data_T0T
# 
_chem_comp.id                                    T0T 
_chem_comp.name                                  "(1R)-1-{4-[(E)-2-(2-aminophenyl)ethenyl]phenyl}-1,4-anhydro-2-deoxy-5-O-phosphonato-D-erythro-pentitol" 
_chem_comp.type                                  "DNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C19 H22 N O6 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-06-24 
_chem_comp.pdbx_modified_date                    2014-11-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        391.355 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T0T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4UQG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T0T P      P      P 0 1 N N N -27.511 -22.535 12.067 -5.270 2.276  -0.221 P      T0T 1  
T0T C1     C1     C 0 1 Y N N -29.444 -18.307 14.742 -0.181 -1.940 -0.349 C1     T0T 2  
T0T C2     C2     C 0 1 Y N N -28.242 -19.002 14.937 0.733  -2.846 -0.858 C2     T0T 3  
T0T C3     C3     C 0 1 Y N N -27.639 -19.030 16.209 2.076  -2.535 -0.882 C3     T0T 4  
T0T C4     C4     C 0 1 Y N N -28.214 -18.357 17.292 2.514  -1.302 -0.391 C4     T0T 5  
T0T C5     C5     C 0 1 Y N N -29.394 -17.655 17.083 1.585  -0.392 0.121  C5     T0T 6  
T0T C6     C6     C 0 1 Y N N -30.005 -17.618 15.822 0.244  -0.717 0.139  C6     T0T 7  
T0T C7     C7     C 0 1 N N N -27.645 -18.348 18.677 3.948  -0.963 -0.413 C7     T0T 8  
T0T C8     C8     C 0 1 N N N -26.528 -18.981 19.035 4.365  0.224  0.059  C8     T0T 9  
T0T C9     C9     C 0 1 Y N N -25.948 -18.974 20.420 5.797  0.562  0.037  C9     T0T 10 
T0T "C1'"  "C1'"  C 0 1 N N R -30.148 -18.249 13.425 -1.648 -2.285 -0.331 "C1'"  T0T 11 
T0T C10    C10    C 0 1 Y N N -24.781 -19.746 20.516 6.726  -0.346 -0.474 C10    T0T 12 
T0T C11    C11    C 0 1 Y N N -24.096 -19.835 21.734 8.067  -0.022 -0.492 C11    T0T 13 
T0T C12    C12    C 0 1 Y N N -24.577 -19.196 22.876 8.498  1.200  -0.004 C12    T0T 14 
T0T C13    C13    C 0 1 Y N N -25.756 -18.443 22.812 7.590  2.109  0.505  C13    T0T 15 
T0T C14    C14    C 0 1 Y N N -26.476 -18.349 21.595 6.237  1.804  0.525  C14    T0T 16 
T0T N15    N15    N 0 1 N N N -27.608 -17.501 21.604 5.319  2.721  1.033  N15    T0T 17 
T0T "C2'"  "C2'"  C 0 1 N N N -29.347 -17.662 12.305 -2.079 -2.764 1.079  "C2'"  T0T 18 
T0T "C3'"  "C3'"  C 0 1 N N S -29.828 -18.452 11.078 -3.595 -2.450 1.078  "C3'"  T0T 19 
T0T "O3'"  "O3'"  O 0 1 N N N -30.997 -17.966 10.496 -4.349 -3.621 0.760  "O3'"  T0T 20 
T0T "C4'"  "C4'"  C 0 1 N N R -30.010 -19.815 11.634 -3.760 -1.386 -0.025 "C4'"  T0T 21 
T0T "O4'"  "O4'"  O 0 1 N N N -30.459 -19.610 13.002 -2.451 -1.104 -0.546 "O4'"  T0T 22 
T0T "C5'"  "C5'"  C 0 1 N N N -28.660 -20.435 11.629 -4.370 -0.113 0.567  "C5'"  T0T 23 
T0T "O5'"  "O5'"  O 0 1 N N N -28.714 -21.774 11.402 -4.627 0.823  -0.481 "O5'"  T0T 24 
