data_N0T
#

_chem_comp.id                                   N0T
_chem_comp.name                                 "(1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H29 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-11-04
_chem_comp.pdbx_modified_date                   2020-08-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       275.384
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N0T
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6TBF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N0T  C4   C1   C  0  1  N  N  R  63.495  28.421  33.417   2.205  -0.154   0.875  C4   N0T   1  
N0T  C5   C2   C  0  1  N  N  R  63.064  29.049  34.779   3.375   0.841   0.722  C5   N0T   2  
N0T  C6   C3   C  0  1  N  N  S  61.882  28.185  35.258   4.206   0.273  -0.455  C6   N0T   3  
N0T  C7   C4   C  0  1  N  N  N  72.478  32.356  33.329  -8.883   0.211  -0.649  C7   N0T   4  
N0T  C8   C5   C  0  1  N  N  N  64.079  29.312  35.839   2.850   2.237   0.383  C8   N0T   5  
N0T  C15  C6   C  0  1  N  N  N  66.017  28.485  33.387  -0.210  -0.210   0.713  C15  N0T   6  
N0T  C2   C7   C  0  1  N  N  S  61.197  27.981  33.927   4.123  -1.257  -0.225  C2   N0T   7  
N0T  C3   C8   C  0  1  N  N  S  62.332  27.505  33.057   2.681  -1.487   0.272  C3   N0T   8  
N0T  N7   N1   N  0  1  N  N  N  64.801  27.616  33.545   1.029   0.337   0.145  N7   N0T   9  
N0T  O9   O1   O  0  1  N  N  N  63.536  29.981  37.004   3.938   3.163   0.361  O9   N0T  10  
N0T  O10  O2   O  0  1  N  N  N  62.380  26.914  35.716   3.618   0.629  -1.708  O10  N0T  11  
N0T  O11  O3   O  0  1  N  N  N  60.097  27.040  33.990   4.348  -1.959  -1.449  O11  N0T  12  
N0T  O12  O4   O  0  1  N  N  N  61.972  27.480  31.664   2.665  -2.509   1.271  O12  N0T  13  
N0T  C16  C9   C  0  1  N  N  N  67.273  27.589  33.429  -1.410   0.322  -0.072  C16  N0T  14  
N0T  C17  C10  C  0  1  N  N  N  68.505  28.468  33.147  -2.701  -0.247   0.521  C17  N0T  15  
N0T  C18  C11  C  0  1  N  N  N  69.586  28.386  34.150  -3.901   0.285  -0.264  C18  N0T  16  
N0T  C19  C12  C  0  1  N  N  N  70.869  28.878  33.490  -5.191  -0.285   0.329  C19  N0T  17  
N0T  C20  C13  C  0  1  N  N  N  71.004  30.382  33.396  -6.392   0.248  -0.456  C20  N0T  18  
N0T  C1   C14  C  0  1  N  N  N  72.474  30.851  33.506  -7.682  -0.322   0.136  C1   N0T  19  
N0T  H1   H1   H  0  1  N  N  N  63.609  29.211  32.660   1.962  -0.285   1.929  H1   N0T  20  
N0T  H2   H2   H  0  1  N  N  N  62.630  30.027  34.524   3.973   0.868   1.633  H2   N0T  21  
N0T  H3   H3   H  0  1  N  N  N  61.249  28.709  35.989   5.238   0.619  -0.402  H3   N0T  22  
N0T  H4   H4   H  0  1  N  N  N  73.509  32.731  33.401  -8.797  -0.092  -1.692  H4   N0T  23  
N0T  H5   H5   H  0  1  N  N  N  72.063  32.610  32.342  -9.802  -0.195  -0.227  H5   N0T  24  
N0T  H6   H6   H  0  1  N  N  N  71.864  32.819  34.115  -8.904   1.299  -0.586  H6   N0T  25  
N0T  H7   H7   H  0  1  N  N  N  64.507  28.350  36.158   2.370   2.217  -0.596  H7   N0T  26  
N0T  H8   H8   H  0  1  N  N  N  64.872  29.944  35.413   2.125   2.546   1.136  H8   N0T  27  
N0T  H9   H9   H  0  1  N  N  N  66.057  29.218  34.206  -0.189  -1.298   0.651  H9   N0T  28  
N0T  H10  H10  H  0  1  N  N  N  65.972  29.014  32.424  -0.295   0.093   1.757  H10  N0T  29  
N0T  H11  H11  H  0  1  N  N  N  60.839  28.952  33.554   4.844  -1.568   0.531  H11  N0T  30  
N0T  H12  H12  H  0  1  N  N  N  62.597  26.486  33.374   2.039  -1.770  -0.562  H12  N0T  31  
N0T  H13  H13  H  0  1  N  N  N  64.815  26.909  32.837   1.100   0.125  -0.839  H13  N0T  32  
N0T  H15  H15  H  0  1  N  N  N  64.227  30.120  37.641   3.678   4.071   0.152  H15  N0T  33  
N0T  H16  H16  H  0  1  N  N  N  62.814  27.027  36.553   4.100   0.297  -2.477  H16  N0T  34  
