data_IZT
# 
_chem_comp.id                                    IZT 
_chem_comp.name                                  "N-(1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)-N~2~-(methanesulfonyl)-N~2~-naphthalen-1-ylglycinamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H22 N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-01 
_chem_comp.pdbx_modified_date                    2022-10-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        438.499 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IZT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5SH0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IZT C10 C1  C 0 1 N N N 94.544  -5.445  13.263 -0.054 0.046  -1.003 C10 IZT 1  
IZT C11 C2  C 0 1 Y N N 92.546  -7.361  14.373 -2.832 -0.250 -0.442 C11 IZT 2  
IZT C13 C3  C 0 1 Y N N 91.102  -6.536  16.664 -4.450 1.705  -1.581 C13 IZT 3  
IZT O14 O1  O 0 1 N N N 89.467  -10.981 15.469 -7.065 -0.552 1.660  O14 IZT 4  
IZT C18 C4  C 0 1 Y N N 92.811  -6.111  14.992 -2.334 0.577  -1.438 C18 IZT 5  
IZT C20 C5  C 0 1 Y N N 99.855  -5.782  12.345 4.734  1.738  0.957  C20 IZT 6  
IZT C21 C6  C 0 1 N N N 95.248  -6.244  9.426  3.799  -2.734 -1.071 C21 IZT 7  
IZT C22 C7  C 0 1 Y N N 92.044  -5.682  16.134 -3.145 1.553  -2.005 C22 IZT 8  
IZT C23 C8  C 0 1 N N N 91.637  -10.246 13.414 -4.471 -1.865 1.790  C23 IZT 9  
IZT C24 C9  C 0 1 N N N 89.019  -8.800  17.536 -7.370 1.616  -0.258 C24 IZT 10 
IZT C25 C10 C 0 1 Y N N 97.431  -7.201  11.934 2.124  0.922  1.472  C25 IZT 11 
IZT C26 C11 C 0 1 Y N N 98.729  -3.640  12.090 4.858  0.177  -0.909 C26 IZT 12 
IZT C27 C12 C 0 1 Y N N 98.594  -7.935  12.166 2.728  1.901  2.256  C27 IZT 13 
IZT C28 C13 C 0 1 Y N N 99.819  -7.239  12.378 4.004  2.308  2.014  C28 IZT 14 
IZT C1  C14 C 0 1 N N N 90.138  -9.900  15.448 -6.145 -0.209 0.941  C1  IZT 15 
IZT N2  N1  N 0 1 N N N 91.149  -9.517  14.502 -4.917 -0.761 0.936  N2  IZT 16 
IZT N3  N2  N 0 1 N N N 89.972  -8.851  16.396 -6.201 0.781  0.030  N3  IZT 17 
IZT S4  S1  S 0 1 N N N 95.872  -4.722  10.019 2.411  -2.233 -0.017 S4  IZT 18 
IZT C5  C15 C 0 1 Y N N 91.588  -8.214  14.903 -4.144 -0.103 -0.017 C5  IZT 19 
IZT N6  N3  N 0 1 N N N 96.273  -4.930  11.663 2.187  -0.629 -0.364 N6  IZT 20 
IZT C7  C16 C 0 1 Y N N 90.877  -7.820  16.052 -4.957 0.875  -0.593 C7  IZT 21 
IZT C8  C17 C 0 1 Y N N 97.471  -5.758  11.921 2.802  0.345  0.419  C8  IZT 22 
IZT C9  C18 C 0 1 N N N 95.489  -4.351  12.755 1.342  -0.235 -1.494 C9  IZT 23 
IZT C12 C19 C 0 1 Y N N 98.713  -5.054  12.116 4.129  0.745  0.147  C12 IZT 24 
IZT O15 O2  O 0 1 N N N 94.867  -3.587  9.891  1.208  -2.855 -0.446 O15 IZT 25 
IZT O16 O3  O 0 1 N N N 97.135  -4.378  9.234  2.795  -2.245 1.352  O16 IZT 26 
