data_R0T
# 
_chem_comp.id                                    R0T 
_chem_comp.name                                  "4-methyl-~{N}-[3-(4-methylimidazol-1-yl)-5-(trifluoromethyl)phenyl]-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H24 F3 N9 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-21 
_chem_comp.pdbx_modified_date                    2023-03-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        583.566 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R0T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BOH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R0T N1  N1  N 0 1 Y N N -80.659 -18.627 81.624 -7.967 -0.108 -0.973 N1  R0T 1  
R0T N3  N2  N 0 1 N N N -86.826 -19.315 89.654 1.870  -1.712 -0.686 N3  R0T 2  
R0T C4  C1  C 0 1 Y N N -81.950 -20.023 84.771 -4.569 -0.988 -0.192 C4  R0T 3  
R0T C5  C2  C 0 1 Y N N -84.090 -20.683 85.900 -2.881 -2.679 -0.489 C5  R0T 4  
R0T C6  C3  C 0 1 Y N N -84.544 -19.735 86.818 -1.838 -1.785 -0.678 C6  R0T 5  
R0T C7  C4  C 0 1 Y N N -85.317 -20.094 87.923 -0.520 -2.218 -0.535 C7  R0T 6  
R0T C8  C5  C 0 1 N N N -85.939 -18.978 88.693 0.597  -1.271 -0.735 C8  R0T 7  
R0T C10 C6  C 0 1 Y N N -88.195 -18.896 91.572 4.117  -1.104 -0.047 C10 R0T 8  
R0T C13 C7  C 0 1 Y N N -91.180 -19.412 94.887 7.916  -1.539 1.729  C13 R0T 9  
R0T C15 C8  C 0 1 Y N N -91.042 -18.768 93.696 6.656  -1.660 1.268  C15 R0T 10 
R0T C17 C9  C 0 1 Y N N -88.857 -16.342 90.679 3.829  1.332  -1.342 C17 R0T 11 
R0T C20 C10 C 0 1 Y N N -85.552 -21.444 88.151 -0.260 -3.549 -0.203 C20 R0T 12 
R0T C21 C11 C 0 1 Y N N -85.030 -22.400 87.302 -1.305 -4.431 -0.018 C21 R0T 13 
R0T C22 C12 C 0 1 Y N N -84.301 -22.053 86.159 -2.611 -4.002 -0.159 C22 R0T 14 
R0T C24 C13 C 0 1 Y N N -79.884 -20.132 85.752 -4.045 1.001  0.868  C24 R0T 15 
R0T C26 C14 C 0 1 Y N N -77.732 -20.409 86.996 -1.732 1.351  1.752  C26 R0T 16 
R0T C28 C15 C 0 1 Y N N -77.758 -21.255 89.201 -1.238 3.390  2.893  C28 R0T 17 
R0T N   N3  N 0 1 Y N N -79.588 -18.825 82.439 -7.487 1.026  -0.306 N   R0T 18 
R0T C   C16 C 0 1 N N N -78.239 -18.430 82.033 -8.249 2.246  -0.027 C   R0T 19 
R0T O   O1  O 0 1 N N N -85.690 -17.815 88.405 0.368  -0.096 -0.942 O   R0T 20 
R0T C1  C17 C 0 1 Y N N -81.714 -19.059 82.279 -7.027 -1.006 -1.047 C1  R0T 21 
R0T C11 C18 C 0 1 Y N N -89.057 -18.097 92.316 5.163  -0.194 -0.056 C11 R0T 22 
R0T C12 C19 C 0 1 Y N N -89.063 -19.165 94.582 7.471  0.286  0.664  C12 R0T 23 
R0T C14 C20 C 0 1 N N N -92.434 -19.872 95.566 8.666  -2.571 2.530  C14 R0T 24 
R0T C16 C21 C 0 1 Y N N -89.391 -16.824 91.876 5.016  1.025  -0.705 C16 R0T 25 
R0T C18 C22 C 0 1 N N N -89.140 -14.949 90.229 3.673  2.655  -2.046 C18 R0T 26 
R0T C19 C23 C 0 1 Y N N -88.000 -17.152 89.916 2.788  0.423  -1.344 C19 R0T 27 
R0T C2  C24 C 0 1 Y N N -79.978 -19.373 83.628 -6.188 0.798  0.041  C2  R0T 28 
R0T C23 C25 C 0 1 N N N -83.733 -23.120 85.259 -3.747 -4.972 0.046  C23 R0T 29 
R0T C25 C26 C 0 1 Y N N -79.120 -20.494 86.954 -3.036 1.821  1.580  C25 R0T 30 
R0T C27 C27 C 0 1 Y N N -77.040 -20.792 88.126 -0.827 2.156  2.424  C27 R0T 31 
R0T C29 C28 C 0 1 Y N N -79.745 -20.985 88.092 -3.374 3.075  2.088  C29 R0T 32 