T0T OP1    OP1    O 0 1 N N N -27.595 -24.002 11.659 -5.537 3.005  -1.631 OP1    T0T 25 
T0T OP2    OP2    O 0 1 N N N -26.256 -21.760 11.864 -6.549 2.126  0.508  OP2    T0T 26 
T0T OP3    OP3    O 0 1 N N N -27.909 -22.396 13.607 -4.253 3.163  0.658  OP3    T0T 27 
T0T H2     H2     H 0 1 N N N -27.777 -19.517 14.109 0.393  -3.798 -1.237 H2     T0T 28 
T0T H3     H3     H 0 1 N N N -26.720 -19.579 16.350 2.789  -3.243 -1.280 H3     T0T 29 
T0T H5     H5     H 0 1 N N N -29.850 -17.127 17.908 1.916  0.563  0.502  H5     T0T 30 
T0T H6     H6     H 0 1 N N N -30.915 -17.054 15.683 -0.475 -0.015 0.535  H6     T0T 31 
T0T H7     H7     H 0 1 N N N -28.175 -17.792 19.436 4.663  -1.668 -0.810 H7     T0T 32 
T0T H8     H8     H 0 1 N N N -26.002 -19.539 18.274 3.649  0.929  0.456  H8     T0T 33 
T0T "H1'"  "H1'"  H 0 1 N N N -31.080 -17.676 13.540 -1.872 -3.045 -1.080 "H1'"  T0T 34 
T0T H10    H10    H 0 1 N N N -24.410 -20.273 19.649 6.396  -1.301 -0.855 H10    T0T 35 
T0T H11    H11    H 0 1 N N N -23.182 -20.407 21.790 8.785  -0.726 -0.887 H11    T0T 36 
T0T H12    H12    H 0 1 N N N -24.041 -19.282 23.809 9.549  1.444  -0.022 H12    T0T 37 
T0T H13    H13    H 0 1 N N N -26.118 -17.933 23.692 7.934  3.060  0.884  H13    T0T 38 
T0T HN15   HN15   H 0 0 N N N -27.783 -17.187 22.537 4.374  2.504  1.050  HN15   T0T 39 
T0T HN1A   HN1A   H 0 0 N N N -27.438 -16.712 21.014 5.626  3.578  1.369  HN1A   T0T 40 
T0T "H2'"  "H2'"  H 0 1 N N N -29.557 -16.588 12.190 -1.904 -3.833 1.197  "H2'"  T0T 41 
T0T "H2'A" "H2'A" H 0 0 N N N -28.270 -17.809 12.471 -1.565 -2.198 1.856  "H2'A" T0T 42 
T0T "H3'"  "H3'"  H 0 1 N N N -29.014 -18.472 10.339 -3.902 -2.050 2.045  "H3'"  T0T 43 
T0T "HO3'" "HO3'" H 0 0 N N N -31.227 -18.505 9.748  -4.236 -4.345 1.391  "HO3'" T0T 44 
T0T "H4'"  "H4'"  H 0 1 N N N -30.729 -20.402 11.045 -4.400 -1.771 -0.819 "H4'"  T0T 45 
T0T "H5'"  "H5'"  H 0 1 N N N -28.057 -19.965 10.838 -5.305 -0.359 1.072  "H5'"  T0T 46 
T0T "H5'A" "H5'A" H 0 0 N N N -28.185 -20.260 12.606 -3.674 0.324  1.283  "H5'A" T0T 47 
T0T H21    H21    H 0 1 N N N -26.764 -24.277 11.290 -5.925 3.888  -1.550 H21    T0T 48 
T0T H23    H23    H 0 1 N N N -27.267 -21.856 14.053 -3.392 3.303  0.241  H23    T0T 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T0T P     "O5'"  SING N N 1  
T0T P     OP1    SING N N 2  
T0T P     OP2    DOUB N N 3  
T0T P     OP3    SING N N 4  
T0T C1    C2     DOUB Y N 5  
T0T C1    C6     SING Y N 6  
T0T C1    "C1'"  SING N N 7  
T0T C2    C3     SING Y N 8  
T0T C3    C4     DOUB Y N 9  
T0T C4    C5     SING Y N 10 
T0T C4    C7     SING N N 11 
T0T C5    C6     DOUB Y N 12 
T0T C7    C8     DOUB N E 13 
T0T C8    C9     SING N N 14 
T0T C9    C10    DOUB Y N 15 
T0T C9    C14    SING Y N 16 
T0T "C1'" "C2'"  SING N N 17 
T0T "C1'" "O4'"  SING N N 18 
T0T C10   C11    SING Y N 19 
T0T C11   C12    DOUB Y N 20 
T0T C12   C13    SING Y N 21 
