data_I0T
# 
_chem_comp.id                                    I0T 
_chem_comp.name                                  "N-[[1-[[2-[3,5-bis(chloranyl)phenyl]-6-[6-[4-(2-methoxyethyl)piperazin-4-ium-1-yl]pyridin-3-yl]oxy-pyridin-4-yl]methyl]piperidin-1-ium-4-yl]methyl]ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H42 Cl2 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2022-02-08 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        629.620 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I0T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QY0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I0T CAA C1  C  0 1 N N N 55.101 -29.782 5.075   12.249  -1.281 -0.655 CAA I0T 1  
I0T CAB C2  C  0 1 N N N 54.532 -29.275 3.752   10.924  -0.949 -1.291 CAB I0T 2  
I0T CAE C3  C  0 1 N N N 53.457 -29.847 1.646   8.533   -0.503 -1.143 CAE I0T 3  
I0T CAF C4  C  0 1 N N N 52.736 -31.050 1.056   7.455   -0.421 -0.060 CAF I0T 4  
I0T CAG C5  C  0 1 N N N 51.493 -31.394 1.867   6.134   0.038  -0.687 CAG I0T 5  
I0T CAH C6  C  0 1 N N N 50.751 -32.564 1.202   5.042   0.041  0.385  CAH I0T 6  
I0T CAJ C7  C  0 1 N N N 51.532 -31.894 -1.008  6.122   -1.732 1.595  CAJ I0T 7  
I0T CAK C8  C  0 1 N N N 52.299 -30.722 -0.392  7.256   -1.803 0.570  CAK I0T 8  
I0T CAL C9  C  0 1 N N N 49.683 -33.501 -0.743  3.780   -1.321 1.901  CAL I0T 9  
I0T CAM C10 C  0 1 Y N N 49.039 -33.250 -2.114  2.486   -1.011 1.195  CAM I0T 10 
I0T CAN C11 C  0 1 Y N N 49.696 -33.631 -3.275  1.710   -2.027 0.663  CAN I0T 11 
I0T CAO C12 C  0 1 Y N N 49.068 -33.386 -4.492  0.521   -1.708 0.017  CAO I0T 12 
I0T CAQ C13 C  0 1 Y N N 47.211 -32.413 -3.472  0.843   0.547  0.411  CAQ I0T 13 
I0T CAR C14 C  0 1 Y N N 47.786 -32.638 -2.222  2.043   0.296  1.070  CAR I0T 14 
I0T CAS C15 C  0 1 Y N N 45.971 -31.765 -3.634  0.360   1.942  0.270  CAS I0T 15 
I0T CAT C16 C  0 1 Y N N 45.161 -32.003 -4.738  1.204   3.009  0.573  CAT I0T 16 
I0T CAU C17 C  0 1 Y N N 43.957 -31.321 -4.888  0.749   4.306  0.440  CAU I0T 17 
I0T CAW C18 C  0 1 Y N N 43.560 -30.376 -3.954  -0.543  4.548  0.008  CAW I0T 18 
I0T CAX C19 C  0 1 Y N N 44.377 -30.102 -2.867  -1.386  3.492  -0.295 CAX I0T 19 
I0T CAZ C20 C  0 1 Y N N 45.578 -30.794 -2.714  -0.938  2.191  -0.171 CAZ I0T 20 
I0T CBB C21 C  0 1 Y N N 49.112 -33.959 -6.802  -1.584  -2.662 -0.272 CBB I0T 21 
I0T CBC C22 C  0 1 Y N N 49.764 -33.435 -7.903  -2.431  -3.580 -0.887 CBC I0T 22 
I0T CBD C23 C  0 1 Y N N 49.256 -33.644 -9.156  -3.787  -3.507 -0.620 CBD I0T 23 
I0T CBE C24 C  0 1 Y N N 48.104 -34.393 -9.335  -4.254  -2.526 0.248  CBE I0T 24 
I0T CBG C25 C  0 1 Y N N 47.967 -34.726 -6.970  -2.120  -1.716 0.586  CBG I0T 25 
I0T CBI C26 C  0 1 N N N 48.328 -34.050 -11.736 -5.899  -1.345 1.459  CBI I0T 26 
I0T CBJ C27 C  0 1 N N N 48.234 -34.925 -12.961 -7.395  -1.326 1.781  CBJ I0T 27 
I0T CBL C28 C  0 1 N N N 46.909 -36.297 -14.386 -7.767  0.118  -0.098 CBL I0T 28 
I0T CBM C29 C  0 1 N N N 45.481 -36.351 -14.916 -8.651  0.368  -1.321 CBM I0T 29 