R0T C3  C29 C 0 1 Y N N -81.356 -19.537 83.564 -5.870 -0.494 -0.422 C3  R0T 33 
R0T C9  C30 C 0 1 Y N N -87.682 -18.434 90.364 2.927  -0.796 -0.692 C9  R0T 34 
R0T F   F1  F 0 1 N N N -89.426 -14.896 88.943 2.354  3.102  -1.912 F   R0T 35 
R0T F1  F2  F 0 1 N N N -90.130 -14.364 90.896 4.542  3.591  -1.476 F1  R0T 36 
R0T F2  F3  F 0 1 N N N -88.114 -14.149 90.418 3.978  2.500  -3.402 F2  R0T 37 
R0T N2  N4  N 0 1 N N N -83.258 -20.376 84.841 -4.205 -2.249 -0.625 N2  R0T 38 
R0T N4  N5  N 0 1 Y N N -89.680 -18.624 93.492 6.369  -0.504 0.590  N4  R0T 39 
R0T N5  N6  N 0 1 Y N N -89.919 -19.654 95.452 8.389  -0.344 1.347  N5  R0T 40 
R0T N6  N7  N 0 1 Y N N -81.215 -20.317 85.831 -3.703 -0.214 0.449  N6  R0T 41 
R0T N7  N8  N 0 1 Y N N -79.095 -21.361 89.207 -2.478 3.805  2.720  N7  R0T 42 
R0T N8  N9  N 0 1 Y N N -79.208 -19.655 84.687 -5.254 1.503  0.674  N8  R0T 43 
R0T H6  H1  H 0 1 N N N -86.886 -20.285 89.889 2.053  -2.663 -0.647 H6  R0T 44 
R0T H5  H2  H 0 1 N N N -84.290 -18.696 86.669 -2.046 -0.757 -0.935 H5  R0T 45 
R0T H7  H3  H 0 1 N N N -87.923 -19.877 91.933 4.230  -2.053 0.457  H7  R0T 46 
R0T H12 H4  H 0 1 N N N -91.835 -18.436 93.042 5.999  -2.506 1.405  H12 R0T 47 
R0T H15 H5  H 0 1 N N N -86.148 -21.748 88.999 0.759  -3.889 -0.093 H15 R0T 48 
R0T H16 H6  H 0 1 N N N -85.189 -23.444 87.526 -1.101 -5.460 0.239  H16 R0T 49 
R0T H20 H7  H 0 1 N N N -77.192 -20.040 86.137 -1.438 0.382  1.376  H20 R0T 50 
R0T H22 H8  H 0 1 N N N -77.218 -21.549 90.089 -0.535 4.020  3.417  H22 R0T 51 
R0T H1  H9  H 0 1 N N N -78.274 -17.984 81.028 -8.747 2.151  0.938  H1  R0T 52 
R0T H2  H10 H 0 1 N N N -77.842 -17.694 82.748 -7.572 3.100  -0.005 H2  R0T 53 
R0T H   H11 H 0 1 N N N -77.587 -19.316 82.018 -8.995 2.394  -0.808 H   R0T 54 
R0T H3  H12 H 0 1 N N N -82.721 -19.051 81.889 -7.117 -1.978 -1.508 H3  R0T 55 
R0T H8  H13 H 0 1 N N N -87.992 -19.189 94.715 7.573  1.270  0.230  H8  R0T 56 
R0T H11 H14 H 0 1 N N N -92.176 -20.386 96.504 8.493  -2.402 3.593  H11 R0T 57 
R0T H10 H15 H 0 1 N N N -93.071 -19.003 95.787 8.316  -3.567 2.259  H10 R0T 58 
R0T H9  H16 H 0 1 N N N -92.976 -20.565 94.905 9.732  -2.491 2.319  H9  R0T 59 
R0T H13 H17 H 0 1 N N N -90.061 -16.208 92.457 5.831  1.734  -0.712 H13 R0T 60 
R0T H14 H18 H 0 1 N N N -87.589 -16.784 88.987 1.863  0.663  -1.846 H14 R0T 61 
R0T H19 H19 H 0 1 N N N -82.725 -23.394 85.605 -3.992 -5.449 -0.903 H19 R0T 62 
R0T H17 H20 H 0 1 N N N -84.383 -24.007 85.286 -3.450 -5.732 0.769  H17 R0T 63 
R0T H18 H21 H 0 1 N N N -83.676 -22.738 84.229 -4.619 -4.436 0.420  H18 R0T 64 
R0T H21 H22 H 0 1 N N N -75.962 -20.729 88.164 0.188  1.823  2.580  H21 R0T 65 
R0T H23 H23 H 0 1 N N N -80.822 -21.070 88.081 -4.378 3.451  1.962  H23 R0T 66 
R0T H4  H24 H 0 1 N N N -83.709 -20.423 83.950 -4.867 -2.835 -1.023 H4  R0T 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R0T N1  C1  DOUB Y N 1  
R0T N1  N   SING Y N 2  
R0T C   N   SING N N 3  
R0T C1  C3  SING Y N 4  
R0T N   C2  SING Y N 5  
R0T C3  C2  DOUB Y N 6  
R0T C3  C4  SING Y N 7  
R0T C2  N8  SING Y N 8  
R0T N8  C24 DOUB Y N 9  
R0T C4  N2  SING N N 10 
R0T C4  N6  DOUB Y N 11 
R0T N2  C5  SING N N 12 
R0T C23 C22 SING N N 13 
R0T C24 N6  SING Y N 14 
R0T C24 C25 SING N N 15 
