ketose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T6T  "Create component"          2015-07-13  RCSB  
T6T  "Initial release"           2015-07-22  RCSB  
T6T  "Modify atom id"            2017-11-07  RCSB  
T6T  "Other modification"        2019-08-12  RCSB  
T6T  "Other modification"        2019-12-19  RCSB  
T6T  "Other modification"        2020-07-03  RCSB  
T6T  "Modify synonyms"           2020-07-17  RCSB  
T6T  "Modify atom id"            2020-07-17  RCSB  
T6T  "Modify component atom id"  2020-07-17  RCSB  
##