I0T CBO C30 C  0 1 N N N 44.045 -37.958 -15.685 -10.916 0.805  -1.973 CBO I0T 30 
I0T CBP C31 C  0 1 N N N 46.649 -36.373 -12.009 -7.888  -2.262 -0.373 CBP I0T 31 
I0T CBQ C32 C  0 1 N N N 46.500 -35.535 -10.766 -6.396  -2.289 -0.713 CBQ I0T 32 
I0T NAD N1  N  0 1 N N N 54.018 -30.212 2.954   9.821   -0.826 -0.525 NAD I0T 33 
I0T NAI N2  N  1 1 N N N 50.354 -32.279 -0.201  4.882   -1.313 0.930  NAI I0T 34 
I0T NAP N3  N  0 1 Y N N 47.879 -32.794 -4.569  0.127   -0.451 -0.092 NAP I0T 35 
I0T NBF N4  N  0 1 Y N N 47.478 -34.921 -8.266  -3.419  -1.671 0.814  NBF I0T 36 
I0T NBH N5  N  0 1 N N N 47.640 -34.623 -10.580 -5.617  -2.443 0.523  NBH I0T 37 
I0T NBK N6  N  1 1 N N N 46.901 -35.505 -13.162 -8.161  -1.145 0.541  NBK I0T 38 
I0T OAC O1  O  0 1 N N N 54.566 -28.089 3.465   10.849  -0.793 -2.491 OAC I0T 39 
I0T OBA O2  O  0 1 N N N 49.720 -33.736 -5.622  -0.245  -2.698 -0.507 OBA I0T 40 
I0T OBN O3  O  0 1 N N N 44.910 -37.622 -14.594 -10.003 0.562  -0.901 OBN I0T 41 
I0T CL1 CL1 CL 0 0 N N N 42.936 -31.632 -6.239  1.800   5.636  0.818  CL1 I0T 42 
I0T CL2 CL2 CL 0 0 N N N 43.915 -28.889 -1.708  -3.005  3.804  -0.837 CL2 I0T 43 
I0T HAC H1  H  0 1 N N N 55.504 -28.935 5.650   12.374  -2.364 -0.620 HAC I0T 44 
I0T HAA H2  H  0 1 N N N 54.303 -30.271 5.654   13.054  -0.842 -1.243 HAA I0T 45 
I0T HAB H3  H  0 1 N N N 55.905 -30.505 4.875   12.277  -0.879 0.358  HAB I0T 46 
I0T HAF H4  H  0 1 N N N 54.269 -29.538 0.971   8.269   -1.280 -1.860 HAF I0T 47 
I0T HAE H5  H  0 1 N N N 52.746 -29.017 1.770   8.606   0.456  -1.656 HAE I0T 48 
I0T HAG H6  H  0 1 N N N 53.416 -31.915 1.041   7.761   0.290  0.706  HAG I0T 49 
I0T HAH H7  H  0 1 N N N 51.789 -31.681 2.887   6.253   1.044  -1.089 HAH I0T 50 
I0T HAI H8  H  0 1 N N N 50.830 -30.517 1.910   5.856   -0.645 -1.490 HAI I0T 51 
I0T HAK H9  H  0 1 N N N 49.844 -32.781 1.786   5.322   0.724  1.187  HAK I0T 52 
I0T HAJ H10 H  0 1 N N N 51.410 -33.445 1.208   4.101   0.367  -0.058 HAJ I0T 53 
I0T HAM H11 H  0 1 N N N 51.193 -31.605 -2.014  5.978   -2.713 2.046  HAM I0T 54 
I0T HAL H12 H  0 1 N N N 52.208 -32.759 -1.083  6.379   -1.010 2.371  HAL I0T 55 
I0T HAO H13 H  0 1 N N N 53.192 -30.516 -1.000  7.000   -2.524 -0.206 HAO I0T 56 
I0T HAN H14 H  0 1 N N N 51.651 -29.833 -0.380  8.176   -2.112 1.066  HAN I0T 57 
I0T HAQ H15 H  0 1 N N N 48.901 -33.818 -0.037  3.966   -0.568 2.668  HAQ I0T 58 
I0T HAP H16 H  0 1 N N N 50.432 -34.301 -0.844  3.714   -2.304 2.367  HAP I0T 59 
I0T HAR H17 H  0 1 N N N 50.666 -34.104 -3.235  2.025   -3.056 0.748  HAR I0T 60 
I0T HAS H18 H  0 1 N N N 47.259 -32.337 -1.329  2.623   1.111  1.478  HAS I0T 61 
I0T HAT H19 H  0 1 N N N 45.468 -32.721 -5.484  2.212   2.821  0.912  HAT I0T 62 
I0T HAW H20 H  0 1 N N N 42.621 -29.857 -4.072  -0.896  5.564  -0.094 HAW I0T 63 
I0T HAZ H21 H  0 1 N N N 46.214 -30.574 -1.869  -1.595  1.368  -0.412 HAZ I0T 64 
I0T HBC H22 H  0 1 N N N 50.671 -32.863 -7.774  -2.040  -4.331 -1.557 HBC I0T 65 