T0T C13   C14    DOUB Y N 22 
T0T C14   N15    SING N N 23 
T0T "C2'" "C3'"  SING N N 24 
T0T "C3'" "O3'"  SING N N 25 
T0T "C3'" "C4'"  SING N N 26 
T0T "C4'" "O4'"  SING N N 27 
T0T "C4'" "C5'"  SING N N 28 
T0T "C5'" "O5'"  SING N N 29 
T0T C2    H2     SING N N 30 
T0T C3    H3     SING N N 31 
T0T C5    H5     SING N N 32 
T0T C6    H6     SING N N 33 
T0T C7    H7     SING N N 34 
T0T C8    H8     SING N N 35 
T0T "C1'" "H1'"  SING N N 36 
T0T C10   H10    SING N N 37 
T0T C11   H11    SING N N 38 
T0T C12   H12    SING N N 39 
T0T C13   H13    SING N N 40 
T0T N15   HN15   SING N N 41 
T0T N15   HN1A   SING N N 42 
T0T "C2'" "H2'"  SING N N 43 
T0T "C2'" "H2'A" SING N N 44 
T0T "C3'" "H3'"  SING N N 45 
T0T "O3'" "HO3'" SING N N 46 
T0T "C4'" "H4'"  SING N N 47 
T0T "C5'" "H5'"  SING N N 48 
T0T "C5'" "H5'A" SING N N 49 
T0T OP1   H21    SING N N 50 
T0T OP3   H23    SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T0T SMILES           ACDLabs              12.01 "O=P(O)(OCC3OC(c2ccc(\C=C\c1ccccc1N)cc2)CC3O)O"                                                                                                                           
T0T InChI            InChI                1.03  "InChI=1S/C19H22NO6P/c20-16-4-2-1-3-14(16)8-5-13-6-9-15(10-7-13)18-11-17(21)19(26-18)12-25-27(22,23)24/h1-10,17-19,21H,11-12,20H2,(H2,22,23,24)/b8-5+/t17-,18+,19+/m0/s1" 
T0T InChIKey         InChI                1.03  NAVOUHWZGHPJBG-YOKLGZCWSA-N                                                                                                                                               
T0T SMILES_CANONICAL CACTVS               3.385 "Nc1ccccc1/C=C/c2ccc(cc2)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3"                                                                                                          
T0T SMILES           CACTVS               3.385 "Nc1ccccc1C=Cc2ccc(cc2)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3"                                                                                                                
T0T SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)/C=C/c2ccc(cc2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N"                                                                                                        
T0T SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)C=Cc2ccc(cc2)C3CC(C(O3)COP(=O)(O)O)O)N"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
T0T "SYSTEMATIC NAME" ACDLabs              12.01 "(1R)-1-{4-[(E)-2-(2-aminophenyl)ethenyl]phenyl}-1,4-anhydro-2-deoxy-5-O-phosphono-D-erythro-pentitol"      
T0T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,5R)-5-[4-[(E)-2-(2-aminophenyl)ethenyl]phenyl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T0T "Create component" 2014-06-24 EBI  
T0T "Initial release"  2014-12-03 RCSB 
# 