N0T  H17  H17  H  0  1  N  N  N  59.413  27.389  34.549   4.308  -2.922  -1.363  H17  N0T  35  
N0T  H18  H18  H  0  1  N  N  N  61.242  26.886  31.536   2.955  -3.375   0.953  H18  N0T  36  
N0T  H19  H19  H  0  1  N  N  N  67.194  26.803  32.664  -1.431   1.411  -0.009  H19  N0T  37  
N0T  H20  H20  H  0  1  N  N  N  67.366  27.126  34.422  -1.325   0.020  -1.115  H20  N0T  38  
N0T  H21  H21  H  0  1  N  N  N  68.921  28.167  32.174  -2.680  -1.335   0.459  H21  N0T  39  
N0T  H22  H22  H  0  1  N  N  N  68.170  29.514  33.094  -2.786   0.055   1.565  H22  N0T  40  
N0T  H23  H23  H  0  1  N  N  N  69.343  29.020  35.015  -3.922   1.373  -0.202  H23  N0T  41  
N0T  H24  H24  H  0  1  N  N  N  69.711  27.345  34.482  -3.816  -0.017  -1.308  H24  N0T  42  
N0T  H25  H25  H  0  1  N  N  N  70.907  28.468  32.470  -5.170  -1.373   0.266  H25  N0T  43  
N0T  H26  H26  H  0  1  N  N  N  71.720  28.495  34.071  -5.277   0.018   1.372  H26  N0T  44  
N0T  H27  H27  H  0  1  N  N  N  70.599  30.713  32.428  -6.413   1.336  -0.394  H27  N0T  45  
N0T  H28  H28  H  0  1  N  N  N  70.425  30.840  34.212  -6.307  -0.055  -1.500  H28  N0T  46  
N0T  H29  H29  H  0  1  N  N  N  73.081  30.377  32.720  -7.767  -0.019   1.180  H29  N0T  47  
N0T  H30  H30  H  0  1  N  N  N  72.881  30.586  34.493  -7.661  -1.410   0.074  H30  N0T  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N0T  O12  C3   SING  N  N   1  
N0T  C3   C4   SING  N  N   2  
N0T  C3   C2   SING  N  N   3  
N0T  C17  C16  SING  N  N   4  
N0T  C17  C18  SING  N  N   5  
N0T  C7   C1   SING  N  N   6  
N0T  C15  C16  SING  N  N   7  
N0T  C15  N7   SING  N  N   8  
N0T  C20  C19  SING  N  N   9  
N0T  C20  C1   SING  N  N  10  
N0T  C4   N7   SING  N  N  11  
N0T  C4   C5   SING  N  N  12  
N0T  C19  C18  SING  N  N  13  
N0T  C2   O11  SING  N  N  14  
N0T  C2   C6   SING  N  N  15  
N0T  C5   C6   SING  N  N  16  
N0T  C5   C8   SING  N  N  17  
N0T  C6   O10  SING  N  N  18  
N0T  C8   O9   SING  N  N  19  
N0T  C4   H1   SING  N  N  20  
N0T  C5   H2   SING  N  N  21  
N0T  C6   H3   SING  N  N  22  
N0T  C7   H4   SING  N  N  23  
N0T  C7   H5   SING  N  N  24  
N0T  C7   H6   SING  N  N  25  
N0T  C8   H7   SING  N  N  26  
N0T  C8   H8   SING  N  N  27  
N0T  C15  H9   SING  N  N  28  
N0T  C15  H10  SING  N  N  29  
N0T  C2   H11  SING  N  N  30  
N0T  C3   H12  SING  N  N  31  
N0T  N7   H13  SING  N  N  32  
N0T  O9   H15  SING  N  N  33  
N0T  O10  H16  SING  N  N  34  
N0T  O11  H17  SING  N  N  35  
N0T  O12  H18  SING  N  N  36  
N0T  C16  H19  SING  N  N  37  
N0T  C16  H20  SING  N  N  38  
N0T  C17  H21  SING  N  N  39  
N0T  C17  H22  SING  N  N  40  
N0T  C18  H23  SING  N  N  41  
N0T  C18  H24  SING  N  N  42  
N0T  C19  H25  SING  N  N  43  
N0T  C19  H26  SING  N  N  44  
N0T  C20  H27  SING  N  N  45  
N0T  C20  H28  SING  N  N  46  
N0T  C1   H29  SING  N  N  47  
N0T  C1   H30  SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N0T  InChI             InChI                 1.03   "InChI=1S/C14H29NO4/c1-2-3-4-5-6-7-8-15-11-10(9-16)12(17)14(19)13(11)18/h10-19H,2-9H2,1H3/t10-,11+,12-,13-,14-/m0/s1"  
N0T  InChIKey          InChI                 1.03   UZTOTQLQFAGSAI-NDKCEZKHSA-N  
N0T  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCCN[C@H]1[C@H](O)[C@@H](O)[C@@H](O)[C@H]1CO"  
N0T  SMILES            CACTVS                3.385  "CCCCCCCCN[CH]1[CH](O)[CH](O)[CH](O)[CH]1CO"  
N0T  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCCCN[C@@H]1[C@@H]([C@@H]([C@@H]([C@H]1O)O)O)CO"  
N0T  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCCCNC1C(C(C(C1O)O)O)CO"  
#
_pdbx_chem_comp_identifier.comp_id          N0T
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N0T  "Create component"  2019-11-04  PDBE  
N0T  "Initial release"   2020-08-19  RCSB  
##