R0T C5  C22 DOUB Y N 16 
R0T C5  C6  SING Y N 17 
R0T C22 C21 SING Y N 18 
R0T C6  C7  DOUB Y N 19 
R0T C25 C26 DOUB Y N 20 
R0T C25 C29 SING Y N 21 
R0T C26 C27 SING Y N 22 
R0T C21 C20 DOUB Y N 23 
R0T C7  C20 SING Y N 24 
R0T C7  C8  SING N N 25 
R0T C29 N7  DOUB Y N 26 
R0T C27 C28 DOUB Y N 27 
R0T O   C8  DOUB N N 28 
R0T C8  N3  SING N N 29 
R0T F   C18 SING N N 30 
R0T C28 N7  SING Y N 31 
R0T N3  C9  SING N N 32 
R0T C19 C9  DOUB Y N 33 
R0T C19 C17 SING Y N 34 
R0T C18 F2  SING N N 35 
R0T C18 C17 SING N N 36 
R0T C18 F1  SING N N 37 
R0T C9  C10 SING Y N 38 
R0T C17 C16 DOUB Y N 39 
R0T C10 C11 DOUB Y N 40 
R0T C16 C11 SING Y N 41 
R0T C11 N4  SING N N 42 
R0T N4  C15 SING Y N 43 
R0T N4  C12 SING Y N 44 
R0T C15 C13 DOUB Y N 45 
R0T C12 N5  DOUB Y N 46 
R0T C13 N5  SING Y N 47 
R0T C13 C14 SING N N 48 
R0T N3  H6  SING N N 49 
R0T C6  H5  SING N N 50 
R0T C10 H7  SING N N 51 
R0T C15 H12 SING N N 52 
R0T C20 H15 SING N N 53 
R0T C21 H16 SING N N 54 
R0T C26 H20 SING N N 55 
R0T C28 H22 SING N N 56 
R0T C   H1  SING N N 57 
R0T C   H2  SING N N 58 
R0T C   H   SING N N 59 
R0T C1  H3  SING N N 60 
R0T C12 H8  SING N N 61 
R0T C14 H11 SING N N 62 
R0T C14 H10 SING N N 63 
R0T C14 H9  SING N N 64 
R0T C16 H13 SING N N 65 
R0T C19 H14 SING N N 66 
R0T C23 H19 SING N N 67 
R0T C23 H17 SING N N 68 
R0T C23 H18 SING N N 69 
R0T C27 H21 SING N N 70 
R0T C29 H23 SING N N 71 
R0T N2  H4  SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R0T InChI            InChI                1.06    "InChI=1S/C30H24F3N9O/c1-17-6-7-19(29(43)37-22-10-21(30(31,32)33)11-23(12-22)42-15-18(2)35-16-42)9-25(17)38-27-24-14-36-41(3)28(24)40-26(39-27)20-5-4-8-34-13-20/h4-16H,1-3H3,(H,37,43)(H,38,39,40)" 
R0T InChIKey         InChI                1.06    PURQMMYVBMISCI-UHFFFAOYSA-N                                                                                                                                                                          
R0T SMILES_CANONICAL CACTVS               3.385   "Cn1ncc2c(Nc3cc(ccc3C)C(=O)Nc4cc(cc(c4)C(F)(F)F)n5cnc(C)c5)nc(nc12)c6cccnc6"                                                                                                                         
R0T SMILES           CACTVS               3.385   "Cn1ncc2c(Nc3cc(ccc3C)C(=O)Nc4cc(cc(c4)C(F)(F)F)n5cnc(C)c5)nc(nc12)c6cccnc6"                                                                                                                         
R0T SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(cc1Nc2c3cnn(c3nc(n2)c4cccnc4)C)C(=O)Nc5cc(cc(c5)n6cc(nc6)C)C(F)(F)F"                                                                                                                         
R0T SMILES           "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(cc1Nc2c3cnn(c3nc(n2)c4cccnc4)C)C(=O)Nc5cc(cc(c5)n6cc(nc6)C)C(F)(F)F"                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           R0T 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "4-methyl-~{N}-[3-(4-methylimidazol-1-yl)-5-(trifluoromethyl)phenyl]-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R0T "Create component" 2022-11-21 PDBE 
R0T "Initial release"  2023-03-08 RCSB 
# 
