data_DGT
#

_chem_comp.id                                   DGT
_chem_comp.name                                 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H16 N5 O13 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2011-06-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       507.181
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DGT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1HK8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DGT  PG      PG      P  0  1  N  N  N  32.266  78.871  76.218  -6.722   1.739  -0.798  P1   DGT   1  
DGT  O1G     O1G     O  0  1  N  N  N  31.153  79.985  76.366  -7.321   0.703  -1.876  O1   DGT   2  
DGT  O2G     O2G     O  0  1  N  N  N  33.145  78.551  77.503  -6.586   3.195  -1.471  O2   DGT   3  
DGT  O3G     O3G     O  0  1  N  N  N  31.600  77.506  75.758  -7.629   1.817   0.368  O3   DGT   4  
DGT  O3B     O3B     O  0  1  N  N  N  33.211  79.424  75.063  -5.271   1.232  -0.317  O4   DGT   5  
DGT  PB      PB      P  0  1  N  N  S  34.610  78.768  74.667  -4.764   0.060   0.662  P2   DGT   6  
DGT  O1B     O1B     O  0  1  N  N  N  34.597  77.173  74.731  -5.022   0.489   2.192  O5   DGT   7  
DGT  O2B     O2B     O  0  1  N  N  N  34.904  79.361  73.231  -5.508  -1.185   0.368  O6   DGT   8  
DGT  O3A     O3A     O  0  1  N  N  N  35.682  79.283  75.741  -3.190  -0.189   0.432  O7   DGT   9  
DGT  PA      PA      P  0  1  N  N  R  36.293  80.771  75.717  -2.192  -1.411   0.751  P3   DGT  10  
DGT  O1A     O1A     O  0  1  N  N  N  36.826  81.090  77.182  -1.875  -1.448   2.329  O8   DGT  11  
DGT  O2A     O2A     O  0  1  N  N  N  37.451  80.843  74.624  -2.828  -2.685   0.346  O9   DGT  12  
DGT  "O5'"   "O5'"   O  0  1  N  N  N  35.068  81.728  75.281  -0.821  -1.212  -0.068  O10  DGT  13  
DGT  "C5'"   "C5'"   C  0  1  N  N  N  34.201  82.274  76.270   0.228  -2.183  -0.079  C1   DGT  14  
DGT  "C4'"   "C4'"   C  0  1  N  N  R  33.306  83.380  75.714   1.380  -1.680  -0.950  C2   DGT  15  
DGT  "O4'"   "O4'"   O  0  1  N  N  N  34.029  84.594  75.478   2.030  -0.550  -0.330  O11  DGT  16  
DGT  "C3'"   "C3'"   C  0  1  N  N  S  32.567  83.020  74.433   2.503  -2.744  -1.038  C3   DGT  17  
DGT  "O3'"   "O3'"   O  0  1  N  N  N  31.175  82.994  74.711   2.243  -3.674  -2.091  O12  DGT  18  
DGT  "C2'"   "C2'"   C  0  1  N  N  N  32.894  84.114  73.428   3.746  -1.879  -1.358  C4   DGT  19  
DGT  "C1'"   "C1'"   C  0  1  N  N  R  33.803  85.105  74.157   3.348  -0.460  -0.898  C5   DGT  20  
DGT  N9      N9      N  0  1  Y  N  N  35.124  85.396  73.513   4.294   0.020   0.112  N1   DGT  21  
DGT  C8      C8      C  0  1  Y  N  N  35.944  84.585  72.778   4.145  -0.070   1.466  C6   DGT  22  
DGT  N7      N7      N  0  1  Y  N  N  37.088  85.251  72.377   5.176   0.458   2.059  N2   DGT  23  
DGT  C5      C5      C  0  1  Y  N  N  37.028  86.519  72.862   6.045   0.916   1.125  C7   DGT  24  
DGT  C6      C6      C  0  1  N  N  N  37.806  87.806  72.885   7.301   1.565   1.183  C8   DGT  25  
DGT  O6      O6      O  0  1  N  N  N  38.913  87.924  72.312   7.822   1.824   2.254  O13  DGT  26  
DGT  N1      N1      N  0  1  N  N  N  37.324  88.886  73.533   7.908   1.891   0.021  N3   DGT  27  
DGT  C2      C2      C  0  1  N  N  N  36.144  88.892  74.184   7.317   1.597  -1.172  C9   DGT  28  
DGT  N2      N2      N  0  1  N  N  N  35.763  90.040  74.793   7.957   1.939  -2.336  N4   DGT  29  
DGT  N3      N3      N  0  1  N  N  N  35.343  87.792  74.245   6.151   0.994  -1.238  N5   DGT  30  
DGT  C4      C4      C  0  1  Y  N  N  35.765  86.571  73.584   5.492   0.636  -0.130  C10  DGT  31  
DGT  HO1G    HO1G    H  0  0  N  N  N  30.930  80.090  77.283  -6.777   0.602  -2.669  H1   DGT  32  
DGT  HO2G    HO2G    H  0  0  N  N  N  34.060  78.487  77.254  -7.424   3.563  -1.785  H2   DGT  33  
DGT  HO1B    HO1B    H  0  0  N  N  N  34.594  76.820  73.849  -4.564   1.299   2.456  H3   DGT  34  
DGT  HO1A    HO1A    H  0  0  N  N  N  37.774  81.154  77.168  -1.457  -0.644   2.665  H4   DGT  35  
DGT  "H5'"   "H5'"   H  0  1  N  N  N  33.560  81.468  76.656   0.585  -2.344   0.939  H5   DGT  36  
