data_M0T
# 
_chem_comp.id                                    M0T 
_chem_comp.name                                  "1-(3,4-dichlorobenzyl)-2-methyl-N-[(1R)-1-phenylpropyl]-1H-benzimidazole-5-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H23 Cl2 N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-05-14 
_chem_comp.pdbx_modified_date                    2012-06-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        452.376 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M0T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3MOT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M0T N1   N1   N  0 1 N N N -21.288 19.622 -13.089 4.099  -0.336 -0.050 N1   M0T 1  
M0T N3   N3   N  0 1 Y N N -23.507 16.474 -9.666  -1.318 -3.208 -0.701 N3   M0T 2  
M0T C4   C4   C  0 1 N N N -22.657 19.700 -13.275 3.287  -1.251 -0.617 C4   M0T 3  
M0T C5   C5   C  0 1 Y N N -23.441 19.144 -12.167 1.882  -1.366 -0.175 C5   M0T 4  
M0T C6   C6   C  0 1 Y N N -24.629 19.750 -11.836 1.396  -0.524 0.833  C6   M0T 5  
M0T C7   C7   C  0 1 Y N N -25.411 19.280 -10.804 0.100  -0.620 1.250  C7   M0T 6  
M0T C8   C8   C  0 1 Y N N -24.915 18.174 -10.155 -0.750 -1.559 0.676  C8   M0T 7  
M0T C17  C17  C  0 1 N N N -24.753 15.444 -7.757  -3.711 -3.575 -0.112 C17  M0T 8  
M0T C20  C20  C  0 1 Y N N -20.225 21.770 -13.574 5.995  1.170  -0.206 C20  M0T 9  
M0T C21  C21  C  0 1 Y N N -20.981 22.319 -12.563 6.805  1.812  -1.124 C21  M0T 10 
M0T C22  C22  C  0 1 Y N N -20.831 23.639 -12.197 7.266  3.089  -0.865 C22  M0T 11 
M0T C24  C24  C  0 1 Y N N -19.151 23.891 -13.867 6.106  3.083  1.229  C24  M0T 12 
M0T C1   C1   C  0 1 N N N -19.221 18.297 -14.727 5.920  -2.655 -0.114 C1   M0T 13 
M0T O1   O1   O  0 1 N N N -23.233 20.185 -14.238 3.711  -1.981 -1.492 O1   M0T 14 
M0T C2   C2   C  0 1 N N N -19.059 19.652 -14.077 6.350  -1.238 0.269  C2   M0T 15 
M0T N2   N2   N  0 1 Y N N -25.378 17.440 -9.106  -2.072 -1.895 0.871  N2   M0T 16 
M0T C3   C3   C  0 1 N N R -20.397 20.342 -13.975 5.492  -0.222 -0.489 C3   M0T 17 
M0T C9   C9   C  0 1 N N N -26.610 17.635 -8.395  -2.992 -1.279 1.830  C9   M0T 18 
M0T C16  C16  C  0 1 Y N N -24.517 16.427 -8.837  -2.366 -2.905 0.007  C16  M0T 19 
M0T C18  C18  C  0 1 Y N N -23.736 17.549 -10.481 -0.278 -2.412 -0.338 C18  M0T 20 
M0T C19  C19  C  0 1 Y N N -22.955 18.030 -11.517 1.046  -2.311 -0.762 C19  M0T 21 
M0T C23  C23  C  0 1 Y N N -19.915 24.427 -12.856 6.917  3.725  0.311  C23  M0T 22 
M0T C25  C25  C  0 1 Y N N -19.307 22.569 -14.222 5.651  1.803  0.973  C25  M0T 23 
M0T C10  C10  C  0 1 Y N N -26.630 18.886 -7.592  -3.694 -0.116 1.177  C10  M0T 24 
M0T C13  C13  C  0 1 Y N N -26.739 21.214 -6.130  -4.982 2.019  -0.020 C13  M0T 25 
M0T C15  C15  C  0 1 Y N N -25.709 19.103 -6.596  -4.889 -0.316 0.512  C15  M0T 26 
M0T CL1  CL1  CL 0 0 N N N -26.777 22.666 -5.196  -5.790 3.359  -0.772 CL1  M0T 27 