IZT N17 N4  N 0 1 N N N 93.752  -5.161  14.454 -1.011 0.428  -1.872 N17 IZT 27 
IZT O19 O4  O 0 1 N N N 94.475  -6.569  12.721 -0.319 -0.076 0.175  O19 IZT 28 
IZT C29 C20 C 0 1 Y N N 101.078 -5.078  12.544 6.053  2.139  0.683  C29 IZT 29 
IZT C30 C21 C 0 1 Y N N 99.940  -2.968  12.288 6.136  0.586  -1.141 C30 IZT 30 
IZT C31 C22 C 0 1 Y N N 101.109 -3.692  12.514 6.730  1.566  -0.349 C31 IZT 31 
IZT H34 H1  H 0 1 N N N 93.092  -7.649  13.487 -2.202 -1.008 -0.002 H34 IZT 32 
IZT H35 H2  H 0 1 N N N 90.534  -6.244  17.535 -5.077 2.464  -2.024 H35 IZT 33 
IZT H37 H3  H 0 1 N N N 94.979  -6.142  8.364  4.712  -2.247 -0.727 H37 IZT 34 
IZT H39 H4  H 0 1 N N N 96.017  -7.023  9.536  3.923  -3.816 -1.019 H39 IZT 35 
IZT H38 H5  H 0 1 N N N 94.356  -6.525  10.005 3.597  -2.441 -2.102 H38 IZT 36 
IZT H40 H6  H 0 1 N N N 92.205  -4.706  16.568 -2.753 2.194  -2.781 H40 IZT 37 
IZT H41 H7  H 0 1 N N N 92.409  -9.659  12.895 -5.290 -2.178 2.437  H41 IZT 38 
IZT H43 H8  H 0 1 N N N 92.073  -11.190 13.772 -4.160 -2.703 1.166  H43 IZT 39 
IZT H42 H9  H 0 1 N N N 90.813  -10.463 12.719 -3.630 -1.535 2.400  H42 IZT 40 
IZT H45 H10 H 0 1 N N N 89.143  -7.850  18.076 -8.199 1.314  0.382  H45 IZT 41 
IZT H44 H11 H 0 1 N N N 87.989  -8.874  17.156 -7.126 2.661  -0.069 H44 IZT 42 
IZT H46 H12 H 0 1 N N N 89.219  -9.639  18.219 -7.656 1.493  -1.303 H46 IZT 43 
IZT H47 H13 H 0 1 N N N 96.496  -7.714  11.763 1.111  0.617  1.686  H47 IZT 44 
IZT H48 H14 H 0 1 N N N 97.818  -3.086  11.919 4.410  -0.584 -1.530 H48 IZT 45 
IZT H49 H15 H 0 1 N N N 98.566  -9.014  12.185 2.177  2.338  3.076  H49 IZT 46 
IZT H50 H16 H 0 1 N N N 100.726 -7.794  12.564 4.456  3.068  2.634  H50 IZT 47 
IZT H32 H17 H 0 1 N N N 96.156  -4.023  13.566 1.314  -1.043 -2.225 H32 IZT 48 
IZT H33 H18 H 0 1 N N N 94.908  -3.492  12.388 1.752  0.662  -1.958 H33 IZT 49 
IZT H36 H19 H 0 1 N N N 93.865  -4.279  14.912 -0.782 0.600  -2.799 H36 IZT 50 
IZT H51 H20 H 0 1 N N N 101.990 -5.629  12.720 6.526  2.898  1.288  H51 IZT 51 
IZT H52 H21 H 0 1 N N N 99.969  -1.889  12.266 6.697  0.143  -1.951 H52 IZT 52 
IZT H53 H22 H 0 1 N N N 102.043 -3.172  12.666 7.744  1.877  -0.558 H53 IZT 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IZT C1  N2  SING N N 1  
IZT C1  N3  SING N N 2  
IZT N2  C5  SING N N 3  
IZT S4  N6  SING N N 4  
IZT N3  C7  SING N N 5  
IZT C5  C7  DOUB Y N 6  
IZT N6  C8  SING N N 7  
IZT N6  C9  SING N N 8  
IZT C9  C10 SING N N 9  
IZT C5  C11 SING Y N 10 
IZT C8  C12 DOUB Y N 11 
IZT C7  C13 SING Y N 12 
IZT C1  O14 DOUB N N 13 
IZT S4  O15 DOUB N N 14 
IZT S4  O16 DOUB N N 15 
IZT C10 N17 SING N N 16 
IZT C11 C18 DOUB Y N 17 
IZT N17 C18 SING N N 18 
IZT C10 O19 DOUB N N 19 
IZT C12 C20 SING Y N 20 
IZT S4  C21 SING N N 21 