DGT  "H5'A"  "H5'A"  H  0  0  N  N  N  34.827  82.713  77.061  -0.151  -3.122  -0.483  H6   DGT  37  
DGT  "H4'"   "H4'"   H  0  1  N  N  N  32.558  83.520  76.508   1.021  -1.418  -1.945  H7   DGT  38  
DGT  "H3'"   "H3'"   H  0  1  N  N  N  32.861  82.036  74.038   2.624  -3.262  -0.086  H8   DGT  39  
DGT  "HO3'"  "HO3'"  H  0  0  N  N  N  31.039  82.988  75.651   2.918  -4.360  -2.186  H9   DGT  40  
DGT  "H2'"   "H2'"   H  0  1  N  N  N  33.406  83.692  72.551   4.613  -2.234  -0.800  H10  DGT  41  
DGT  "H2'A"  "H2'A"  H  0  0  N  N  N  31.981  84.605  73.061   3.951  -1.888  -2.429  H11  DGT  42  
DGT  "H1'"   "H1'"   H  0  1  N  N  N  33.273  86.069  74.140   3.338   0.218  -1.752  H12  DGT  43  
DGT  H8      H8      H  0  1  N  N  N  35.726  83.554  72.541   3.298  -0.513   1.969  H13  DGT  44  
DGT  HN2     HN2     H  0  1  N  N  N  36.453  90.751  74.659   8.818   2.385  -2.303  H14  DGT  45  
DGT  HN2A    HN2A    H  0  0  N  N  N  34.912  90.160  75.304   7.549   1.737  -3.192  H15  DGT  46  
DGT  H16     H16     H  0  1  N  N  N  37.869  89.724  73.530   8.770   2.336   0.035  H16  DGT  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DGT  PG     O1G     SING  N  N   1  
DGT  PG     O2G     SING  N  N   2  
DGT  O1G    HO1G    SING  N  N   3  
DGT  O2G    HO2G    SING  N  N   4  
DGT  O3G    PG      DOUB  N  N   5  
DGT  O3B    PG      SING  N  N   6  
DGT  PB     O3B     SING  N  N   7  
DGT  PB     O1B     SING  N  N   8  
DGT  PB     O3A     SING  N  N   9  
DGT  O1B    HO1B    SING  N  N  10  
DGT  O2B    PB      DOUB  N  N  11  
DGT  PA     O3A     SING  N  N  12  
DGT  PA     O1A     SING  N  N  13  
DGT  O1A    HO1A    SING  N  N  14  
DGT  O2A    PA      DOUB  N  N  15  
DGT  "O5'"  PA      SING  N  N  16  
DGT  "O5'"  "C5'"   SING  N  N  17  
DGT  "C5'"  "H5'"   SING  N  N  18  
DGT  "C5'"  "H5'A"  SING  N  N  19  
DGT  "C4'"  "C5'"   SING  N  N  20  
DGT  "C4'"  "H4'"   SING  N  N  21  
DGT  "O4'"  "C4'"   SING  N  N  22  
DGT  "C3'"  "C4'"   SING  N  N  23  
DGT  "C3'"  "O3'"   SING  N  N  24  
DGT  "C3'"  "H3'"   SING  N  N  25  
DGT  "O3'"  "HO3'"  SING  N  N  26  
DGT  "C2'"  "C3'"   SING  N  N  27  
DGT  "C2'"  "C1'"   SING  N  N  28  
DGT  "C2'"  "H2'"   SING  N  N  29  
DGT  "C2'"  "H2'A"  SING  N  N  30  
DGT  "C1'"  "O4'"   SING  N  N  31  
DGT  "C1'"  "H1'"   SING  N  N  32  
DGT  N9     "C1'"   SING  N  N  33  
DGT  N9     C4      SING  Y  N  34  
DGT  C8     N9      SING  Y  N  35  
DGT  C8     H8      SING  N  N  36  
DGT  N7     C8      DOUB  Y  N  37  
DGT  N7     C5      SING  Y  N  38  
DGT  C5     C6      SING  N  N  39  
DGT  C5     C4      DOUB  Y  N  40  
DGT  C6     N1      SING  N  N  41  
DGT  O6     C6      DOUB  N  N  42  
DGT  N1     C2      SING  N  N  43  
DGT  C2     N3      DOUB  N  N  44  
DGT  C2     N2      SING  N  N  45  
DGT  N2     HN2     SING  N  N  46  
DGT  N2     HN2A    SING  N  N  47  
DGT  C4     N3      SING  N  N  48  
DGT  N1     H16     SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DGT  SMILES            ACDLabs               10.04  "O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O"  
DGT  SMILES_CANONICAL  CACTVS                3.341  "NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P@](O)(=O)O[P@](O)(=O)O[P](O)(O)=O)O3"  
DGT  SMILES            CACTVS                3.341  "NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O3"  
DGT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@@](=O)(O)OP(=O)(O)O)O)N=C(NC2=O)N"  
DGT  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1C3CC(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)N=C(NC2=O)N"  
DGT  InChI             InChI                 1.03   "InChI=1S/C10H16N5O13P3/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(26-6)2-25-30(21,22)28-31(23,24)27-29(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1"  
DGT  InChIKey          InChI                 1.03   HAAZLUGHYHWQIW-KVQBGUIXSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DGT  "SYSTEMATIC NAME"  ACDLabs               10.04  "2'-deoxyguanosine 5'-(tetrahydrogen triphosphate)"  
DGT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DGT  "Create component"   1999-07-08  RCSB  
DGT  "Modify descriptor"  2011-06-04  RCSB  
##