I0T HBD H23 H  0 1 N N N 49.758 -33.221 -10.014 -4.473  -4.202 -1.080 HBD I0T 66 
I0T HBG H24 H  0 1 N N N 47.465 -35.162 -6.119  -1.468  -1.004 1.070  HBG I0T 67 
I0T HBJ H25 H  0 1 N N N 49.389 -33.913 -11.482 -5.613  -0.397 1.003  HBJ I0T 68 
I0T HBI H26 H  0 1 N N N 47.877 -33.073 -11.966 -5.331  -1.494 2.377  HBI I0T 69 
I0T HBL H27 H  0 1 N N N 48.960 -35.745 -12.860 -7.678  -2.269 2.249  HBL I0T 70 
I0T HBK H28 H  0 1 N N N 48.487 -34.318 -13.843 -7.609  -0.503 2.464  HBK I0T 71 
I0T HBN H29 H  0 1 N N N 47.267 -37.315 -14.171 -6.724  0.058  -0.409 HBN I0T 72 
I0T HBM H30 H  0 1 N N N 47.567 -35.827 -15.131 -7.888  0.937  0.611  HBM I0T 73 
I0T HBP H31 H  0 1 N N N 45.488 -36.216 -16.008 -8.302  1.257  -1.846 HBP I0T 74 
I0T HBO H32 H  0 1 N N N 44.885 -35.551 -14.452 -8.599  -0.492 -1.989 HBO I0T 75 
I0T HBR H33 H  0 1 N N N 43.574 -38.933 -15.493 -11.920 0.942  -1.571 HBR I0T 76 
I0T HBS H34 H  0 1 N N N 43.266 -37.188 -15.786 -10.614 1.704  -2.511 HBS I0T 77 
I0T HBQ H35 H  0 1 N N N 44.631 -38.011 -16.614 -10.911 -0.046 -2.654 HBQ I0T 78 
I0T HBT H36 H  0 1 N N N 45.725 -36.945 -12.177 -8.467  -2.133 -1.287 HBT I0T 79 
I0T HBU H37 H  0 1 N N N 47.493 -37.068 -11.883 -8.168  -3.200 0.106  HBU I0T 80 
I0T HBW H38 H  0 1 N N N 45.578 -34.940 -10.846 -6.190  -3.127 -1.380 HBW I0T 81 
I0T HBV H39 H  0 1 N N N 46.432 -36.202 -9.894  -6.118  -1.357 -1.204 HBV I0T 82 
I0T HAD H40 H  0 1 N N N 54.014 -31.168 3.247   9.881   -0.951 0.435  HAD I0T 83 
I0T HBX H41 H  0 1 N N N 49.698 -31.524 -0.204  4.672   -1.953 0.179  HBX I0T 84 
I0T HBY H42 H  0 1 N N N 46.210 -34.784 -13.214 -9.147  -1.120 0.756  HBY I0T 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I0T CBO OBN SING N N 1  
I0T CBM OBN SING N N 2  
I0T CBM CBL SING N N 3  
I0T CBL NBK SING N N 4  
I0T NBK CBJ SING N N 5  
I0T NBK CBP SING N N 6  
I0T CBJ CBI SING N N 7  
I0T CBP CBQ SING N N 8  
I0T CBI NBH SING N N 9  
I0T CBQ NBH SING N N 10 
I0T NBH CBE SING N N 11 
I0T CBE CBD DOUB Y N 12 
I0T CBE NBF SING Y N 13 
I0T CBD CBC SING Y N 14 
I0T NBF CBG DOUB Y N 15 
I0T CBC CBB DOUB Y N 16 
I0T CBG CBB SING Y N 17 
I0T CBB OBA SING N N 18 
I0T CL1 CAU SING N N 19 
I0T OBA CAO SING N N 20 
I0T CAU CAT DOUB Y N 21 
I0T CAU CAW SING Y N 22 
I0T CAT CAS SING Y N 23 
I0T NAP CAO DOUB Y N 24 
I0T NAP CAQ SING Y N 25 
I0T CAO CAN SING Y N 26 
I0T CAW CAX DOUB Y N 27 
I0T CAS CAQ SING N N 28 
I0T CAS CAZ DOUB Y N 29 
I0T CAQ CAR DOUB Y N 30 
I0T CAN CAM DOUB Y N 31 
I0T CAX CAZ SING Y N 32 
I0T CAX CL2 SING N N 33 
I0T CAR CAM SING Y N 34 
I0T CAM CAL SING N N 35 
I0T CAJ CAK SING N N 36 
I0T CAJ NAI SING N N 37 
I0T CAL NAI SING N N 38 
I0T CAK CAF SING N N 39 
I0T NAI CAH SING N N 40 
I0T CAF CAE SING N N 41 
I0T CAF CAG SING N N 42 
I0T CAH CAG SING N N 43 
I0T CAE NAD SING N N 44 
I0T NAD CAB SING N N 45 
I0T OAC CAB DOUB N N 46 
I0T CAB CAA SING N N 47 
I0T CAA HAC SING N N 48 
I0T CAA HAA SING N N 49 
I0T CAA HAB SING N N 50 
I0T CAE HAF SING N N 51 
I0T CAE HAE SING N N 52 
I0T CAF HAG SING N N 53 