IZT C13 C22 DOUB Y N 22 
IZT C18 C22 SING Y N 23 
IZT N2  C23 SING N N 24 
IZT N3  C24 SING N N 25 
IZT C8  C25 SING Y N 26 
IZT C12 C26 SING Y N 27 
IZT C25 C27 DOUB Y N 28 
IZT C20 C28 DOUB Y N 29 
IZT C27 C28 SING Y N 30 
IZT C20 C29 SING Y N 31 
IZT C26 C30 DOUB Y N 32 
IZT C29 C31 DOUB Y N 33 
IZT C30 C31 SING Y N 34 
IZT C11 H34 SING N N 35 
IZT C13 H35 SING N N 36 
IZT C21 H37 SING N N 37 
IZT C21 H39 SING N N 38 
IZT C21 H38 SING N N 39 
IZT C22 H40 SING N N 40 
IZT C23 H41 SING N N 41 
IZT C23 H43 SING N N 42 
IZT C23 H42 SING N N 43 
IZT C24 H45 SING N N 44 
IZT C24 H44 SING N N 45 
IZT C24 H46 SING N N 46 
IZT C25 H47 SING N N 47 
IZT C26 H48 SING N N 48 
IZT C27 H49 SING N N 49 
IZT C28 H50 SING N N 50 
IZT C9  H32 SING N N 51 
IZT C9  H33 SING N N 52 
IZT N17 H36 SING N N 53 
IZT C29 H51 SING N N 54 
IZT C30 H52 SING N N 55 
IZT C31 H53 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IZT SMILES           ACDLabs              12.01 "CS(=O)(=O)N(CC(=O)Nc1ccc2c(c1)N(C)C(=O)N2C)c1cccc2ccccc21"                                                                                         
IZT InChI            InChI                1.03  "InChI=1S/C22H22N4O4S/c1-24-19-12-11-16(13-20(19)25(2)22(24)28)23-21(27)14-26(31(3,29)30)18-10-6-8-15-7-4-5-9-17(15)18/h4-13H,14H2,1-3H3,(H,23,27)" 
IZT InChIKey         InChI                1.03  OQWBGGOCJAGEOY-UHFFFAOYSA-N                                                                                                                         
IZT SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)N(C)c2cc(NC(=O)CN(c3cccc4ccccc34)[S](C)(=O)=O)ccc12"                                                                                       
IZT SMILES           CACTVS               3.385 "CN1C(=O)N(C)c2cc(NC(=O)CN(c3cccc4ccccc34)[S](C)(=O)=O)ccc12"                                                                                       
IZT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2ccc(cc2N(C1=O)C)NC(=O)CN(c3cccc4c3cccc4)S(=O)(=O)C"                                                                                           
IZT SMILES           "OpenEye OEToolkits" 2.0.7 "CN1c2ccc(cc2N(C1=O)C)NC(=O)CN(c3cccc4c3cccc4)S(=O)(=O)C"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
IZT "SYSTEMATIC NAME" ACDLabs              12.01 "N-(1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)-N~2~-(methanesulfonyl)-N~2~-naphthalen-1-ylglycinamide" 
IZT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(1,3-dimethyl-2-oxidanylidene-benzimidazol-5-yl)-2-[methylsulfonyl(naphthalen-1-yl)amino]ethanamide"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IZT "Create component" 2022-02-01 RCSB 
IZT "Initial release"  2022-10-12 RCSB 
# 