M0T CL2  CL2  CL 0 0 N N N -24.639 20.579 -4.630  -7.031 0.500  -0.929 CL2  M0T 28 
M0T C11  C11  C  0 1 Y N N -27.600 19.828 -7.846  -3.145 1.151  1.249  C11  M0T 29 
M0T C12  C12  C  0 1 Y N N -27.663 20.994 -7.122  -3.788 2.218  0.651  C12  M0T 30 
M0T C14  C14  C  0 1 Y N N -25.775 20.272 -5.877  -5.534 0.751  -0.088 C14  M0T 31 
M0T HN1  HN1  H  0 1 N N N -20.915 19.069 -12.344 3.759  0.249  0.645  HN1  M0T 32 
M0T H6   H6   H  0 1 N N N -24.957 20.613 -12.397 2.051  0.207  1.283  H6   M0T 33 
M0T H7   H7   H  0 1 N N N -26.345 19.746 -10.525 -0.266 0.033  2.028  H7   M0T 34 
M0T H17  H17  H  0 1 N N N -23.928 14.717 -7.736  -3.755 -4.424 0.570  H17  M0T 35 
M0T H17A H17A H  0 0 N N N -24.805 15.967 -6.791  -4.495 -2.862 0.145  H17A M0T 36 
M0T H17B H17B H  0 0 N N N -25.701 14.918 -7.941  -3.855 -3.921 -1.135 H17B M0T 37 
M0T H21  H21  H  0 1 N N N -21.704 21.704 -12.048 7.077  1.315  -2.044 H21  M0T 38 
M0T H22  H22  H  0 1 N N N -21.428 24.053 -11.398 7.899  3.590  -1.582 H22  M0T 39 
M0T H24  H24  H  0 1 N N N -18.429 24.507 -14.382 5.834  3.580  2.149  H24  M0T 40 
M0T H1   H1   H  0 1 N N N -18.240 17.803 -14.796 4.871  -2.799 0.146  H1   M0T 41 
M0T H1A  H1A  H  0 1 N N N -19.901 17.679 -14.122 6.051  -2.797 -1.187 H1A  M0T 42 
M0T H1B  H1B  H  0 1 N N N -19.640 18.422 -15.736 6.531  -3.378 0.426  H1B  M0T 43 
M0T H2   H2   H  0 1 N N N -18.640 19.523 -13.068 6.218  -1.096 1.342  H2   M0T 44 
M0T H2A  H2A  H  0 1 N N N -18.379 20.267 -14.685 7.398  -1.093 0.009  H2A  M0T 45 
M0T H3   H3   H  0 1 N N N -20.870 20.340 -14.968 5.554  -0.421 -1.559 H3   M0T 46 
M0T H9   H9   H  0 1 N N N -27.428 17.684 -9.129  -3.729 -2.014 2.151  H9   M0T 47 
M0T H9A  H9A  H  0 1 N N N -26.752 16.785 -7.712  -2.431 -0.925 2.695  H9A  M0T 48 
M0T H19  H19  H  0 1 N N N -22.023 17.562 -11.799 1.419  -2.960 -1.540 H19  M0T 49 
M0T H23  H23  H  0 1 N N N -19.796 25.464 -12.580 7.278  4.722  0.514  H23  M0T 50 
M0T H25  H25  H  0 1 N N N -18.704 22.154 -15.016 5.018  1.302  1.691  H25  M0T 51 
M0T H15  H15  H  0 1 N N N -24.947 18.368 -6.382  -5.318 -1.305 0.459  H15  M0T 52 
M0T H11  H11  H  0 1 N N N -28.324 19.648 -8.627  -2.214 1.307  1.773  H11  M0T 53 
M0T H12  H12  H  0 1 N N N -28.428 21.727 -7.330  -3.357 3.207  0.704  H12  M0T 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M0T N1  C4   SING N N 1  
M0T N1  C3   SING N N 2  
M0T N3  C16  DOUB Y N 3  
M0T N3  C18  SING Y N 4  
M0T C4  C5   SING N N 5  
M0T C4  O1   DOUB N N 6  
M0T C5  C6   DOUB Y N 7  
M0T C5  C19  SING Y N 8  
M0T C6  C7   SING Y N 9  
M0T C7  C8   DOUB Y N 10 
M0T C8  N2   SING Y N 11 
M0T C8  C18  SING Y N 12 
M0T C17 C16  SING N N 13 
M0T C20 C21  DOUB Y N 14 
M0T C20 C3   SING N N 15 
M0T C20 C25  SING Y N 16 
M0T C21 C22  SING Y N 17 
M0T C22 C23  DOUB Y N 18 
M0T C24 C23  SING Y N 19 
M0T C24 C25  DOUB Y N 20 
M0T C1  C2   SING N N 21 