I0T CAG HAH SING N N 54 
I0T CAG HAI SING N N 55 
I0T CAH HAK SING N N 56 
I0T CAH HAJ SING N N 57 
I0T CAJ HAM SING N N 58 
I0T CAJ HAL SING N N 59 
I0T CAK HAO SING N N 60 
I0T CAK HAN SING N N 61 
I0T CAL HAQ SING N N 62 
I0T CAL HAP SING N N 63 
I0T CAN HAR SING N N 64 
I0T CAR HAS SING N N 65 
I0T CAT HAT SING N N 66 
I0T CAW HAW SING N N 67 
I0T CAZ HAZ SING N N 68 
I0T CBC HBC SING N N 69 
I0T CBD HBD SING N N 70 
I0T CBG HBG SING N N 71 
I0T CBI HBJ SING N N 72 
I0T CBI HBI SING N N 73 
I0T CBJ HBL SING N N 74 
I0T CBJ HBK SING N N 75 
I0T CBL HBN SING N N 76 
I0T CBL HBM SING N N 77 
I0T CBM HBP SING N N 78 
I0T CBM HBO SING N N 79 
I0T CBO HBR SING N N 80 
I0T CBO HBS SING N N 81 
I0T CBO HBQ SING N N 82 
I0T CBP HBT SING N N 83 
I0T CBP HBU SING N N 84 
I0T CBQ HBW SING N N 85 
I0T CBQ HBV SING N N 86 
I0T NAD HAD SING N N 87 
I0T NAI HBX SING N N 88 
I0T NBK HBY SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I0T InChI            InChI                1.06  "InChI=1S/C32H40Cl2N6O3/c1-23(41)35-20-24-5-7-39(8-6-24)22-25-15-30(26-17-27(33)19-28(34)18-26)37-32(16-25)43-29-3-4-31(36-21-29)40-11-9-38(10-12-40)13-14-42-2/h3-4,15-19,21,24H,5-14,20,22H2,1-2H3,(H,35,41)/p+2" 
I0T InChIKey         InChI                1.06  AUPHEGBHBGKBKL-UHFFFAOYSA-P                                                                                                                                                                                         
I0T SMILES_CANONICAL CACTVS               3.385 "COCC[NH+]1CCN(CC1)c2ccc(Oc3cc(C[NH+]4CCC(CC4)CNC(C)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2"                                                                                                                                  
I0T SMILES           CACTVS               3.385 "COCC[NH+]1CCN(CC1)c2ccc(Oc3cc(C[NH+]4CCC(CC4)CNC(C)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2"                                                                                                                                  
I0T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)NCC1CC[NH+](CC1)Cc2cc(nc(c2)Oc3ccc(nc3)N4CC[NH+](CC4)CCOC)c5cc(cc(c5)Cl)Cl"                                                                                                                                  
I0T SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)NCC1CC[NH+](CC1)Cc2cc(nc(c2)Oc3ccc(nc3)N4CC[NH+](CC4)CCOC)c5cc(cc(c5)Cl)Cl"                                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           I0T 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[[1-[[2-[3,5-bis(chloranyl)phenyl]-6-[6-[4-(2-methoxyethyl)piperazin-4-ium-1-yl]pyridin-3-yl]oxy-pyridin-4-yl]methyl]piperidin-1-ium-4-yl]methyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I0T "Create component"   2022-02-08 PDBE 
I0T "Other modification" 2022-02-08 PDBE 
I0T "Modify charge"      2022-04-11 PDBE 
I0T "Initial release"    2022-04-20 RCSB 
I0T "Modify descriptor"  2022-08-22 RCSB 
# 