M0T C2  C3   SING N N 22 
M0T N2  C9   SING N N 23 
M0T N2  C16  SING Y N 24 
M0T C9  C10  SING N N 25 
M0T C18 C19  DOUB Y N 26 
M0T C10 C15  DOUB Y N 27 
M0T C10 C11  SING Y N 28 
M0T C13 CL1  SING N N 29 
M0T C13 C12  SING Y N 30 
M0T C13 C14  DOUB Y N 31 
M0T C15 C14  SING Y N 32 
M0T CL2 C14  SING N N 33 
M0T C11 C12  DOUB Y N 34 
M0T N1  HN1  SING N N 35 
M0T C6  H6   SING N N 36 
M0T C7  H7   SING N N 37 
M0T C17 H17  SING N N 38 
M0T C17 H17A SING N N 39 
M0T C17 H17B SING N N 40 
M0T C21 H21  SING N N 41 
M0T C22 H22  SING N N 42 
M0T C24 H24  SING N N 43 
M0T C1  H1   SING N N 44 
M0T C1  H1A  SING N N 45 
M0T C1  H1B  SING N N 46 
M0T C2  H2   SING N N 47 
M0T C2  H2A  SING N N 48 
M0T C3  H3   SING N N 49 
M0T C9  H9   SING N N 50 
M0T C9  H9A  SING N N 51 
M0T C19 H19  SING N N 52 
M0T C23 H23  SING N N 53 
M0T C25 H25  SING N N 54 
M0T C15 H15  SING N N 55 
M0T C11 H11  SING N N 56 
M0T C12 H12  SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M0T SMILES           ACDLabs              12.01 "Clc1ccc(cc1Cl)Cn2c3ccc(cc3nc2C)C(=O)NC(c4ccccc4)CC"                                                                                                                 
M0T SMILES_CANONICAL CACTVS               3.370 "CC[C@@H](NC(=O)c1ccc2n(Cc3ccc(Cl)c(Cl)c3)c(C)nc2c1)c4ccccc4"                                                                                                        
M0T SMILES           CACTVS               3.370 "CC[CH](NC(=O)c1ccc2n(Cc3ccc(Cl)c(Cl)c3)c(C)nc2c1)c4ccccc4"                                                                                                          
M0T SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC[C@H](c1ccccc1)NC(=O)c2ccc3c(c2)nc(n3Cc4ccc(c(c4)Cl)Cl)C"                                                                                                         
M0T SMILES           "OpenEye OEToolkits" 1.7.0 "CCC(c1ccccc1)NC(=O)c2ccc3c(c2)nc(n3Cc4ccc(c(c4)Cl)Cl)C"                                                                                                             
M0T InChI            InChI                1.03  "InChI=1S/C25H23Cl2N3O/c1-3-22(18-7-5-4-6-8-18)29-25(31)19-10-12-24-23(14-19)28-16(2)30(24)15-17-9-11-20(26)21(27)13-17/h4-14,22H,3,15H2,1-2H3,(H,29,31)/t22-/m1/s1" 
M0T InChIKey         InChI                1.03  LDYDIGPGIRJQAU-JOCHJYFZSA-N                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
M0T "SYSTEMATIC NAME" ACDLabs              12.01 "1-(3,4-dichlorobenzyl)-2-methyl-N-[(1R)-1-phenylpropyl]-1H-benzimidazole-5-carboxamide"     
M0T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[(3,4-dichlorophenyl)methyl]-2-methyl-N-[(1R)-1-phenylpropyl]benzimidazole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M0T "Create component"     2010-05-14 RCSB 
M0T "Modify aromatic_flag" 2011-06-04 RCSB 
M0T "Modify descriptor"    2011-06-04 RCSB 
# 
